mRNA_H-elongata_contig64987.14087.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig64987.14087.1
Unique NamemRNA_H-elongata_contig64987.14087.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: D8LRA5_ECTSI (SEC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA5_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 7.750e-55
Identity = 164/434 (37.79%), Postives = 186/434 (42.86%), Query Frame = 1
Query:    1 RLFTQVQFELLFGAIFLRGLSQLRDKEE---HHGGEFRGPAIAPPTVGGGGQREPTR-----------SPPSSTGPSSPGVHV----RTLKDRELEMVLECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAYAAPDQLPRARVLCLASLSAALRHLHSRCVVRDGRDGGDKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTPGLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            R+  +VQ ELLFGA FLR LSQL+++ E       E +G                             S  ++ G S  G       R  +DRELEM LECLCD ++EPTFLVE+YVNYDCD QRSNLTE+LVAALADGAYA PD+L                                                                                                                                   GLDKAAVGAYLGEAG K V   G          G                         G   A G A   VY GDTEEFHAEVL AFV+TFDFRGQ +LASLRMFL +FRLPGEAQQIDRILHAFAQR +R+C+EAARGMLAS DVAYL +FSV+
Sbjct:  361 RVHLKVQLELLFGATFLRALSQLKEEGEDDLRQAQEEQGXXXXXXXXXXXXXXXXXXXXXXXXXREQFSREAAAGSSGVGAAAARGGRVFRDRELEMTLECLCDFLAEPTFLVEMYVNYDCDTQRSNLTEMLVAALADGAYAGPDRLS----------------------------------------------------------------------------------------------------------------------------------GLDKAAVGAYLGEAGAKRVNGRGXXXXXXXXXEGXXXXXXXXXXXXXXXXXXXXXXRTLGGVSARGAAAA-VYQGDTEEFHAEVLEAFVDTFDFRGQGILASLRMFLGAFRLPGEAQQIDRILHAFAQRVHRDCVEAARGMLASADVAYLLSFSVI 663          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A7S1TTF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTF5_9STRA)

HSP 1 Score: 159 bits (401), Expect = 6.820e-39
Identity = 132/351 (37.61%), Postives = 167/351 (47.58%), Query Frame = 1
Query:  226 ELEMVLECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAYAAPDQLPRA---RVLCLASLSAALRHLHSRCVVRDGRDGG-DKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPPYISREVKN------RKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTPGLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            E E+++E L DLM++  FL ++ VNYDCDL R++L   LV +LA G      Q P     +VLCL +L   +R L +    R G  G  D G D               G   GA+       AA +G G      +R ++       RK   A  A  F  KPR G   LQ  GL P   L    VA+FLRS PG+DK AVG YLG  G   V                                    + G  + VA           DT  FHA VLTAFV++FDFRGQ +L +LRMFL +FRLP EAQQIDR+L AFA+ A   C E  RG+ A+ DV YL +FS++
Sbjct:   27 EQEVIIEALGDLMADGHFLADVLVNYDCDLARADLFGPLVRSLA-GVVLDAHQRPGGAGVQVLCLRALLNGVRGLTAGLEDRKGEGGASDAGGD---------------GGKGGAS-------AAAEGEGAAAGEGNRRLRGIWAQRLRKEEFARGAELFHKKPRRGFNYLQGKGLLP-KPLTPTSVASFLRSAPGMDKRAVGEYLGTMGSVEV----------------------------------DTDTGMTTHVA-----------DTVAFHAAVLTAFVKSFDFRGQPILEALRMFLAAFRLPSEAQQIDRVLEAFAKEACESCAEGMRGLFATQDVPYLLSFSII 308          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: K3WAR7_GLOUD (SEC7 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR7_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 5.270e-30
Identity = 113/343 (32.94%), Postives = 163/343 (47.52%), Query Frame = 1
Query:  238 VLECLCDLMSEPTFLVELYVNYDCDLQRSNLT----ELLVAALADGAYAAPDQLPRARVLCLASLSA-ALRHLHSRCVVRDGRDGGDKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            +L+CL DL+SE T L +LYVNYDCD  RS+LT    ELL   +     A  +       L    +   ALR L +   V   R    +      S    G+++S    S   A+      +  D  G     +  + + RK         F  KP  G+K LQ     P   LD+  +AAF+RS P GL+K AVGAYLG  G                           + V  ++                   +  +++ DT +FH +VL  FV++F+F G++++A+LRMFL SFRLPGEAQQIDRIL+ F+ + Y +C +  R ++ S DVAYL +FS++
Sbjct:  390 ILDCLVDLLSEATLLPDLYVNYDCDGNRSDLTQNIFELLSQVVQHSHNACRETREEEHFLWAQGIGELALRGLFNALYVVYLRTQHKQSKPYSASQRPSGVSISSEDDSNDDALLEENPTSPRDSVGYATAEVLYKKRQRKKFFQHGIQEFNRKPIAGIKYLQQNTFLPT-PLDSKSLAAFMRSLPPGLNKNAVGAYLGAMG---------------------------KDVKEFE-------------------KAEIHEADTMDFHRDVLVDFVKSFNFEGENIVAALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRD--RFLMVSADVAYLLSFSLI 683          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A225WQG5_9STRA (SEC7 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQG5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.440e-29
Identity = 116/349 (33.24%), Postives = 166/349 (47.56%), Query Frame = 1
Query:  238 VLECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAYAAPDQLPRARVLCLASLSAALRHLHSRCVVRDGRDGGDKGLDEV-LSVSAGGLTVSGAGASTGAAMAVVA----------AAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            +L+CL DL++E T L +LYVNYDCD  R +LT+ L   L+  A        ++ V C  S   +   L ++ V      G    L  V L +    L +SG  +STG +   +             ++VD        +  + + RK         F  KP  G+K LQ     P   LD+  +A FLRS P GL+K AVG YLG  G                           + V  ++ T                    +++ DT +FH +VLT FV +F+F G+S++ +LRMFL SFRLPGEAQQIDRIL+ F+ + Y +C E  R ++AS DVAYL +FS++
Sbjct:  442 ILDCLVDLLAEATLLPDLYVNYDCDGNRCDLTQTLFELLSQAAQ-------QSHVACFESHEES-HFLWAQAVGEIALRGMFNALYVVHLRIQPETLDISG-DSSTGPSYEEITDDTLLADQEEQLSSVDSEEFASAEVLFKKRQRKKFFQHGIQEFNRKPLAGIKYLQQNTFLPT-PLDSISLATFLRSLPQGLNKNAVGVYLGAMG---------------------------KEVKAFEKTE-------------------IHEADTMDFHRDVLTNFVRSFNFEGESIVTALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRE--RFLMASVDVAYLLSFSLI 732          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A7S3YER2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YER2_HETAK)

HSP 1 Score: 124 bits (312), Expect = 2.520e-29
Identity = 79/195 (40.51%), Postives = 99/195 (50.77%), Query Frame = 1
Query:  664 ASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTPGLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            A AF   P++GL+ LQ  G+ P   L+    A FLR+ PGL K  +G YLG AG  A         + P T                                     +  Y GDTEEFH  VL AFV +FDF GQ LL +LRM+L +FRLPGEAQQIDR+L AFA  A+  C E  +G+ A+PD  +L  FS+V
Sbjct:    4 ARAFNAAPKKGLQFLQAQGMLP-DPLEPEAAARFLRTAPGLHKQKIGEYLGAAGRPA---------TDPATG------------------------------------KAAYRGDTEEFHQAVLQAFVRSFDFAGQPLLGALRMYLSAFRLPGEAQQIDRVLQAFADHAHARCREGRQGLFATPDACFLLCFSLV 152          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A662WDP0_9STRA (SEC7 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDP0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.350e-29
Identity = 131/443 (29.57%), Postives = 186/443 (41.99%), Query Frame = 1
Query:   13 QVQFELLFGAIFLRGLSQLRDKEEHHGGEF-RGPAIAPPTVGGGGQREPTRSPPSSTGPSSPGVHVRTLKDRELEMV----LECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAY----AAPDQLPRARVLCLASLSA-ALRHLHSRCVV---------------RDGRDGG-----DKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            ++Q E +F  +F   L       + +  EF RG  + PPT       +    P      +        +    L  +    L+CL DL++E T L +LYVNYDCD  R +LT+ L   L+  A     A  +    A  L   ++   ALR + +   V                DG D G     D+  D+ L V                           DG G     +  + + RK         F  KP  G+K LQ     P   LD+  +A FLRS P GL+K AVG YLG  G                           + V  ++ T                    +++ DT +FH +VLT FV +F+F G+S++ +LRMFL SFRLPGEAQQIDRIL+ F+ + Y +C E  R ++AS DVAYL +FS++
Sbjct:  184 KMQVEAIFNGVFSHTLHWTIANLDVNNPEFPRGSDVTPPTSAAAADGQANEKPVVVVDAAIDEFSGEMMSQSRLFSISFEILDCLVDLLAEATLLPDLYVNYDCDGNRCDLTQNLFELLSQVAQQSHVACFESHEEAHFLWAQAIGEIALRGMFNALYVVYLRTEQQQPKINSIADGGDSGGTPSDDESHDDTLLVDQ------------------EEQPRPADGAGFASADVLFKKRQRKKFFQHGIQEFNRKPLAGIKYLQQNTFLPT-PLDSSSLATFLRSLPQGLNKNAVGVYLGAMG---------------------------KEVKGFEKTE-------------------IHEADTMDFHRDVLTNFVHSFNFEGESIVTALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRE--RFLMASVDVAYLLSFSLI 559          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A7R9U5Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.340e-29
Identity = 87/206 (42.23%), Postives = 108/206 (52.43%), Query Frame = 1
Query:  631 VKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTPGLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            ++ RK  L   A+ F  KPR GL  LQ   L P   L    VA FLRS PGLDK AVG YLG+ G                                   T   +E GR + VA           DT  FHA  L +FV++FDF GQS+L SLRMFL +FRLP EAQ+IDR+L AFA+ AY  C E ++G+ A+PDV YL +FS++
Sbjct:   43 LRTRKAELGRGAAIFHKKPRLGLDYLQGRQLLP-KPLTPEAVALFLRSAPGLDKVAVGEYLGKMG-----------------------------------TVEVDETGRAAHVA-----------DTVAFHAATLESFVKSFDFSGQSILPSLRMFLAAFRLPHEAQEIDRVLEAFAKEAYASCEEGSQGLFATPDVPYLLSFSII 201          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: M4BIF1_HYAAE (SEC7 domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIF1_HYAAE)

HSP 1 Score: 129 bits (325), Expect = 1.080e-28
Identity = 112/344 (32.56%), Postives = 159/344 (46.22%), Query Frame = 1
Query:  238 VLECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAYAAPDQLPRARVLCLASLSAALRHLHSRCVVRDGRDGGDKGLDEVLSVSAGGLTVSGAGASTG------AAMAVVAAAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            + +CL DL++E T L ELYVNYDCD  R +LT+ L   L+  A        ++ V C  S   +   L ++ +      G    L  V + +   + V G   S+G      A +        + G  L       + + RK         F  KP  G+K LQ  G  P   LD+   A FLRS P  L K +VG YLG  G                                       +E+        G  +  +++ DT +FH +VLT FV +F+F G+S++ +LRMFL SFRLPGEAQQIDRIL+ F+ + Y +C E  R ++AS DVAYL +FS++
Sbjct:  354 IFDCLVDLLAEATLLTELYVNYDCDDNRCDLTQTLFGLLSQVAQ-------QSHVACFESHEES-HFLWAQAIGEIALRGLYNSLHVVYTRTQQNVPVLGGDDSSGSSDNEDALVIEEGEECLLAGAELVSAVALYKKQKRKKFFQRGIQEFNRKPLAGIKYLQQNGFLPI-PLDSKSFAMFLRSLPQDLSKTSVGVYLGAIG---------------------------------------KEV-------KGFEKSDIHEADTIDFHRDVLTNFVRSFNFEGESIVTALRMFLASFRLPGEAQQIDRILNVFSLQVYEQCRE--RFVMASMDVAYLLSFSLI 640          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: A0A8K1CB56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB56_PYTOL)

HSP 1 Score: 128 bits (321), Expect = 3.560e-28
Identity = 108/343 (31.49%), Postives = 157/343 (45.77%), Query Frame = 1
Query:  238 VLECLCDLMSEPTFLVELYVNYDCDLQRSNLT----ELLVAALADGAYAAPDQLPRARVLCLASLSA-ALRHLHSRCVVRDGRDGGDKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            +L+CL DL++EPT L +LYVNYDCD  RS+L     +LL  A+     A  +       +   ++   A++ + +   V   R        EV+  S G                        D T      +    + RK +       F  KP  G+K LQ     P   LD   +A FLRS P GL+KA+VG YLG  G                           + V  ++ T                    +++ DT EFH +VL  FV +F+F G+S++A+LRMFL SFRLPGEAQQIDRIL+ F+++ + +  +  R ++AS DVAYL +FS++
Sbjct:  407 ILDCLVDLLAEPTILPDLYVNYDCDGNRSDLMNSVFDLLSHAIEKSHAACQETEDEVHFMWARAMGELAMKGIFNSLYVLYTRGQHKPTPREVVDNSEG---------------------QHADATPAVTAEVLYRKRQRKKIFQRGIQEFNRKPLSGIKYLQQNSFLP-SPLDTKSLATFLRSLPPGLNKASVGIYLGAMG---------------------------KEVKDFEKTE-------------------IHEADTIEFHRDVLRCFVRSFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSEQVFEQSRD--RFLMASVDVAYLLSFSLI 679          
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Match: D0MS23_PHYIT (SEC7 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0MS23_PHYIT)

HSP 1 Score: 127 bits (319), Expect = 6.460e-28
Identity = 119/348 (34.20%), Postives = 164/348 (47.13%), Query Frame = 1
Query:  238 VLECLCDLMSEPTFLVELYVNYDCDLQRSNLTELLVAALADGAYAAPDQLPRARVLCLASLSAALRHLHSRCVVRDGRDGGDKGLDEV-LSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGTGLPPP-----YISREV----KNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAGEVAAFLRSTP-GLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEARATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVETFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARGMLASPDVAYLFTFSVV 1248
            +L+CL DL++E T L +LYVNYDCD  R +LT+ L   L+  A        ++ V C  S       L ++ V      G    L  V L        VSG G+S  +   +      VD     P      + S EV    + RK         F  KP  G+K LQ     P   LD+  +A FLRS P GL+K AVG YLG  G                                       +E+        G  +  +++ D+ +FH +VLT FV +F+F G+S++A+LRMFL SFRLPGEAQQIDRIL+ F+ + Y +C E  R ++AS DVAYL +FS++
Sbjct:  418 ILDCLVDLLAEATLLPDLYVNYDCDGNRCDLTQTLFELLSQTAQ-------QSHVACFESHEET-HFLWAQAVGEIALRGMFNALYVVHLRTHPETPAVSGDGSSGPSDEEMNEDTLLVDQETPSPTEDAEEFASAEVLFKKRQRKKFFQHGIQEFNRKPLAGIKYLQQNTFLPT-PLDSISLATFLRSLPQGLNKNAVGVYLGAMG---------------------------------------KEV-------KGFEKTDIHEADSMDFHRDVLTNFVRSFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRE--RFLMASVDVAYLLSFSLI 708          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64987.14087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA5_ECTSI7.750e-5537.79SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1TTF5_9STRA6.820e-3937.61Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K3WAR7_GLOUD5.270e-3032.94SEC7 domain-containing protein n=1 Tax=Globisporan... [more]
A0A225WQG5_9STRA2.440e-2933.24SEC7 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A7S3YER2_HETAK2.520e-2940.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662WDP0_9STRA4.350e-2929.57SEC7 domain-containing protein n=2 Tax=Nothophytop... [more]
A0A7R9U5Y8_9STRA6.340e-2942.23Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
M4BIF1_HYAAE1.080e-2832.56SEC7 domain-containing protein n=2 Tax=Hyaloperono... [more]
A0A8K1CB56_PYTOL3.560e-2831.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MS23_PHYIT6.460e-2834.20SEC7 domain-containing protein n=13 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64987contigH-elongata_contig64987:633..3105 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.5
Seed ortholog evalue2.9e-51
Seed eggNOG ortholog2880.D8LRA5
KEGG koko:K18442,ko:K18443
KEGG Pathwayko04144,map04144
GOsGO:0000137,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005829,GO:0006810,GO:0006888,GO:0006890,GO:0006891,GO:0006914,GO:0006996,GO:0007010,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0019898,GO:0019899,GO:0030029,GO:0030036,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0065007,GO:0065009,GO:0071840,GO:0097708,GO:0098772,GO:0098791
EggNOG free text desc.regulation of ARF protein signal transduction
EggNOG OGsCOG5307@1,KOG0928@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size1248
Cds size1248
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64987.14087.1prot_H-elongata_contig64987.14087.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig64987 633..3105 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931035.8984892-CDS-H-elongata_contig64987:632..7281622931035.8984892-CDS-H-elongata_contig64987:632..728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 633..728 -
1691679671.2788692-CDS-H-elongata_contig64987:632..7281691679671.2788692-CDS-H-elongata_contig64987:632..728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 633..728 -
1622931035.9216917-CDS-H-elongata_contig64987:1087..14141622931035.9216917-CDS-H-elongata_contig64987:1087..1414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 1088..1414 -
1691679671.2885044-CDS-H-elongata_contig64987:1087..14141691679671.2885044-CDS-H-elongata_contig64987:1087..1414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 1088..1414 -
1622931035.9400942-CDS-H-elongata_contig64987:1576..20831622931035.9400942-CDS-H-elongata_contig64987:1576..2083Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 1577..2083 -
1691679671.2964296-CDS-H-elongata_contig64987:1576..20831691679671.2964296-CDS-H-elongata_contig64987:1576..2083Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 1577..2083 -
1622931035.960056-CDS-H-elongata_contig64987:2425..25091622931035.960056-CDS-H-elongata_contig64987:2425..2509Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 2426..2509 -
1691679671.305278-CDS-H-elongata_contig64987:2425..25091691679671.305278-CDS-H-elongata_contig64987:2425..2509Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 2426..2509 -
1622931035.9748685-CDS-H-elongata_contig64987:2871..31051622931035.9748685-CDS-H-elongata_contig64987:2871..3105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 2872..3105 -
1691679671.3149505-CDS-H-elongata_contig64987:2871..31051691679671.3149505-CDS-H-elongata_contig64987:2871..3105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64987 2872..3105 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig64987.14087.1

>prot_H-elongata_contig64987.14087.1 ID=prot_H-elongata_contig64987.14087.1|Name=mRNA_H-elongata_contig64987.14087.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=416bp
RLFTQVQFELLFGAIFLRGLSQLRDKEEHHGGEFRGPAIAPPTVGGGGQR
EPTRSPPSSTGPSSPGVHVRTLKDRELEMVLECLCDLMSEPTFLVELYVN
YDCDLQRSNLTELLVAALADGAYAAPDQLPRARVLCLASLSAALRHLHSR
CVVRDGRDGGDKGLDEVLSVSAGGLTVSGAGASTGAAMAVVAAAAAVDGT
GLPPPYISREVKNRKHVLALAASAFCVKPREGLKLLQLGGLAPFGSLDAG
EVAAFLRSTPGLDKAAVGAYLGEAGPKAVTAVGGGGGSPPLTAGRGNEAR
ATRAVTVYDVTAASEEIGRGSSVAHGGARRGVYDGDTEEFHAEVLTAFVE
TFDFRGQSLLASLRMFLESFRLPGEAQQIDRILHAFAQRAYRECLEAARG
MLASPDVAYLFTFSVV
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mRNA from alignment at H-elongata_contig64987:633..3105-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig64987.14087.1 ID=mRNA_H-elongata_contig64987.14087.1|Name=mRNA_H-elongata_contig64987.14087.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2473bp|location=Sequence derived from alignment at H-elongata_contig64987:633..3105- (Himanthalia elongata Himel1 dioecious)
CGGTTGTTCACGCAGGTTCAATTCGAGCTCTTATTCGGCGCGATATTCTT GCGGGGTCTGTCGCAGCTGAGGGACAAAGAGGAGCACCACGGCGGGGAGT TCAGGGGTCCCGCGATCGCACCGCCTACTGTCGGGGGTGGGGGTCAACGA GAACCCACCAGGTCGCCTCCGAGTTCGACCGGGCCTTCTTCCCCGGGAGT CCACGTACGCACTTTGAAGGATCGGGAGCTCGAGGTGGGGCCATGTGTGT GGATTGTGCTTTTTTACTTATTTTACTTGGTGTCCGAGAAGGCGCGCCAA AAAATATTAGTGTGGCGTGTTTTATTTTTGTGTGCATGAGCGTCTCTTCC GCGTTTTGTCAACTGAACGAACGTCTTATAAAAAAAAAGAAATAAGAAAC ATTTTCGAACGAGGACTGATTTTTGCAGTCATCTCTCGGGGGAGGATCAG CGATTGATGAATCATCGCCAACGTTTTCAAAATTACTCTCGCCCCAATCG ATCGATCACCCGCCCCCTCCGCCCCCCCCCCCCGCCACGCACCCTACGCG GATCCCGCCGCCGCCTCGCCATGCGTCGGTGTTGTCTGTAATACAGATGG TGCTGGAGTGCCTGTGCGACTTAATGTCGGAGCCGACTTTTCTGGTGGAG TTGTACGTCAACTACGACTGTGACTTGCAGGTGGTCGTTGCCCTAAATGC AACGTCCCCGCCTCCCCTCCCTATAAAACCCGAAGTCGGTGTTTCGATTG GAGGGAACTCGCGCGCAGGCGGCAAGTCCATGTGCCGGATACATATATAT ATATATATATATATATGTGTGTGTGTTTCTCGTGGCATTGCCGAAGCGAG TGCCGTACTGCGCTCGATTTATGCTTATTTTGAAGTGTAGCCCGATCCCC GTGATTTTCCTTATTTTTCCCTCCCCTACTTTTCATTCACTTCATCGTGT TCGTGGGGCTTTGTCCTCTTGATCTTGACGTTTCTTGACGTTTGCTTGCT GTTGACCGAAACACCTTTTTAGCGATCAAATCTCACCGAGCTGCTGGTCG CGGCGCTCGCGGACGGTGCCTACGCGGCCCCGGACCAGCTACCCCGCGCG AGAGTCTTATGTCTCGCTTCGTTGTCGGCGGCCCTTCGACACCTTCACTC GCGCTGCGTCGTCCGCGACGGGCGCGATGGTGGCGACAAGGGACTCGACG AAGTGCTTTCAGTATCTGCTGGAGGACTAACTGTTTCAGGCGCCGGTGCT TCTACGGGGGCAGCGATGGCGGTTGTCGCCGCTGCGGCTGCGGTCGATGG CACCGGCCTGCCCCCACCGTATATCTCCCGCGAGGTGAAAAATCGTAAGC ACGTGCTGGCTTTGGCGGCGAGTGCGTTCTGCGTGAAACCACGTGAAGGG TTGAAGCTACTTCAGCTTGGAGGCTTGGCTCCGTTTGGCTCGCTGGATGC TGGAGAGGTAGCAGCGTTCCTTCGATCGACGCCAGGACTCGACAAGGCGG CCGTAGGGGCTTATCTTGGTGAAGCTGGGGTGAAAAAGGGTGGTGGCGCT ACCGGAAGCGCGGGGTTGAGCCCAGTGCCGCAAGGGGAAAGGCGGCTACG GCAAGAGCAGCCGTCGAGACACCTACCGGATTTTTATTTCGACCCGAAGT CGAAGAGGGATGCAGCCGAGACGCGGGATAGCGAAGGCGAGCCAAAGGCG GTGACGGCGGTGGGAGGAGGAGGAGGTTCTCCTCCCTTGACGGCAGGCCG GGGCAACGAGGCAAGGGCGACCAGAGCTGTTACTGTTTATGACGTCACTG CCGCTTCCGAGGAAATCGGAAGGGGTTCTTCGGTAGCCCACGGCGGTGCG AGAAGGGGAGTTTATGACGGTGATACCGAGGAATTCCACGCGGAGGTCTT AACCGCTTTCGTGGAGACGTTCGACTTTCGGGGGCAGAGCTTGCTGGCCT CACTGCGAATGTTTTTGGAGTCGTTCCGGCTCCCAGGAGAAGCGCAGCAG ATCGACCGCATCCTGCATGTGAGTGATATGTTTTCTCTCTCTTGTTCCCC CCCTCCACTCAACGGCTCCTTTGGATACACGGCATGACATTGGCCCGGAT ATTTTCCCGTCGAGACAAAGGCGAATGATACAAGTTGTAGATCTCGCCCG TTTTTTTACTTGAAATCACAAGACTTTGGGGAGGAGAATCTTTGGAGCTG TGCTAGACGATGGGCCAAACGATGTGCCGCCCCCAGGCCCAGCGAAAGAG CACGTCAAGGATACCACTCGTCGCGGGGGAGCTTGCGTTCAGTTGCTGTT GATGCTGATGTTGCTGCTGCCACCGCTCCCGCTGAAGTTACTATTTAATA TACATTTTCTTTCATCTTATCTGTCAGGCATTTGCCCAGCGAGCCTACCG AGAGTGTCTAGAGGCAGCGAGAGGGATGCTCGCTTCGCCGGATGTCGCTT ACCTTTTCACCTTCAGCGTCGTG
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Coding sequence (CDS) from alignment at H-elongata_contig64987:633..3105-

>mRNA_H-elongata_contig64987.14087.1 ID=mRNA_H-elongata_contig64987.14087.1|Name=mRNA_H-elongata_contig64987.14087.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2496bp|location=Sequence derived from alignment at H-elongata_contig64987:633..3105- (Himanthalia elongata Himel1 dioecious)
CGGTTGTTCACGCAGGTTCAATTCGAGCTCTTATTCGGCGCGATATTCTT
GCGGGGTCTGTCGCAGCTGAGGGACAAAGAGGAGCACCACGGCGGGGAGT
TCAGGGGTCCCGCGATCGCACCGCCTACTGTCGGGGGTGGGGGTCAACGA
GAACCCACCAGGTCGCCTCCGAGTTCGACCGGGCCTTCTTCCCCGGGAGT
CCACGTACGCACTTTGAAGGATCGGGAGCTCGAGCGGTTGTTCACGCAGG
TTCAATTCGAGCTCTTATTCGGCGCGATATTCTTGCGGGGTCTGTCGCAG
CTGAGGGACAAAGAGGAGCACCACGGCGGGGAGTTCAGGGGTCCCGCGAT
CGCACCGCCTACTGTCGGGGGTGGGGGTCAACGAGAACCCACCAGGTCGC
CTCCGAGTTCGACCGGGCCTTCTTCCCCGGGAGTCCACGTACGCACTTTG
AAGGATCGGGAGCTCGAGATGGTGCTGGAGTGCCTGTGCGACTTAATGTC
GGAGCCGACTTTTCTGGTGGAGTTGTACGTCAACTACGACTGTGACTTGC
AGATGGTGCTGGAGTGCCTGTGCGACTTAATGTCGGAGCCGACTTTTCTG
GTGGAGTTGTACGTCAACTACGACTGTGACTTGCAGCGATCAAATCTCAC
CGAGCTGCTGGTCGCGGCGCTCGCGGACGGTGCCTACGCGGCCCCGGACC
AGCTACCCCGCGCGAGAGTCTTATGTCTCGCTTCGTTGTCGGCGGCCCTT
CGACACCTTCACTCGCGCTGCGTCGTCCGCGACGGGCGCGATGGTGGCGA
CAAGGGACTCGACGAAGTGCTTTCAGTATCTGCTGGAGGACTAACTGTTT
CAGGCGCCGGTGCTTCTACGGGGGCAGCGATGGCGGTTGTCGCCGCTGCG
GCTGCGGTCGATGGCACCGGCCTGCCCCCACCGTATATCTCCCGCGAGGT
GAAAAATCGTAAGCACGTGCTGGCTTTGGCGGCGAGTGCGTTCTGCGTGA
AACCACGTGAAGGGTTGAAGCTACTTCAGCTTGGAGGCTTGGCTCCGTTT
GGCTCGCTGGATGCTGGAGAGGTAGCAGCGTTCCTTCGATCGACGCCAGG
ACTCGACAAGGCGGCCGTAGGGGCTTATCTTGGTGAAGCTGGGCGATCAA
ATCTCACCGAGCTGCTGGTCGCGGCGCTCGCGGACGGTGCCTACGCGGCC
CCGGACCAGCTACCCCGCGCGAGAGTCTTATGTCTCGCTTCGTTGTCGGC
GGCCCTTCGACACCTTCACTCGCGCTGCGTCGTCCGCGACGGGCGCGATG
GTGGCGACAAGGGACTCGACGAAGTGCTTTCAGTATCTGCTGGAGGACTA
ACTGTTTCAGGCGCCGGTGCTTCTACGGGGGCAGCGATGGCGGTTGTCGC
CGCTGCGGCTGCGGTCGATGGCACCGGCCTGCCCCCACCGTATATCTCCC
GCGAGGTGAAAAATCGTAAGCACGTGCTGGCTTTGGCGGCGAGTGCGTTC
TGCGTGAAACCACGTGAAGGGTTGAAGCTACTTCAGCTTGGAGGCTTGGC
TCCGTTTGGCTCGCTGGATGCTGGAGAGGTAGCAGCGTTCCTTCGATCGA
CGCCAGGACTCGACAAGGCGGCCGTAGGGGCTTATCTTGGTGAAGCTGGG
CCAAAGGCGGTGACGGCGGTGGGAGGAGGAGGAGGTTCTCCTCCCTTGAC
GGCAGGCCGGGGCAACGAGGCAAGGGCGACCAGAGCTGTTACTGTTTATG
ACGTCACTGCCGCTTCCGAGGAAATCGGAAGGGGTTCTTCGGTAGCCCAC
GGCGGTGCGAGAAGGGGAGTTTATGACGGTGATACCGAGGAATTCCACGC
GGAGGTCTTAACCGCTTTCGTGGAGACGTTCGACTTTCGGGGGCAGAGCT
TGCTGGCCTCACTGCGAATGTTTTTGGAGTCGTTCCGGCTCCCAGGAGAA
GCGCAGCAGATCGACCGCATCCTGCATCCAAAGGCGGTGACGGCGGTGGG
AGGAGGAGGAGGTTCTCCTCCCTTGACGGCAGGCCGGGGCAACGAGGCAA
GGGCGACCAGAGCTGTTACTGTTTATGACGTCACTGCCGCTTCCGAGGAA
ATCGGAAGGGGTTCTTCGGTAGCCCACGGCGGTGCGAGAAGGGGAGTTTA
TGACGGTGATACCGAGGAATTCCACGCGGAGGTCTTAACCGCTTTCGTGG
AGACGTTCGACTTTCGGGGGCAGAGCTTGCTGGCCTCACTGCGAATGTTT
TTGGAGTCGTTCCGGCTCCCAGGAGAAGCGCAGCAGATCGACCGCATCCT
GCATGCATTTGCCCAGCGAGCCTACCGAGAGTGTCTAGAGGCAGCGAGAG
GGATGCTCGCTTCGCCGGATGTCGCTTACCTTTTCACCTTCAGCGTCGTG
GCATTTGCCCAGCGAGCCTACCGAGAGTGTCTAGAGGCAGCGAGAGGGAT
GCTCGCTTCGCCGGATGTCGCTTACCTTTTCACCTTCAGCGTCGTG
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