mRNA_H-elongata_contig64595.14053.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: D7G9E2_ECTSI (Possible vitamin K epoxide reductase, plastid protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E2_ECTSI) HSP 1 Score: 105 bits (261), Expect = 5.940e-26 Identity = 45/55 (81.82%), Postives = 52/55 (94.55%), Query Frame = 3
Query: 3 KQAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
KQ MSK+KY+ECS+RGVD+Q D+CKAA +PGFPTWDIDGKLYPGEQ+LEELEEIV
Sbjct: 259 KQVMSKVKYIECSNRGVDNQVDMCKAADIPGFPTWDIDGKLYPGEQTLEELEEIV 313
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A6H5K243_9PHAE (VKc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K243_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.360e-25 Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 3
Query: 3 KQAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
K+AMSK+KY+ECS+RGVD+Q D+CKAA +PGFPTWDIDGKLYPGEQ+LEELEEIV
Sbjct: 348 KEAMSKVKYIECSNRGVDNQVDMCKAADIPGFPTWDIDGKLYPGEQTLEELEEIV 402
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: M2X8Y0_GALSU (VKc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X8Y0_GALSU) HSP 1 Score: 82.8 bits (203), Expect = 2.530e-17 Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 3
Query: 6 QAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEI 164
+A KI+YVECS G DSQ +LC+ VPG+PTW+IDG+LYPGEQS+EELEE+
Sbjct: 323 EAFEKIEYVECSKNGRDSQYNLCREKDVPGYPTWEIDGELYPGEQSVEELEEL 375
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A6T6NYM0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NYM0_9RHOD) HSP 1 Score: 78.2 bits (191), Expect = 8.330e-17 Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 3
Query: 3 KQAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
K+AM KI YVECS RG +SQA LCK K+ G+P W+IDGKL+ GEQS+E+ +EI+
Sbjct: 90 KEAMQKIDYVECSERGRNSQAALCKEKKIAGYPAWEIDGKLFFGEQSMEDFDEIL 144
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A1Z5JS18_FISSO (VKc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS18_FISSO) HSP 1 Score: 80.9 bits (198), Expect = 1.050e-16 Identity = 34/55 (61.82%), Postives = 46/55 (83.64%), Query Frame = 3
Query: 3 KQAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
K+AM+ I Y+ECS G+++Q LCK VPG+PTW+I+GKLYPGE++L+ELEEIV
Sbjct: 288 KEAMAMIPYIECSRDGLNAQTKLCKEKDVPGYPTWEINGKLYPGEKTLDELEEIV 342
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A7S3P7K1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7K1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.430e-16 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 3
Query: 3 KQAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
K+AM +I Y+ECS G +SQ LCK ++PG+PTW+I+GKL+PGEQ+L+EL EIV
Sbjct: 349 KEAMQRIPYIECSREGTNSQVSLCKEKQIPGYPTWEINGKLFPGEQALDELFEIV 403
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A7S2A2R7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2R7_TRICV) HSP 1 Score: 79.0 bits (193), Expect = 1.440e-16 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 3
Query: 6 QAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
+AM ++ YVECS G++SQ +CK VPG+PTW+I G+LYPGE LEELEEIV
Sbjct: 175 EAMERVTYVECSKFGLNSQTKMCKERDVPGYPTWEIGGRLYPGEMELEELEEIV 228
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A6T8M9F0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8M9F0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.880e-16 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 3
Query: 6 QAMSKIKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
+A +K+KYVEC+ +SQ +CK VPG+PTW+I+GKLYPGEQ +EEL++IV
Sbjct: 99 EAFAKVKYVECAKEAKNSQTKVCKDRDVPGYPTWEINGKLYPGEQDMEELKDIV 152
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A7S4VPD6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPD6_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.000e-16 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 3
Query: 21 IKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
+ YVEC G++SQ LCKA +PG+PTW+IDGKLYPGEQ L+ELE+IV
Sbjct: 357 VPYVECDREGINSQGKLCKAMDIPGYPTWEIDGKLYPGEQELDELEDIV 405
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Match: A0A7S2R3K6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3K6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.320e-16 Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 3
Query: 21 IKYVECSSRGVDSQADLCKAAKVPGFPTWDIDGKLYPGEQSLEELEEIV 167
I YVECS G D+Q LCK +PG+PTW+I GKLYPGEQSLEELEEIV
Sbjct: 213 ITYVECSKDGFDAQNKLCKDKNLPGYPTWEIKGKLYPGEQSLEELEEIV 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64595.14053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64595.14053.1 >prot_H-elongata_contig64595.14053.1 ID=prot_H-elongata_contig64595.14053.1|Name=mRNA_H-elongata_contig64595.14053.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp ASRRCQKSNTWNARVAGWTVKPIYVKPPRSPVSRRGILTGSFTQANKAWKback to top mRNA from alignment at H-elongata_contig64595:2723..3440- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64595.14053.1 ID=mRNA_H-elongata_contig64595.14053.1|Name=mRNA_H-elongata_contig64595.14053.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=718bp|location=Sequence derived from alignment at H-elongata_contig64595:2723..3440- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64595:2723..3440- >mRNA_H-elongata_contig64595.14053.1 ID=mRNA_H-elongata_contig64595.14053.1|Name=mRNA_H-elongata_contig64595.14053.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at H-elongata_contig64595:2723..3440- (Himanthalia elongata Himel1 dioecious)back to top |