mRNA_H-elongata_contig64695.14062.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: D7G3X0_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X0_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.490e-56 Identity = 107/148 (72.30%), Postives = 114/148 (77.03%), Query Frame = 1
Query: 1 VQCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAVEV 444
+QCAATERA LAGL+KVKLM+EPEAAALAY LDKGGDE+ILVFDLGGGTFDVSVLEVGGGIAEVIAT GDSQLGGDDFDQA I EWL E+T GGGDPRS PV R+LIE ARAARERLS+ ET VEV
Sbjct: 383 IQCAATERAATLAGLDKVKLMREPEAAALAYGLDKGGDELILVFDLGGGTFDVSVLEVGGGIAEVIATAGDSQLGGDDFDQA------------------ITEWLFDEITSLGGGDPRSSPVATRRLIEKARAARERLSNASETEVEV 512
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A835Z756_9STRA (Hsp70 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z756_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.220e-44 Identity = 85/147 (57.82%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAVEV 444
QC ATERAG GLEKVK+M+EPEAAALAY L DE++LVFDLGGGTFDVSVL +GGG+ EV+AT GD LGGDDFD A IA+W+ EV +AGG DPR +PV MR L A+AAR RL+++ ETA+ V
Sbjct: 153 QCLATERAGLAVGLEKVKIMREPEAAALAYGLSMKDDELVLVFDLGGGTFDVSVLHLGGGVVEVVATSGDPHLGGDDFDLA------------------IADWMVSEVVKAGGADPRGNPVLMRTLTHLAQAARVRLTNEKETAITV 281
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A4D9CZP8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZP8_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.400e-38 Identity = 83/150 (55.33%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDK--GGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGD-PRSDPVHMRKLIEAARAARERLSSQPETAVEV 444
QCAATERAG LAGL+++KL++EPEAAALAY LD+ G DE+I+VFDLGGGTFDVSVLEVG G+ EV++T GD+ LGG+DFD+ +A+WL GE + GG P+SD RKL+EAA AR RLS ET V +
Sbjct: 597 QCAATERAGALAGLQRIKLLREPEAAALAYGLDRMLGEDELIMVFDLGGGTFDVSVLEVGDGVVEVLSTFGDATLGGNDFDKR------------------VADWLVGEYRKQHGGQGPQSDRTSQRKLMEAAEGARVRLSQASETEVRI 728
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: K0E505_9FLAO (DnaK (Fragment) n=4 Tax=Flavobacterium TaxID=237 RepID=K0E505_9FLAO) HSP 1 Score: 125 bits (313), Expect = 2.630e-33 Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGG-DEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
Q AT+ AG++AGLE ++++ EP AAALAY LDK G D+ I V+DLGGGTFD+S+LE+G G+ EV++T GD+ LGGDDFDQ VI +WL+ E A G D R DP+ +++L EAA A+ LS+ +T +
Sbjct: 10 QRQATKEAGQIAGLEVMRIINEPTAAALAYGLDKQGKDQKIAVYDLGGGTFDISILELGDGVFEVLSTNGDTHLGGDDFDQ------------------VIIDWLANEFNSAEGIDLRKDPMALQRLKEAAEKAKIELSASAQTEI 137
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A3B9QLH6_9BACT (Chaperone protein DnaK n=4 Tax=unclassified Candidatus Bipolaricaulota TaxID=1046990 RepID=A0A3B9QLH6_9BACT) HSP 1 Score: 131 bits (329), Expect = 8.780e-33 Identity = 72/146 (49.32%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 1 VQCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
+Q AT+ AGK+AGLE ++++ EP AAALAY LD+GG++ ILV+DLGGGTFDVS+LE+G G+ EV+AT GD+QLGGDDFD+ I +WL E + G D R+DP M++L +AA A+ LSS+ ET +
Sbjct: 132 LQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDRGGEQKILVYDLGGGTFDVSILEIGEGVFEVVATDGDTQLGGDDFDRR------------------IMDWLIEEFKKDTGIDLRNDPAAMQRLRDAAEQAKIELSSRMETRI 259
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A662EZI0_9BACT (Molecular chaperone DnaK (Fragment) n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A662EZI0_9BACT) HSP 1 Score: 126 bits (317), Expect = 1.610e-32 Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
Q AT+ AGK+AGLE ++++ EP AAALAY LDK ++ ILV+DLGGGTFDVS+LE+G G+ EV+AT GD+QLGGDDFD+ I +WL E G D DP M++L +AA AA++ LS++ ET +
Sbjct: 135 QRQATKDAGKIAGLEVMRIINEPTAAALAYGLDKAEEQTILVYDLGGGTFDVSILEIGDGVFEVVATDGDTQLGGDDFDRR------------------IMDWLVDEFRADTGIDLTKDPSAMQRLKDAAEAAKKELSARMETTI 261
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A7C2YG25_9BACT (Chaperone protein DnaK n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A7C2YG25_9BACT) HSP 1 Score: 130 bits (327), Expect = 1.680e-32 Identity = 72/146 (49.32%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 1 VQCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
+Q AT+ AGK+AGLE ++++ EP AAALAY LDKG ++ ILV+DLGGGTFDVS+L++G G+ EV+AT GD+QLGGDDFD+ I +WL+ E G D R DP M++L +AA AA++ LSS+ E V
Sbjct: 132 LQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKGKEQRILVYDLGGGTFDVSILDIGEGVFEVVATDGDTQLGGDDFDRR------------------IVDWLASEFKADTGIDVRGDPQAMQRLGDAAEAAKKELSSRMEARV 259
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A7C5QB72_9BACT (Molecular chaperone DnaK (Fragment) n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A7C5QB72_9BACT) HSP 1 Score: 126 bits (317), Expect = 4.110e-32 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
Q AT+ AG +AGLE ++++ EP AAALAY LDK D+ ILV+DLGGGTFDVS+LE+G G+ +V+AT GD+ LGGDDFDQ I +WL+ E + G D +DP M++L +AA AA++ LSS+ ET +
Sbjct: 131 QRQATKDAGSIAGLEVMRIINEPTAAALAYGLDKERDQTILVYDLGGGTFDVSILEIGDGVFDVLATDGDTHLGGDDFDQR------------------IIDWLAEEFRKDTGIDLTNDPSAMQRLKDAAEAAKKELSSRMETTI 257
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: A0A357B651_9BACT (Molecular chaperone DnaK (Fragment) n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A357B651_9BACT) HSP 1 Score: 129 bits (323), Expect = 5.270e-32 Identity = 72/145 (49.66%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
Q AT+ AGK+AGLE +++ EP AA+LAY LDK G++ ILV+DLGGGTFDVS+LE+G G+ EV+AT GD+QLGGDDFD+ I +WL+ E G D RSDP ++L +AA AA+ LSS+ ET +
Sbjct: 131 QRQATKDAGKIAGLEVQRIINEPTAASLAYGLDKEGEQTILVYDLGGGTFDVSILEIGEGVFEVLATDGDAQLGGDDFDKR------------------IIDWLADEFRRDTGIDLRSDPSAKQRLKDAAEAAKMELSSRMETTI 257
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Match: K0E3I3_9FLAO (DnaK (Fragment) n=2 Tax=Flavobacterium gelidilacus TaxID=206041 RepID=K0E3I3_9FLAO) HSP 1 Score: 121 bits (304), Expect = 5.970e-32 Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 1
Query: 4 QCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGG-DEIILVFDLGGGTFDVSVLEVGGGIAEVIATGGDSQLGGDDFDQARKGLARLFSSTALSRRDVIAEWLSGEVTEAGGGDPRSDPVHMRKLIEAARAARERLSSQPETAV 438
Q AT+ AG++AGL+ ++++ EP AAALAY LDK G D+ I V+DLGGGTFD+S+LE+G G+ EV++T GD+ LGGDDFDQ VI +WL+ E G D R DP+ ++++ EAA A+ LSS ET +
Sbjct: 10 QRQATKEAGEIAGLKVMRIINEPTAAALAYGLDKKGTDQKIAVYDLGGGTFDISILELGDGVFEVLSTNGDTHLGGDDFDQ------------------VIIDWLADEFKAEEGIDLRDDPMSLQRIKEAAEKAKIELSSGAETEI 137 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64695.14062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64695.14062.1 >prot_H-elongata_contig64695.14062.1 ID=prot_H-elongata_contig64695.14062.1|Name=mRNA_H-elongata_contig64695.14062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp VQCAATERAGKLAGLEKVKLMKEPEAAALAYSLDKGGDEIILVFDLGGGTback to top mRNA from alignment at H-elongata_contig64695:288..1960+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64695.14062.1 ID=mRNA_H-elongata_contig64695.14062.1|Name=mRNA_H-elongata_contig64695.14062.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1673bp|location=Sequence derived from alignment at H-elongata_contig64695:288..1960+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64695:288..1960+ >mRNA_H-elongata_contig64695.14062.1 ID=mRNA_H-elongata_contig64695.14062.1|Name=mRNA_H-elongata_contig64695.14062.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig64695:288..1960+ (Himanthalia elongata Himel1 dioecious)back to top |