mRNA_H-elongata_contig64463.14034.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: D7FQD9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD9_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.030e-48 Identity = 91/121 (75.21%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KVMFP VE MFRSDIKTMKDFCALAQPEHLVML+EVEKQFLTEFDFREEAKNLELVR NMR+A+ R VVVP+A+ +TPS LIMEYVPGK LVDA+QEH +NVA RGMT +L
Sbjct: 182 VKVMFPGVETMFRSDIKTMKDFCALAQPEHLVMLKEVEKQFLTEFDFREEAKNLELVRNNMRKAWSR-------HVVVPEAFHATPSTLIMEYVPGKTLVDAIQEHFQNVAAARGMTVDEL 295
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A7S3YD06_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD06_HETAK) HSP 1 Score: 115 bits (289), Expect = 4.890e-31 Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KVM+P VE MFR DI TMK FCALAQPEHL L E+EKQFLTEFD+R EA+NL V NMRRA+ K VVVP+ +++ VLIM YV G LVD L+ + E +A +G T + L
Sbjct: 4 VKVMYPGVEGMFRGDIATMKRFCALAQPEHLPALGEIEKQFLTEFDYRREAENLRKVGDNMRRAWGHK-------VVVPEPIWASEEVLIMSYVEGVKLVDGLRRNAEALAWLKGTTAEAL 117
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: W4H7P7_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7P7_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.290e-26 Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAY--FSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KV FP EA FR+DI T+K F A+AQP HL L E+EKQFLTEFD+R EA NL+LVR N+ AS + VVPK+Y T VL+MEY+ G+ L+DA+ +H E VA E G+T +L
Sbjct: 211 VKVQFPEAEANFRNDITTIKRFAAVAQPAHLPFLNEIEKQFLTEFDYRREADNLDLVRANLA------ASPYARKFVVPKSYPDLCTKEVLVMEYLQGRKLIDAIYDHFEIVASELGVTVDEL 327
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A024GVY5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVY5_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.930e-26 Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KV P+ E FRSD+KT+K FC QP HL L+EVEKQF+TEF++ EEA NLE+VR N++++ V PK F T VL+MEY+ GK L+ +QEH+E +A+ERGM+ ++L
Sbjct: 86 VKVQHPDAEHFFRSDMKTIKAFCRYFQPAHLPYLEEVEKQFMTEFNYHEEALNLEMVRDNLKKS----PFASRVAVPTPKIEFCTKEVLVMEYLRGKKLLVGIQEHLECIAKERGMSLEEL 202
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A024GUN7_9STRA (Uncharacterized protein (Fragment) n=9 Tax=Albugo candida TaxID=65357 RepID=A0A024GUN7_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.000e-26 Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KV P+ E FRSD+KT+K FC QP HL L+EVEKQF+TEF++ EEA NLE+VR N++++ V PK F T VL+MEY+ GK L+ +QEH+E +A+ERGM+ ++L
Sbjct: 86 VKVQHPDAEHFFRSDMKTIKAFCRYFQPAHLPYLEEVEKQFMTEFNYHEEALNLEMVRDNLKKS----PFASRVAVPTPKIEFCTKEVLVMEYLRGKKLLVGIQEHLECIAKERGMSLEEL 202
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A0G4FAN8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FAN8_VITBC) HSP 1 Score: 110 bits (275), Expect = 8.740e-26 Identity = 60/124 (48.39%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAY--FSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDLL 366
+KV FP+ E MFR DIKT +DFC L QP+HL L+EVEKQF+TEFD+R EA+NL+ + N+ + RK VV+P+ + T VL+MEYVPG L DA++ ++A R MT Q+L+
Sbjct: 185 VKVQFPDAERMFRIDIKTAQDFCRLVQPDHLPFLKEVEKQFMTEFDYRREAENLDEIADNVLPVWGRK-------VVIPRPFKHLCTREVLVMEYVPGTKLADAIKRQYTHIAASRNMTLQELI 301
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A6G0XWF5_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWF5_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.260e-25 Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAY--FSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+K+ FP+ E FR+DI T+K FC++AQP H+ L E+EKQF+TEFD+R EA NL VR N+ R+ R + VVPK Y T VL+MEY+ GK L+D + EH E +ARER T + L
Sbjct: 211 VKIQFPDAEKHFRNDITTIKTFCSVAQPAHMPQLNEIEKQFMTEFDYRREADNLSEVRGNIERSPFR------DRFVVPKPYKELCTKDVLVMEYLKGKTLIDGINEHFETIARERHTTVEAL 327
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A8K1CNX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNX3_PYTOL) HSP 1 Score: 108 bits (271), Expect = 2.730e-25 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRA-YPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KV P+ E FR DIKT+KDFC L QP HL L+EVEKQF+TEFD+ EEAKNL VR N+ ++ Y RK + + P T VL+ME++ G+ L+D +Q+H E +A ++G+T Q L
Sbjct: 176 VKVQHPDAETFFRWDIKTIKDFCRLFQPVHLPYLEEVEKQFMTEFDYNEEAKNLSTVRSNIAKSPYARKIA-----IPAPLTELCTKEVLVMEFLKGRKLLDGIQDHFEAIAADKGVTVQFL 292
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: K3WDH8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDH8_GLOUD) HSP 1 Score: 107 bits (268), Expect = 7.130e-25 Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRA-YPRKASTEDTQVVVPKAYFSTPSVLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KV P+ E FR DIKT++DFC L QP HL L+EVEKQF+TEFD+ EEAKNLE VR N+ ++ Y K + + PK + T VL+ME++ G+ L+D + EH+E +A ++G+T + L
Sbjct: 177 VKVQHPDAEGFFRWDIKTIQDFCRLFQPAHLPYLEEVEKQFMTEFDYYEEAKNLETVRANIAKSPYASKIAIPE-----PKFEYCTKEVLVMEFLKGRKLLDGIHEHLEAIAADKGVTVEFL 293
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Match: A0A7S0WVX5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WVX5_9CHLO) HSP 1 Score: 104 bits (260), Expect = 2.330e-24 Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 1 LKVMFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNLELVRKNMRRAYPRKASTEDTQVVVPKAYFSTPS--VLIMEYVPGKMLVDALQEHMENVARERGMTPQDL 363
+KVM+P VE +FR D+K++KDF LAQP+HL L E+E+QFLTEFD+R+EA+NLE VR+N+ + + VV+PK S VL+M+++PGK L D ++EH +A + G T ++L
Sbjct: 219 VKVMYPGVERLFRWDLKSLKDFVWLAQPQHLPELDEIERQFLTEFDYRKEAQNLEKVRQNVMPKWGHR-------VVIPKPVLDLCSEQVLVMQHLPGKKLTDGIREHYRKIASQVGRTLEEL 334 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64463.14034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64463.14034.1 >prot_H-elongata_contig64463.14034.1 ID=prot_H-elongata_contig64463.14034.1|Name=mRNA_H-elongata_contig64463.14034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MFPNVEAMFRSDIKTMKDFCALAQPEHLVMLQEVEKQFLTEFDFREEAKNback to top mRNA from alignment at H-elongata_contig64463:1263..1859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64463.14034.1 ID=mRNA_H-elongata_contig64463.14034.1|Name=mRNA_H-elongata_contig64463.14034.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=597bp|location=Sequence derived from alignment at H-elongata_contig64463:1263..1859+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64463:1263..1859+ >mRNA_H-elongata_contig64463.14034.1 ID=mRNA_H-elongata_contig64463.14034.1|Name=mRNA_H-elongata_contig64463.14034.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig64463:1263..1859+ (Himanthalia elongata Himel1 dioecious)back to top |