mRNA_H-elongata_contig64846.14073.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A6H5JCT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT2_9PHAE) HSP 1 Score: 233 bits (595), Expect = 7.550e-72 Identity = 122/199 (61.31%), Postives = 141/199 (70.85%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGEDLTEEAAAAAAR 597
GHGGNVGPA+KAFA+F EQ + E+ + AR+KLI+WY G E+S LA+ELYG E GQHATPDEVA+TQH+FP S+K GV LDPAAIQVAKDLGGMTKR+ D +TGLSVMD QDFRRRFPDGRMFSNP LATPEHG RLL AAV+DA +AL KF +G+D+ EEA A A R
Sbjct: 205 GHGGNVGPAFKAFADFAAEQQQAREMXXXXXXXXXXXXXXXXDST--------------ARVKLISWYAGRESSTLAKELYGGEVGQHATPDEVAVTQHLFPESVKYGVELDPAAIQVAKDLGGMTKRIRDAETGLSVMDVQDFRRRFPDGRMFSNPALATPEHGRRLLEAAVRDATDALGKFLSGQDVVEEAEAKAKR 389
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: D8LCG6_ECTSI (Creatininase subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG6_ECTSI) HSP 1 Score: 231 bits (590), Expect = 1.640e-71 Identity = 118/192 (61.46%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGEDLTEE 576
GHGGNVGPA+KAFA+F E+ + E+E AR+KLI+WY G E+S LA+ELYG E GQHATPDEVA+TQH+FP S+K GV LDPAAIQVAKDLGGMTKR+ D +TGLSVMD QDFRRRFPDGRMFSNP LATPEHG RLL AAV+DA +AL KF +G+D+ EE
Sbjct: 129 GHGGNVGPAFKAFADFAAEKQQAREMEXXXXXXXXXXXXXXXXDS-------------TARVKLISWYAGRESSTLAKELYGGEVGQHATPDEVAVTQHLFPESVKSGVELDPAAIQVAKDLGGMTKRIKDAETGLSVMDVQDFRRRFPDGRMFSNPALATPEHGRRLLEAAVRDATDALGKFLSGQDVVEE 307
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A6P0TAQ0_9CYAN (Creatininase family protein n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TAQ0_9CYAN) HSP 1 Score: 109 bits (272), Expect = 7.680e-26 Identity = 66/186 (35.48%), Postives = 86/186 (46.24%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTG 558
GHGGN+ AFA+ L EGG R + L NWY G + +LA++LYG ++G HATP EVA+TQ+++P SIK P A +G + DFRR +PDGRM SNP LATPEHG R + AVK+ ++ KF G
Sbjct: 109 GHGGNIASLKAAFAQTYAHVTELG-------------------LEGGD----------RVQCHLANWYMGSQVQSLARQLYGNQEGSHATPSEVALTQYVYPDSIKQAPLSSPVA------------------SGYPIYSAVDFRRCYPDGRMGSNPALATPEHGKRFYDTAVKELSQSYLKFLHG 247
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A8J2YW98_9PROT (Amidase n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YW98_9PROT) HSP 1 Score: 108 bits (269), Expect = 2.270e-25 Identity = 55/125 (44.00%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 187 KLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGE 561
KL+NW+ P AS +A+EL+G + G HAT EV++TQ FP +IK GV LDP + G P DFR+R+PDGR+ SNPGLATP+ G RL +AAV D ++F E
Sbjct: 144 KLVNWWDSPAASVVARELFGDDDGSHATASEVSVTQWAFPDTIKRGVTLDPPRAPAGRFYG-----------------PADFRKRYPDGRIGSNPGLATPDKGKRLYDAAVPDITNMYREFVAAE 251
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: B4WK12_SYNS7 (Creatininase subfamily n=2 Tax=Cyanobacteria TaxID=1117 RepID=B4WK12_SYNS7) HSP 1 Score: 105 bits (263), Expect = 1.670e-24 Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query: 175 RARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKF 549
R R K+ NWYG +AL+++LYG ++G HATP EVA+TQ ++P IK +L PA +G S+ +P DFR +PDGRM SNP LATPEHG + AVKD F
Sbjct: 138 RIRCKIANWYGSKAIAALSEQLYGNQEGSHATPSEVALTQFVYPNDIKQA-SLSPAIAP----------------SGRSIYNPTDFRAFYPDGRMGSNPKLATPEHGKQFYEVAVKDLTNGYLSF 245
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: Q31QH2_SYNE7 (Uncharacterized protein n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=Q31QH2_SYNE7) HSP 1 Score: 105 bits (261), Expect = 3.210e-24 Identity = 68/184 (36.96%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEF-KVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKF 549
GHGGN+ AFAEF V DR + EP+ R R L NW+ P + LA+ELYG E+G HATP EVA+TQ I+P SIK P ++V + ++ DFRRR+PDGRM SNP LATPEHG + +AV + ++ + F
Sbjct: 109 GHGGNIATVRAAFAEFYAVAGDR-----------------RCPEPD-------------RLRCHLANWFMVPAVTKLARELYGDEEGSHATPSEVALTQFIYPDSIKTA----PLTVEV--------------HSSHAIYAADDFRRRYPDGRMGSNPALATPEHGQQFYESAVAELSQSYQAF 244
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: UPI0016864DB6 (creatininase family protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016864DB6) HSP 1 Score: 105 bits (261), Expect = 3.420e-24 Identity = 67/188 (35.64%), Postives = 90/188 (47.87%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGED 564
GHGGN+ AFA+F R E+ ++ + R L NW+ LAQELYGKE+G HATP EVA+TQ ++P +IK P + +VA +G + DFRR +PDGRM SNP LATPEHG + AV++ E+ +KF GE+
Sbjct: 109 GHGGNIATLKAAFAQFYY---RCSELNLTHAAEI--------------------------RCHLANWFMCRSVYKLAQELYGKEEGSHATPSEVALTQFVYPEAIKTA----PLSPEVA--------------SGFPIYSAADFRRSYPDGRMGSNPDLATPEHGKQFYELAVQELSESYRKF-VGEE 248
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A846A9P0_9CYAN (Creatininase family protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A9P0_9CYAN) HSP 1 Score: 104 bits (260), Expect = 4.800e-24 Identity = 58/139 (41.73%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 148 INVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGED 564
+++ + + R ++ NWY LA+ELYG ++G HATP EVA+TQ+++P +IK L+P QVA G + + DFRR +PDGRM SNP LATPEHG RL AAVKD + KF +D
Sbjct: 129 LDLNMAQADQVRCQVANWYMCGPVMQLARELYGSQEGSHATPSEVALTQYVYPQAIKTA-KLEP---QVAP-------------AGHRIYNAVDFRRHYPDGRMGSNPDLATPEHGQRLYEAAVKDLSNSYLKFIAPDD 250
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A7T5JE98_9CYAN (Amidase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A7T5JE98_9CYAN) HSP 1 Score: 103 bits (258), Expect = 9.070e-24 Identity = 69/187 (36.90%), Postives = 87/187 (46.52%), Query Frame = 1
Query: 1 GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKFQTGE 561
GHGGNV AFAE L E ++ P+ G+ R + NWY LA+ELYG ++G HATP EVA+TQ+++P SIK V LDP G + + DFR+ +PDGRM SNP LATPEHG +L AAVKD F + E
Sbjct: 109 GHGGNVATLKAAFAETYAT---LAEAQL---------------PQAGA-----------VRCAVANWYMCRSVYTLAKELYGDQEGSHATPSEVALTQYLYPDSIKR-VELDPPVAP----------------RGFPIYNAADFRQHYPDGRMGSNPALATPEHGQQLYEAAVKDLTNDYLSFLSAE 249
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Match: A0A2E5KT42_9PROT (Amidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KT42_9PROT) HSP 1 Score: 103 bits (258), Expect = 9.070e-24 Identity = 59/150 (39.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query: 100 FPTAYLQTGEPEGGSGINVGIGLLPRARLKLINWYGGPEASALAQELYGKEKGQHATPDEVAMTQHIFPASIKDGVALDPAAIQVAKDLGGMTKRVTDEKTGLSVMDPQDFRRRFPDGRMFSNPGLATPEHGGRLLNAAVKDAVEALKKF 549
F Y QT GG PR R L WY P +LA++ YG ++G HATP EVA+TQ++FP +IK +L +T G S D +D+RRRFPDGRM S+P LATPEHG L A +D + F
Sbjct: 121 FQEVYAQTSIDGGGDNR-------PRVRCLLRQWYQRPRVQSLAKKFYGNKEGYHATPSEVAVTQYLFPDAIKTA------------ELPELTS-----PGGFSFTDAEDYRRRFPDGRMASDPSLATPEHGKELFELAAEDLAADYRDF 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64846.14073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64846.14073.1 >prot_H-elongata_contig64846.14073.1 ID=prot_H-elongata_contig64846.14073.1|Name=mRNA_H-elongata_contig64846.14073.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp GHGGNVGPAWKAFAEFKVEQDRLDEVEMSATTDFPTAYLQTGEPEGGSGIback to top mRNA from alignment at H-elongata_contig64846:358..2503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64846.14073.1 ID=mRNA_H-elongata_contig64846.14073.1|Name=mRNA_H-elongata_contig64846.14073.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2146bp|location=Sequence derived from alignment at H-elongata_contig64846:358..2503+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64846:358..2503+ >mRNA_H-elongata_contig64846.14073.1 ID=mRNA_H-elongata_contig64846.14073.1|Name=mRNA_H-elongata_contig64846.14073.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig64846:358..2503+ (Himanthalia elongata Himel1 dioecious)back to top |