mRNA_H-elongata_contig64551.14045.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: D7FII4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII4_ECTSI) HSP 1 Score: 320 bits (820), Expect = 1.680e-101 Identity = 181/240 (75.42%), Postives = 195/240 (81.25%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPSTGK 720
+VSFTEFY+M TGGN XXXXXXXXXXXXX A TAPLGQNVVQQRNKKKQA+++F+RDNNIKPESIKKAYKRFQATD DS+GMIDYTEFCEIMQVDPSPQCEG+FQLF F+++LTNFAGASKDDKLKFAFMIFDEDGNGVITKQE L RILKANHMAQ+EAEVARKTDTIMAQADKDGDG++TFDEFVIVCKKFPNILFPSTGK
Sbjct: 540 QVSFTEFYEMVTGGNSXXXXXXXXXXXXXXXXXXXXXXXXXATTAPLGQNVVQQRNKKKQAMDDFARDNNIKPESIKKAYKRFQATDKDSTGMIDYTEFCEIMQVDPSPQCEGLFQLFDGDRSGQIDVREFMISLTNFAGASKDDKLKFAFMIFDEDGNGVITKQE----------------LARILKANHMAQSEAEVARKTDTIMAQADKDGDGVVTFDEFVIVCKKFPNILFPSTGK 763
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A6H5JD51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD51_9PHAE) HSP 1 Score: 284 bits (726), Expect = 1.490e-92 Identity = 163/221 (73.76%), Postives = 178/221 (80.54%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFD 663
+VSFTEFY+M TGGN P XXXXXXXXXXXXX +A TAPLGQNVVQQRNKKKQA+++F+RDNNIKPESIKKAYKRFQATD DS+GMIDYTEFCEIMQVDPSPQCEG+FQLF F+++LTNFAGASKDDKLKFAFMIFDEDGNGVITKQE L RILKANHMAQ+EAEVARKTDTIMAQADKDGDG++TFD
Sbjct: 122 QVSFTEFYEMVTGGNSPXXXXXXXXXXXXXXXXXXXXXXXLATTAPLGQNVVQQRNKKKQAMDDFARDNNIKPESIKKAYKRFQATDKDSTGMIDYTEFCEIMQVDPSPQCEGLFQLFDGDRSGQIDVREFMISLTNFAGASKDDKLKFAFMIFDEDGNGVITKQE----------------LARILKANHMAQSEAEVARKTDTIMAQADKDGDGVVTFD 326
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A835ZJR9_9STRA (Putative calcineurin subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJR9_9STRA) HSP 1 Score: 276 bits (705), Expect = 4.370e-87 Identity = 151/248 (60.89%), Postives = 174/248 (70.16%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAP-LGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXX--FLVALTNFAGASK-----DDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPSTGK 720
+VSF EFY M TGG PPPGLG + +A T G NVVQQRN KK AL++F+RDNNIKPESIKKAYKRFQATD DS+GMIDYTEFCE++QVDPSPQCEGVFQLF F+++L +++GA+K +DKLKFAFM+FDEDGNGVITK E L RILKANHMA ++AEVARK DTIM QADKDGDG++TFDEFV+V KKFPNILFPS GK
Sbjct: 275 QVSFDEFYGMVTGGRKPPPGLGGAARPAAGTAPSMGGTMVLAGTMQQAGPNVVQQRNAKKAALDDFARDNNIKPESIKKAYKRFQATDKDSTGMIDYTEFCEVLQVDPSPQCEGVFQLFDYDRIRSGQIDVREFMISLAHYSGATKASQHREDKLKFAFMVFDEDGNGVITKAE----------------LVRILKANHMATSDAEVARKADTIMNQADKDGDGVVTFDEFVLVAKKFPNILFPSAGK 506
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A8J2S3Z5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3Z5_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.990e-82 Identity = 155/237 (65.40%), Postives = 175/237 (73.84%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+VSFTEF++M TGG PP GLG G + +A P GQ+VV RN KK AL+EF+RDNN+KPESIKKAYKRFQATD D SGMIDYTEFCE++Q DPSPQ E + XXXXXXXXXXXX ++AL+NF GA KDDKLKFAFMIFDEDGNGVITK E LTRIL+ANHMA +AEVARK DTIM QADKDGDG++TFDEFVIV KKFPNILFP+
Sbjct: 360 QVSFTEFFEMVTGGRQPPAGLGGGGRMGAP-------GASASAAPPTGQSVVAARNAKKAALDEFARDNNLKPESIKKAYKRFQATDKDKSGMIDYTEFCEVLQCDPSPQGERLXXXXXXXXXXXXXXXXXMIALSNFTGAGKDDKLKFAFMIFDEDGNGVITKGE----------------LTRILRANHMASCDAEVARKADTIMQQADKDGDGVVTFDEFVIVSKKFPNILFPA 573
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A6S8C5R6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C5R6_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.000e-81 Identity = 154/240 (64.17%), Postives = 175/240 (72.92%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPSTGK 720
+VSF EF+ M TGG PPPGLG V A P GQ+VV RN KK AL++F+RD N+KPESIKK+YKRFQATD D SGMIDYTEFCEI+QVDPSPQ E + XXXXXXXXXXXX ++AL+NF GA+KDDKLKFAFMIFDEDGNGVITK E LTRIL+ANHMA ++AEVARK +TIM QADKDGDG++TFDEFVIV KKFPNILFP+ K
Sbjct: 471 QVSFPEFFDMVTGGRQPPPGLGNSASNVNVAGVKGVKNTTAGAQPPTGQSVVAARNAKKSALDDFARDCNLKPESIKKSYKRFQATDKDKSGMIDYTEFCEILQVDPSPQGERLXXXXXXXXXXXXXXXXXMIALSNFTGATKDDKLKFAFMIFDEDGNGVITKGE----------------LTRILRANHMASSDAEVARKAETIMQQADKDGDGVVTFDEFVIVSKKFPNILFPAMSK 694
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A7S2SI02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI02_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.130e-81 Identity = 165/237 (69.62%), Postives = 182/237 (76.79%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+V+F EFY+M T G PPPGLG XXXXXXXXXXXX P G +VV QRN KK AL+EF+RDNN+KPESIKKA+KRFQATD D SGMIDYTEFCEI+QVDPSPQ E V XXXXXXXXXXXX ++AL NF GA KDDKLKF+FMIFDEDGNGVITK E LTRILKANHMA +AEVARK DTIM QADKDGDG+++FDEFVIV KKFPNILFP+
Sbjct: 209 QVAFDEFYEMVTNGKSPPPGLGGXXXXXXXXXXXXXXXXP-----PTGASVVAQRNAKKTALDEFARDNNLKPESIKKAFKRFQATDKDKSGMIDYTEFCEILQVDPSPQGEKVXXXXXXXXXXXXXXXXXMIALANFTGAGKDDKLKFSFMIFDEDGNGVITKDE----------------LTRILKANHMASNDAEVARKADTIMTQADKDGDGVVSFDEFVIVSKKFPNILFPA 424
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A7S3M8S8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8S8_9STRA) HSP 1 Score: 256 bits (653), Expect = 5.460e-80 Identity = 144/237 (60.76%), Postives = 166/237 (70.04%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+VS+ EFY M TGG P GLG XXXXXX GQNVVQ RN KK AL EF+++NN+KPESIKKAYKRFQATD D SG++DYTEFCEI+QVDP+P CE VF+L+ FL+A++N+ GA K+DKLKFAFM FDEDGNGVITK E L +ILK+NHMA +AEVARK DTIMAQADKDGDG+ITFDEFVIV KKFPNILFP+
Sbjct: 228 QVSWDEFYSMVTGGKKAPAGLGIEAKGGAXXXXXXXXXXXT------GQNVVQARNAKKAALEEFAKENNLKPESIKKAYKRFQATDKDKSGVVDYTEFCEILQVDPAPLCETVFRLYDYDKTGQIDAREFLIAVSNYTGAGKEDKLKFAFMSFDEDGNGVITKAE----------------LLKILKSNHMASHDAEVARKADTIMAQADKDGDGVITFDEFVIVSKKFPNILFPA 442
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A2D4BEP0_PYTIN (Calcineurin subunit B, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEP0_PYTIN) HSP 1 Score: 257 bits (657), Expect = 2.050e-79 Identity = 155/237 (65.40%), Postives = 180/237 (75.95%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+VSF EFY M T G PPPGLG XXXXXXX +TA +G +Q RN++K AL EF+RDN IKPES+KKAYKRFQATD D SG IDY+EFCE++QVDPSPQCE VF XXXXXXXXXXXXF++AL+NF+GA K++KLKFAFM+FDEDGNGVIT+QE L +ILKANHMA +EAEVARK DTIM+Q DKDGDG+I+FDEF IV KKFPNILFP+
Sbjct: 326 QVSFDEFYAMVTKGKQPPPGLGVPAAGGXXXXXXXXXX----STAAVGAQAIQLRNERKTALEEFARDNGIKPESVKKAYKRFQATDKDGSGQIDYSEFCEVLQVDPSPQCEKVFXXXXXXXXXXXXXXXFMIALSNFSGAEKEEKLKFAFMVFDEDGNGVITRQE----------------LMKILKANHMASSEAEVARKADTIMSQGDKDGDGVISFDEFSIVSKKFPNILFPA 542
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: A0A6G0WVU7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVU7_9STRA) HSP 1 Score: 246 bits (629), Expect = 3.460e-79 Identity = 143/239 (59.83%), Postives = 169/239 (70.71%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLG--QNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+V+F EFY+M TGG PP GL V A AA AP + +Q RN++K AL EF++DNNIK ES+KKA+KRFQATD D SG IDYTEFCEIM VDPSPQCE +FQ XXXXXXXXX FL+AL+NF GA K++KLKFAFM+FD+DGNGV++K E L +ILKANHMA E+EVARK DTIM+Q DKDGDG+I+FDEF IV KKFPNILFP+
Sbjct: 12 QVAFDEFYKMVTGGKEPPAGL-----------YRPVSDDAAAAAAPTSGAASSIQLRNERKNALEEFAQDNNIKAESVKKAFKRFQATDKDGSGQIDYTEFCEIMLVDPSPQCEKLFQXXXXXXXXXXXVREFLIALSNFCGAEKEEKLKFAFMVFDDDGNGVLSKME----------------LMKILKANHMASNESEVARKADTIMSQGDKDGDGVISFDEFAIVSKKFPNILFPA 223
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Match: G4Z244_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z244_PHYSP) HSP 1 Score: 254 bits (649), Expect = 6.540e-79 Identity = 146/237 (61.60%), Postives = 171/237 (72.15%), Query Frame = 1
Query: 1 KVSFTEFYQMATGGNLPPPGLGXXXXXXXXXXXXXVVGIAVAATAPLGQNVVQQRNKKKQALNEFSRDNNIKPESIKKAYKRFQATDNDSSGMIDYTEFCEIMQVDPSPQCEGVFQLFXXXXXXXXXXXXFLVALTNFAGASKDDKLKFAFMIFDEDGNGVITKQEARNTPHPPTPIITLGCLTRILKANHMAQTEAEVARKTDTIMAQADKDGDGIITFDEFVIVCKKFPNILFPS 711
+VSF EFY M T G PPPGLG G A A G +Q RN++K AL EF+RDN IKPES+KKAYKRFQATD D SG IDY+EFCE++QVDPSPQCE VF XXXXXXXXXXXXF++AL+NF GA K++KLKFAF++FDEDGNGVIT+QE L +ILKANHMA +EAEV+RK DTIM+Q DKDGDG+I+FDEF +V KKFPNILFP+
Sbjct: 265 QVSFDEFYAMVTKGKQPPPGLGVVATSPEK------AGAAGPGGAATGAQAIQLRNQRKVALEEFARDNGIKPESVKKAYKRFQATDKDGSGQIDYSEFCEVLQVDPSPQCEKVFXXXXXXXXXXXXXXXFMIALSNFTGAEKEEKLKFAFLVFDEDGNGVITRQE----------------LIKILKANHMASSEAEVSRKADTIMSQGDKDGDGVISFDEFSVVSKKFPNILFPA 479 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64551.14045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64551.14045.1 >prot_H-elongata_contig64551.14045.1 ID=prot_H-elongata_contig64551.14045.1|Name=mRNA_H-elongata_contig64551.14045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp MATGGNLPPPGLGGTTTTTANTTGGGVVGIAVAATAPLGQNVVQQRNKKKback to top mRNA from alignment at H-elongata_contig64551:187..2850+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64551.14045.1 ID=mRNA_H-elongata_contig64551.14045.1|Name=mRNA_H-elongata_contig64551.14045.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2664bp|location=Sequence derived from alignment at H-elongata_contig64551:187..2850+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64551:187..2850+ >mRNA_H-elongata_contig64551.14045.1 ID=mRNA_H-elongata_contig64551.14045.1|Name=mRNA_H-elongata_contig64551.14045.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig64551:187..2850+ (Himanthalia elongata Himel1 dioecious)back to top |