mRNA_H-elongata_contig6437.14024.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6437.14024.1
Unique NamemRNA_H-elongata_contig6437.14024.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6437.14024.1 vs. uniprot
Match: D8LTU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU9_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 3.220e-111
Identity = 337/989 (34.07%), Postives = 465/989 (47.02%), Query Frame = 1 
Query:  580 MTLLKTDNYSGLVVGVNGTETFFWEL---RSPQKNYPRTAKTPDKAISSPFVDNIGGARRGNQNGKNVFYTYIGSVLDLQSSEVTALSVRSPLLARGLANGRIVLWR*VHPEQGRLRRTIISVVEAHGTFSVLDLHLLR----------------AEGSRRVMASR----STSVHCNDAG----DWYVVSGGADRTVIHWSLLGFVGDTREVSE---QENATLRKTGVYEVTRKSAAA----ITASNDRQYHREDSAIDRSLSVTHVMVVQFPAYEAPSPIHT---TITAAAEAVAAAASITLMRQKPN-QAQSEDTTALLCEYGNAARPSKEGGNLGSKHVCLAVSGGLISIMEIVEPLWHVGWTGSRSK-ELT--------KEREILCMTRMPHYSLTDKGTESKLNLGHGSIPGFVVMSEGGWLGWYQDGIRNVELVSQTELTSPDKSN--NSLSVRAKPTC--IVPMLASPRKPRHGEQVSTLNASMRMDITGRPPSSSSQTRALVSRQDIEVVQNIIVGYSDGSIALAPMYLVASPSDSC--------------------RQLNLPRAATKIMTRVDMDGGMAVEAGITALCSISGHLVVVGDSEGRMSLWETSAS-PATGSPLLWEDKAAHSGPIIAIHRVQESPRVITTPTNPANLVD----NLPLLPSPKPHEWVVSAGSGGAIRVWKLQSRRQPEVARSNRPV----GLEFFATVMTNLSITSFSCFLVSPPG-------------GGSGGRGHGRIDD---KTEPYYLSSKDTENNTALGKRQMEKQGGQQRLYCVVGSDKGFVQASGIDFSEGRAVTGQMMWSQKIHNRPVTVMD----------------ACGIDGWAIRSPGVPTSH--------YVNTAKKKRD------------SPSVAMMFGQTRDEG------NHAPGCLILSGSLDRSLCVFRARYDEDFYLLRRLNLGCIPRGLPSALFVELQAEAGAD 3132
            M +L+ D  SGLVVG+NGTE F W L        + P      +  + +    ++GG   G   G+   Y Y+GS+ DL SSEVTA+ VR PLLA GLANGRI LWR        L+R +++V +AH  F +L L LLR                A G   + +S+    S+ V  N  G    DW ++SGG D TV H S++G +   RE +    +    LR  G YE +RK+ +A    ++A++  +      A +R   V+H+M ++  A E      +   T  AAA+      S+   +   N QA ++ ++    E   +AR  K GG    +  C+AVSGGLIS++E+VEPL HVGW G  +  +LT        K+RE+  M R+P  S+     E  ++    +   F+VM + GW G         ELVS+  LT+P  S+   + +  +  TC  + P+ A  R     + V     S +       P S+                 I+VGYSDGSIA A +    +PS S                     R +   R               A+EA ITALC +S  LVV GDS+GR++LW TS++ P  GSPLLWED+ AH G +IAI RV+ES     TP+ PA+ +           + +P EWVVS GSGG IRVW + SR  P  A   R      GLEF AT++TN SI SFSC L+ P G             GG+GG G  + +D   +        +   +    G  Q E  GG  RLYCV GSD GFVQA  +       V GQ +WSQK H+  VT MD                  G++  +  +  VP  H         V+  K+K +            SP      G+    G      N    CL+LS +LDR+LCVFRAR+    +LLRRLN+ C PRGLP ALFV +  E  ++
Sbjct:    1 MEILEIDADSGLVVGLNGTEAFLWRLPPLHQTSGDVPMRGSVGEVEVPTLPNTSLGGDANGGFEGRR--YQYLGSMPDLHSSEVTAIGVREPLLATGLANGRIFLWRINASSSCSLKRIVLAVFDAHDAFPILTLRLLRSCGASDQGVTSPSSPAAPGVDELKSSKGVDASSGVINNGRGGSSEDWSIISGGGDGTVAHLSVVG-LASAREAASGVAEAGVELRMIGDYEASRKTRSAHYTSVSATSGDRVGNGRFAANRRPGVSHIMAIRLSAGEEAGVFGSGVDTRRAAADTTGRGTSLCTGKGGENFQAPAKGSS--WAEVIASAR-GKSGGGGSGRDFCVAVSGGLISVLEVVEPLQHVGWVGRETTADLTAGVYGGGGKKREVARMMRVP--SVWRSAREEDIDC---AADDFMVMCDDGWFGXXXXXXGRFELVSRLTLTAPGGSHFAEATAAGSDTTCFAVCPIPAVGRNTSANDSV----VSCKYAFNAGAPESA----------------RIVVGYSDGSIACASL---PAPSSSTNHPLPTFGTGSRHHERERGERTVRRLRXXXXXXXXXXXXXXXAIEAAITALCPLSAPLVVAGDSDGRLALWTTSSALPPDGSPLLWEDRNAHRGVVIAIERVKES-----TPSTPASGLSCNGSTHAAHRTSRPREWVVSVGSGGEIRVWNVPSR-WPGGAAVGRGRDTGGGLEFRATLLTNSSICSFSCALLLPLGDACIGDGGGINGCGGNGGFGQVQCEDHEREKSQEQGEKRRCRSGARPGAGQAEATGG--RLYCVAGSDNGFVQAWELSLDGEEGVGGQPLWSQKTHDAAVTKMDMWELYPSDPDGPKARKTTGLNISSSTTTSVPEIHAKGPREALVVHHKKEKENNAGLESNEAPPPSPPHCQAVGKGGRRGAAKLVENSVTECLVLSAALDRTLCVFRARHGRALHLLRRLNVPCSPRGLPGALFVGIPVERASE 947
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BLAST of mRNA_H-elongata_contig6437.14024.1 vs. uniprot
Match: A0A6H5JZI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI3_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 1.310e-99
Identity = 321/1002 (32.04%), Postives = 453/1002 (45.21%), Query Frame = 1 
Query:  580 MTLLKTDNYSGLVVGVNGTETFFWELRSPQKNYPRTAKTPDK-AISSPFVDNIGGARRGNQNGKNVF----YTYIGSVLDLQSSEVTALSVRSPLLARGLANGRIVLWR*VHPEQGRLRRTIISVVEAHGTFSVLDLHLLRAEGSRRVMASRSTSVHCNDAG------------------------DWYVVSGGADRTVIHWSLLGFVGDTREVSE---QENATLRKTGVYEVTRKSAAAITASND-RQYHREDS-------------AIDRSLSVTHVMVVQFPAYEAPSPIHTTITAAAEAVAAAASITLMRQKPNQAQSEDTTALLCEYGN-----AARPSKEGGNLGSKHVCLAVSGGLISIMEIVEPLWHVGWTGSRSKE-LT------KEREILCMTRMPHYSLTDKGTESKLNLGHGSIPGFVVMSEGGWLGWYQDGIRNVELVSQTELTSPDKSNNSLSVRA--KPTC--IVPMLASPRKPRHGEQVSTLNASMRMDITGRPPSSSSQTRALVSRQDIEVVQNIIVGYSDGSIALAPMYLVASPSDSC--------------------RQLNLPRAATKIMTRVDMDGGMAVEAGITALCSISGHLVVVGDSEGRMSLWETSAS-PATGS--PLLWEDKAAHSGPIIAIHRVQESPRVITTPTNPANLVDNLPLLP-SPKPHEWVVSAGSGGAIRVWKLQSRRQPEVARSNR----PVGLEFFATVMTNLSITSFSCFLVSPPG-------------GGSGGRGHGRIDDKTEPYYLSSKDTENNTALGKRQMEKQGGQQ----------RLYCVVGSDKGFVQASGIDFSEGRAVTGQMMWSQKIHNRPVTVMDACGI------DGWAIRSPGVPTSHYVNTAKKK--RDSPSVAMMFGQTRDEGNHA----------------------------------PGCLILSGSLDRSLCVFRARYDEDFYLLRRLNLGCIPRGLPSALFVELQAE 3120
            M +L+ D  SGLVVG+NGTE F W L   Q+    +   P + ++    V  +    RG  +  +VF    Y Y+GS+ DL SSEVTA+ VR PLLA GLANGRI LW         L+R +++V +AH  F +L L LLR+ G+     +  +S    D G                        DW ++SGG D TV+H S++G +   RE +    +    LR  G YEV  ++     AS   R  H                 A +R   V+H+M ++  A E    + + + +      AAA  T     P+  +  +      +  +     A+   K GG    K  C+AVSGGLIS++E+VEPL HVGW G  +   LT      K+RE+  + R+P  S+     E  ++     +   +VM + GW G         ELVS+  LT+P   +++ +  A    TC  + P+    R     + V +   S+           S   R             IIVGYSDGSIA AP+    +PS S                     R +   R A             A+EA ITALC +   LVV GDS+GR++LW TS++ P  G   PLLWED+ AH G +IAI RV+E+   ++TP    +   N      + +P E VVS GSGG IRVW + SR  P  A + R      GLEF AT++TN SI SFSC L+ P G             GG+GG      +D+        K ++    +G+++  + G +           RLYCV GSD GFVQA  +       V G+ +WSQK H+  VT MD   +      D  A ++ G+  S    T+  +     P  A++  Q +++ NHA                                    CL+LS +LDR+LCVFRAR+    +LLRRLN+ C  RGLP ALFV +  E
Sbjct:    1 MEILEIDADSGLVVGLNGTEAFLWRLPLHQQT---SVDVPMRGSVGEVEVPTLPDTTRGG-DANDVFEGRRYQYLGSMPDLHSSEVTAIGVREPLLATGLANGRIFLWS--------LKRIVLAVFDAHDAFPILTLRLLRSRGASHQGVTPPSSPVAPDVGELNLCTGVDESSDVINNXXXXXXEDWSIMSGGGDGTVVHLSVVG-LASAREAASGVAEAGVELRMIGDYEVRNQTIGGRGASRKTRSAHYPSGSATSGDRVGNGRFAANRRPGVSHIMAIRLSAGEEAGVLGSGVYSRG----AAADTTGRGMSPSTGKGGENFQAPAKGSSWAEVIASARGKSGGGGSGKDFCVAVSGGLISVLEVVEPLQHVGWVGRETTAALTSGGSGGKKREVARIARVP--SVWRSAREEDVDCAADDL---MVMCDDGWFGXXXXXXGRFELVSRLTLTAPGSRHSAEATAAGSDTTCFAVCPIPVVSRNTSANDSVVSCKYSLYAGA-------SEPAR-------------IIVGYSDGSIACAPL---PAPSSSTNHPLPTFGTGSRHHEGARGERTVRRLRRAGXXXXXXXXXXXAAIEAAITALCPLLAPLVVAGDSDGRLALWTTSSALPPDGRQVPLLWEDRNAHRGVVIAIKRVEEA--TLSTPAAGLSCDGNTHAARRTSRPRERVVSVGSGGEIRVWNVPSR-WPGGAAAGRGRDTEGGLEFCATLLTNSSICSFSCALLLPSGDACIGNGGGINGCGGNGGFCQVHCEDQER------KKSQEQGTMGEKRRCRPGARPGAGQAEATGWRLYCVAGSDNGFVQAWELSLDGEEGVGGEPLWSQKTHDAAVTEMDVWELYPSDPDDPKARKTTGLNISSSTTTSVSEIHAKGPRAALVVNQQKEKENHAGLESNEAPPRPPPHCPAVGKGGRRGAAKLIENSSTECLVLSAALDRTLCVFRARHGRGLHLLRRLNVPCSLRGLPGALFVGIPVE 948
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6437.14024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTU9_ECTSI3.220e-11134.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZI3_9PHAE1.310e-9932.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6437contigH-elongata_contig6437:1310..7274 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons11
Model size3132
Cds size2124
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6437.14024.1prot_H-elongata_contig6437.14024.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6437 3790..7274 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931029.6332824-UTR-H-elongata_contig6437:1309..15091622931029.6332824-UTR-H-elongata_contig6437:1309..1509Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 1310..1509 +
1691679668.5382774-UTR-H-elongata_contig6437:1309..15091691679668.5382774-UTR-H-elongata_contig6437:1309..1509Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 1310..1509 +
1622931029.6688786-UTR-H-elongata_contig6437:1882..20631622931029.6688786-UTR-H-elongata_contig6437:1882..2063Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 1883..2063 +
1691679668.5479527-UTR-H-elongata_contig6437:1882..20631691679668.5479527-UTR-H-elongata_contig6437:1882..2063Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 1883..2063 +
1622931029.6891658-UTR-H-elongata_contig6437:2309..24531622931029.6891658-UTR-H-elongata_contig6437:2309..2453Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 2310..2453 +
1691679668.5584657-UTR-H-elongata_contig6437:2309..24531691679668.5584657-UTR-H-elongata_contig6437:2309..2453Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 2310..2453 +
1622931029.7119849-UTR-H-elongata_contig6437:2602..27091622931029.7119849-UTR-H-elongata_contig6437:2602..2709Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 2603..2709 +
1691679668.5689466-UTR-H-elongata_contig6437:2602..27091691679668.5689466-UTR-H-elongata_contig6437:2602..2709Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 2603..2709 +
1622931029.7260087-UTR-H-elongata_contig6437:3107..33681622931029.7260087-UTR-H-elongata_contig6437:3107..3368Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 3108..3368 +
1691679668.5787983-UTR-H-elongata_contig6437:3107..33681691679668.5787983-UTR-H-elongata_contig6437:3107..3368Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 3108..3368 +
1622931029.7419338-UTR-H-elongata_contig6437:3674..37891622931029.7419338-UTR-H-elongata_contig6437:3674..3789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 3675..3789 +
1691679668.5897043-UTR-H-elongata_contig6437:3674..37891691679668.5897043-UTR-H-elongata_contig6437:3674..3789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6437 3675..3789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931029.7716804-CDS-H-elongata_contig6437:3789..39601622931029.7716804-CDS-H-elongata_contig6437:3789..3960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 3790..3960 +
1691679668.6035402-CDS-H-elongata_contig6437:3789..39601691679668.6035402-CDS-H-elongata_contig6437:3789..3960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 3790..3960 +
1622931029.783925-CDS-H-elongata_contig6437:4256..47011622931029.783925-CDS-H-elongata_contig6437:4256..4701Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 4257..4701 +
1691679668.6196766-CDS-H-elongata_contig6437:4256..47011691679668.6196766-CDS-H-elongata_contig6437:4256..4701Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 4257..4701 +
1622931029.7983563-CDS-H-elongata_contig6437:4815..49431622931029.7983563-CDS-H-elongata_contig6437:4815..4943Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 4816..4943 +
1691679668.6317725-CDS-H-elongata_contig6437:4815..49431691679668.6317725-CDS-H-elongata_contig6437:4815..4943Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 4816..4943 +
1622931029.8132186-CDS-H-elongata_contig6437:5299..57901622931029.8132186-CDS-H-elongata_contig6437:5299..5790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 5300..5790 +
1691679668.641879-CDS-H-elongata_contig6437:5299..57901691679668.641879-CDS-H-elongata_contig6437:5299..5790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 5300..5790 +
1622931029.8271759-CDS-H-elongata_contig6437:6001..65571622931029.8271759-CDS-H-elongata_contig6437:6001..6557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 6002..6557 +
1691679668.6519094-CDS-H-elongata_contig6437:6001..65571691679668.6519094-CDS-H-elongata_contig6437:6001..6557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 6002..6557 +
1622931029.8540328-CDS-H-elongata_contig6437:6941..72741622931029.8540328-CDS-H-elongata_contig6437:6941..7274Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 6942..7274 +
1691679668.6618052-CDS-H-elongata_contig6437:6941..72741691679668.6618052-CDS-H-elongata_contig6437:6941..7274Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6437 6942..7274 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6437.14024.1

>prot_H-elongata_contig6437.14024.1 ID=prot_H-elongata_contig6437.14024.1|Name=mRNA_H-elongata_contig6437.14024.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=708bp
MASRSTSVHCNDAGDWYVVSGGADRTVIHWSLLGFVGDTREVSEQENATL
RKTGVYEVTRKSAAAITASNDRQYHREDSAIDRSLSVTHVMVVQFPAYEA
PSPIHTTITAAAEAVAAAASITLMRQKPNQAQSEDTTALLCEYGNAARPS
KEGGNLGSKHVCLAVSGGLISIMEIVEPLWHVGWTGSRSKELTKEREILC
MTRMPHYSLTDKGTESKLNLGHGSIPGFVVMSEGGWLGWYQDGIRNVELV
SQTELTSPDKSNNSLSVRAKPTCIVPMLASPRKPRHGEQVSTLNASMRMD
ITGRPPSSSSQTRALVSRQDIEVVQNIIVGYSDGSIALAPMYLVASPSDS
CRQLNLPRAATKIMTRVDMDGGMAVEAGITALCSISGHLVVVGDSEGRMS
LWETSASPATGSPLLWEDKAAHSGPIIAIHRVQESPRVITTPTNPANLVD
NLPLLPSPKPHEWVVSAGSGGAIRVWKLQSRRQPEVARSNRPVGLEFFAT
VMTNLSITSFSCFLVSPPGGGSGGRGHGRIDDKTEPYYLSSKDTENNTAL
GKRQMEKQGGQQRLYCVVGSDKGFVQASGIDFSEGRAVTGQMMWSQKIHN
RPVTVMDACGIDGWAIRSPGVPTSHYVNTAKKKRDSPSVAMMFGQTRDEG
NHAPGCLILSGSLDRSLCVFRARYDEDFYLLRRLNLGCIPRGLPSALFVE
LQAEAGAD
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mRNA from alignment at H-elongata_contig6437:1310..7274+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6437.14024.1 ID=mRNA_H-elongata_contig6437.14024.1|Name=mRNA_H-elongata_contig6437.14024.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5965bp|location=Sequence derived from alignment at H-elongata_contig6437:1310..7274+ (Himanthalia elongata Himel1 dioecious)
ATGGCGTCGCTTCGGATCGCATTCAGTTCACTTGCATTTAAAAATCAGCT
TCGCGATGGCGTTGCGCCGATCGAAGCATGCGCCTTCAACAACCCTCGGC
GCGAGTTTCTGGCCGTCGACGCCACCGCGCTGAGAGTATGGAGCTTGAAG
AGGGAAATAAAGGCTATCATGACACCGAATTTAAGGCGAGGAAGGGATAA
GTATGTCGAACGTGTGCTGAACCACGACTATCTGGTATTTTGGCACACTT
TCCACGCATTTCTTCCACGTATATGTATCCTCTATATTATACATAAAGTC
TTTCTGAACTCATATGTCGCACATGATTTTTGGTGCTACACTATCTCTAT
TTTATTTAAGGATACACACCGCATGGAAACCCGTATATCATGTGCCATGC
ATTTTTGGTAACTCTTACACTGCCGAATACCGGATGGAATACATCGTCCA
AGCCTCATTAGAGTATGTCCACAACGCACCCCGACGCCATATCCAGTTCC
ACGATGACTGCATCAATATGCTCGTCAGTATTATAAAGTATAGGTGGTTC
ATCCTGTTTACCCCCACGCGCAGTGGACCAGCTATTGCGGCGTTCTGTGT
AGAGCGAAACGACATCTACATTGTTGTGTACCGAGGGAGAAAGCGAGACA
AAGTGGGCGTTGCCCAAGTAACACCATCATCGATGATGCCTAGTTGCGTC
GTGTACGACGGAAGGCTTCGTCTCTTGAATCGATTCATTCCATGCAAGTG
CGAGGTTCGTGGGTTTTGCCATGGGTTAATCACTTTGAGGTGATGTCTTA
TGATGTTAAGCGCACCTGCATTCGTTTGGTGAGCAGCCAGTGCCCGCCAT
ATCAGACACTTTTCTCAACCCTGACAATGTGTGTCGTGGTGGTTACTCTG
ATATATGTGATCACTACACACACACCATAACATAGCTCAAGTACTTTTAT
AGCTTTGCCCTACCTGATTGGCGAGTGTGGTAAACCGCGCATGTATGCAG
GTGGTGTCGGCCACGTTTTCCCATTTGACAGAGGCCCTCCTTGTCACCAG
GCATGACGGAATCATTAGCCTTTTCCGTGTTTCGCCTCAGAAACGGGCAC
CGACCCCTACCCGACAGTCAACTACGGCAGTTAAAAGTGTTCAGGTGATG
CATCATCAGCGTACGGATCCCGCAAGGATCTCGACAACGTGCATCCACGA
ACCGAAACAAACAAGTTGTTCGGTGCAAGCACCACCATATCTTATAGATT
ACTCACTGTACTTATGCATATCAGACGACGCCGATTTTACAAGCAGGTGG
TCGCGAATCAAATATGTCGCCTAGAGGGTCCAACAAAGCCCGTACCGATG
ACACTCTTGAAGACTGACAACTATTCTGGCCTCGTCGTGGGAGTAAATGG
GTGCGTTCTTGTGAATGCAGCAAACTTCAAGCGACGGCAACGGTATGTGT
AATTTTATTCAGAAGAGCTCATAACACGACGAGATAAAATGCTAAAATTA
CCAGGAGATCTAATTTGGTAACTGTGGCTATAAATCTTAAACCCAGGTAC
CAAGTACATCTTTCAGGTGGTTTTTATTTAATGGCTGTCAGAAGTCCGTG
ATGAATACAATATTGGGCAACCGACCAGCCAATCGTATGGGTACGATATT
TCTAAGGAGATATTATGAAGTTGATTGGTCGACCCCCTCGCTGCTCCACC
CTCTCTAGAAGGAACAATCAAAGTAGCTCCCCCGCCTGTGACGCACTTCG
AGGGTTTGACCTTTACTAATACTGCCTCGCTTAACCAATTTCTCGCAGCA
CTGAAACATTTTTTTGGGAGCTTCGATCACCTCAAAAAAACTATCCTAGG
ACGGCGAAAACTCCCGATAAGGCAATCAGCAGCCCATTCGTTGACAATAT
CGGAGGGGCTAGGAGAGGCAATCAGAATGGAAAAAACGTATTCTATACAT
ACATAGGGAGTGTATTAGATCTCCAATCTTCGGAGGTTACGGCGCTGAGT
GTGAGGTCACCTCTGCTGGCAAGGGGGCTCGCCAACGGCAGAATAGTTCT
ATGGAGGTAGTCCTTCGGGATTTCGTAAGAAACGTTCGGTGTTTAGAGTC
GCGTGGGAATGTGAAGTAGGGCACGCGGCTACCAGTATAGAAAGAGACGT
GAATATTGTGATCGTTACAAGGAGGAGGTAGAATCGTAAGTAATTTGTGA
GACCTTTCAAGTGCATTTTTAGGGCCGAATAGAGACCGATTCACTGGCGT
CCACCCCCTCACCTGAGATCATACACCGGGGGCGTTACGCCGCTGATTAG
CGGCTGAAATCCACAATACCCATTTAACCCTAACCTCCATTCATTTACAC
GATGTCTTCCTCTAGGGTGCATCCTGAACAGGGCAGACTTAGGCGAACAA
TAATCTCCGTTGTTGAAGCTCATGGCACATTCTCAGTCCTAGATCTCCAC
TTACTTCGAGCGGAGGGAAGCAGGCGCGTCATGGCCTCAAGGAGCACTTC
TGTGCATTGCAATGACGCTGGAGATTGGTATGTTGTGTCTGGGGGGGCTG
ACAGAACAGTCATCCACTGGTCTCTTCTAGGGTTTGTTGGTGATACCCGG
GAAGTTAGCGAACAAGAGAATGCAACACTTCGCAAGACCGGAGTCTACGA
GGTGATAACTGAATCGGAGTTCGGTATGACAAATGACGAAGTTTATCTTT
GCGGAGAAGATCTTGTCACGAACATGATCCATGTTTAGCTATGCCGTGAC
TTTATCATGCATGGTCCCACGTGTGTGCTAGAGGTTAACCTGAGGAGGTT
GACCCGACCATAAACAATACGATAAATAACGCCTGATAACCTTGACTGCT
CATTATGAGCCGTAACTCATGTGGATCCATCAGCAAGCCCGTGCCAGAAT
CATATATTTTTATTGTAACTCGCTGTTCCAACGCTATATGGAAAAAGGTT
ACCCGTAAATCTGCCGCGGCGATTACTGCCTCCAATGACCGACAATATCA
TCGCGAGGATAGCGCTATCGACCGTAGCCTGTCCGTGACGCATGTGATGG
TGGTACAATTCCCAGCCTACGAAGCACCATCGCCAATCCACACAACCATT
ACAGCGGCGGCAGAAGCAGTGGCAGCAGCGGCATCGATAACACTGATGAG
ACAAAAACCCAACCAAGCTCAAAGTGAGGACACCACGGCGTTGCTTTGCG
AGTACGGCAACGCGGCGAGGCCGTCAAAGGAGGGTGGAAACTTGGGGAGT
AAGCATGTCTGCTTAGCAGTTTCAGGGGGGCTTATATCGATTATGGAGAT
CGTAGAGCCTCTGTGGCACGTCGGATGGACCGGCTCTCGATCGAAGGAAC
TCACGAAAGAGAGAGAAATCTTGTGCATGACACGAATGCCCCGTTGGTGG
GATGCCGGAGCACAGATCGGGATAGGAACGAGGGCTGGGGTAAATATTTT
CCGAACATCAGAGAATGAGGACATGCATGAGTGGGTAGGTCTTAAAACTA
GCTTAGATTATAGTTTAACAGACAAAGGCACCGAGAGTAAGCTAAACTTG
GGGCATGGGAGTATTCCAGGCTTCGTGGTAATGAGCGAGGGTGGATGGCT
TGGGTGGTATCAAGATGGCATCAGAAACGTTGAGGTGAGAACGGAAGTAA
CATCGGTTGAGGGTTTTACACGGAATCGAGCGAGAAGACGTCATCAATGA
GATATCGTGCCTCGTGTTTCAATAAAAATAAGAAATATTTTTAATAAGCT
GATGAGAATCGAAAGTTCAGTCTATAGCAATTTGCCAAACAAAGCGCCAC
CACTGTCTTGCTACGGCCACGGTCCTAACCTCTGCTCCCTGTGATTCATA
CAACGCAAGATATGTTGTTGCCTACCTAGATGGGGAAGTTGATCGTATTA
ACATTATGTCTAATTCCAACCGTGCCCAACATCTCCAGTTGACCTCCCAT
TTATGTCCCCGCGTATTTGCGCGTTTCGTTGTATTTTCAGCTTGTTTCCC
AGACAGAGCTCACTTCTCCAGATAAAAGCAACAACAGTCTCTCGGTGCGG
GCAAAACCGACGTGCATCGTGCCGATGCTAGCTTCCCCTAGGAAACCTCG
ACACGGTGAGCAGGTGTCGACGTTAAACGCAAGCATGCGCATGGATATCA
CCGGAAGACCACCATCTTCCAGCTCACAAACCAGAGCTTTGGTTTCAAGA
CAAGATATCGAAGTTGTACAAAATATCATTGTGGGCTATTCCGATGGATC
AATTGCTTTAGCGCCAATGTATCTCGTGGCGTCACCAAGTGACAGCTGCA
GACAATTGAACCTGCCACGAGCTGCGACAAAGATAATGACCCGGGTCGAT
ATGGACGGAGGAATGGCGGTTGAAGCGGGCATCACGGCTTTATGCTCGAT
CTCAGGACATCTGGTCGTCGTTGGTGACTCGGAAGGAAGAATGTCACTCT
GGGAGACGTCTGCCTCACCTGCCACTGGCAGGTGAAGCACCGAGGTGGGG
CAAAGAAAGGCCTTGATAACACTTCTCACCATCATTGCAACAACGTAGCG
AAATGACGGATGTATCCACACCCTCATCTGCCCGTATACGCATATTGCAG
GTCCTGCTTCTGGCTATAAGGTTGAATGCATTTCCCTCCCATAATTGTTT
GCGGTTCCTTTCTCGTATCGCCAAAATGCGCATTATCTTCAGTCCTCTCT
TGTGGGAAGACAAAGCAGCGCATAGCGGCCCGATCATTGCTATTCATCGC
GTTCAAGAATCGCCACGGGTGATTACGACTCCAACTAACCCAGCCAATCT
TGTCGACAACTTGCCACTACTTCCATCGCCTAAGCCGCACGAGTGGGTTG
TGTCAGCCGGAAGTGGCGGTGCGATCAGGGTTTGGAAATTACAATCACGG
CGACAACCCGAGGTCGCGAGATCCAACCGTCCCGTAGGATTAGAGTTCTT
TGCGACGGTTATGACTAACTTGTCAATAACTTCATTTTCGTGCTTTCTTG
TGAGTCCACCTGGTGGTGGCAGCGGTGGTCGTGGCCATGGAAGGATTGAT
GACAAAACTGAGCCATATTATCTCAGTAGCAAAGACACTGAAAATAATAC
CGCGCTTGGAAAACGACAAATGGAGAAGCAAGGAGGGCAACAACGATTGT
ACTGCGTCGTTGGCTCAGACAAAGGGTTCGTACAGGCATCGGGAATTGAT
TTCTCGGAAGGGCGGGCAGTCACCGGGCAGATGATGTGGTCCCAGAAGGT
GAGAGTGTGAGCATCGCCTCACATGCCTTTCGACTGAAATGACGAGAAAA
CGGACCTGAAGAAACTTATCGTGTTATGTACATGCATTTATGATATTTCC
CTGTATTATTCGGTGAACGTCTAGTCGATGCGTCCCATGCGCTAATTTTC
ACAGGTTGTTCTTGCTCTTACTCAGGTTTTCTCAAGTGGCAGGAGCTAAG
TATTGATTTCTTTGCATCTACAACATATCCCTATAATTCCCTATTTGGAG
CGTGCTCCCACATGACAGTGCAAAATGTATGGTTTGATCTGAGCGTTGAT
GTGTACTTGTCTCCGCTTGGCCCAAGTTACAGTCCCTTCCTTTCCCTCTC
TCTTCATCTATTTCCTATCTAATTCCTCTAAGATACACAATCGCCCGGTG
ACGGTCATGGATGCGTGTGGAATAGATGGCTGGGCAATCAGGTCTCCCGG
AGTTCCAACTTCACATTACGTCAATACCGCCAAGAAGAAACGGGATTCGC
CGTCTGTTGCGATGATGTTTGGACAGACTCGTGACGAAGGAAACCATGCA
CCAGGGTGCCTGATCTTGTCAGGATCTCTAGATCGTTCGTTGTGCGTCTT
TAGAGCGAGATACGATGAAGACTTTTACTTGTTGAGGAGACTAAACTTGG
GGTGCATTCCCAGAGGATTGCCCAGCGCACTTTTCGTAGAGCTCCAGGCT
GAAGCTGGGGCAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig6437:1310..7274+

>mRNA_H-elongata_contig6437.14024.1 ID=mRNA_H-elongata_contig6437.14024.1|Name=mRNA_H-elongata_contig6437.14024.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4248bp|location=Sequence derived from alignment at H-elongata_contig6437:1310..7274+ (Himanthalia elongata Himel1 dioecious)
ATGGCCTCAAGGAGCACTTCTGTGCATTGCAATGACGCTGGAGATTGGTA
TGTTGTGTCTGGGGGGGCTGACAGAACAGTCATCCACTGGTCTCTTCTAG
GGTTTGTTGGTGATACCCGGGAAGTTAGCGAACAAGAGAATGCAACACTT
CGCAAGACCGGAGTCTACGAGATGGCCTCAAGGAGCACTTCTGTGCATTG
CAATGACGCTGGAGATTGGTATGTTGTGTCTGGGGGGGCTGACAGAACAG
TCATCCACTGGTCTCTTCTAGGGTTTGTTGGTGATACCCGGGAAGTTAGC
GAACAAGAGAATGCAACACTTCGCAAGACCGGAGTCTACGAGGTTACCCG
TAAATCTGCCGCGGCGATTACTGCCTCCAATGACCGACAATATCATCGCG
AGGATAGCGCTATCGACCGTAGCCTGTCCGTGACGCATGTGATGGTGGTA
CAATTCCCAGCCTACGAAGCACCATCGCCAATCCACACAACCATTACAGC
GGCGGCAGAAGCAGTGGCAGCAGCGGCATCGATAACACTGATGAGACAAA
AACCCAACCAAGCTCAAAGTGAGGACACCACGGCGTTGCTTTGCGAGTAC
GGCAACGCGGCGAGGCCGTCAAAGGAGGGTGGAAACTTGGGGAGTAAGCA
TGTCTGCTTAGCAGTTTCAGGGGGGCTTATATCGATTATGGAGATCGTAG
AGCCTCTGTGGCACGTCGGATGGACCGGCTCTCGATCGAAGGAACTCACG
AAAGAGAGAGAAATCTTGTGCATGACACGAATGCCCCGTTACCCGTAAAT
CTGCCGCGGCGATTACTGCCTCCAATGACCGACAATATCATCGCGAGGAT
AGCGCTATCGACCGTAGCCTGTCCGTGACGCATGTGATGGTGGTACAATT
CCCAGCCTACGAAGCACCATCGCCAATCCACACAACCATTACAGCGGCGG
CAGAAGCAGTGGCAGCAGCGGCATCGATAACACTGATGAGACAAAAACCC
AACCAAGCTCAAAGTGAGGACACCACGGCGTTGCTTTGCGAGTACGGCAA
CGCGGCGAGGCCGTCAAAGGAGGGTGGAAACTTGGGGAGTAAGCATGTCT
GCTTAGCAGTTTCAGGGGGGCTTATATCGATTATGGAGATCGTAGAGCCT
CTGTGGCACGTCGGATGGACCGGCTCTCGATCGAAGGAACTCACGAAAGA
GAGAGAAATCTTGTGCATGACACGAATGCCCCATTATAGTTTAACAGACA
AAGGCACCGAGAGTAAGCTAAACTTGGGGCATGGGAGTATTCCAGGCTTC
GTGGTAATGAGCGAGGGTGGATGGCTTGGGTGGTATCAAGATGGCATCAG
AAACGTTGAGATTATAGTTTAACAGACAAAGGCACCGAGAGTAAGCTAAA
CTTGGGGCATGGGAGTATTCCAGGCTTCGTGGTAATGAGCGAGGGTGGAT
GGCTTGGGTGGTATCAAGATGGCATCAGAAACGTTGAGCTTGTTTCCCAG
ACAGAGCTCACTTCTCCAGATAAAAGCAACAACAGTCTCTCGGTGCGGGC
AAAACCGACGTGCATCGTGCCGATGCTAGCTTCCCCTAGGAAACCTCGAC
ACGGTGAGCAGGTGTCGACGTTAAACGCAAGCATGCGCATGGATATCACC
GGAAGACCACCATCTTCCAGCTCACAAACCAGAGCTTTGGTTTCAAGACA
AGATATCGAAGTTGTACAAAATATCATTGTGGGCTATTCCGATGGATCAA
TTGCTTTAGCGCCAATGTATCTCGTGGCGTCACCAAGTGACAGCTGCAGA
CAATTGAACCTGCCACGAGCTGCGACAAAGATAATGACCCGGGTCGATAT
GGACGGAGGAATGGCGGTTGAAGCGGGCATCACGGCTTTATGCTCGATCT
CAGGACATCTGGTCGTCGTTGGTGACTCGGAAGGAAGAATGTCACTCTGG
GAGACGTCTGCCTCACCTGCCACTGGCAGCTTGTTTCCCAGACAGAGCTC
ACTTCTCCAGATAAAAGCAACAACAGTCTCTCGGTGCGGGCAAAACCGAC
GTGCATCGTGCCGATGCTAGCTTCCCCTAGGAAACCTCGACACGGTGAGC
AGGTGTCGACGTTAAACGCAAGCATGCGCATGGATATCACCGGAAGACCA
CCATCTTCCAGCTCACAAACCAGAGCTTTGGTTTCAAGACAAGATATCGA
AGTTGTACAAAATATCATTGTGGGCTATTCCGATGGATCAATTGCTTTAG
CGCCAATGTATCTCGTGGCGTCACCAAGTGACAGCTGCAGACAATTGAAC
CTGCCACGAGCTGCGACAAAGATAATGACCCGGGTCGATATGGACGGAGG
AATGGCGGTTGAAGCGGGCATCACGGCTTTATGCTCGATCTCAGGACATC
TGGTCGTCGTTGGTGACTCGGAAGGAAGAATGTCACTCTGGGAGACGTCT
GCCTCACCTGCCACTGGCAGTCCTCTCTTGTGGGAAGACAAAGCAGCGCA
TAGCGGCCCGATCATTGCTATTCATCGCGTTCAAGAATCGCCACGGGTGA
TTACGACTCCAACTAACCCAGCCAATCTTGTCGACAACTTGCCACTACTT
CCATCGCCTAAGCCGCACGAGTGGGTTGTGTCAGCCGGAAGTGGCGGTGC
GATCAGGGTTTGGAAATTACAATCACGGCGACAACCCGAGGTCGCGAGAT
CCAACCGTCCCGTAGGATTAGAGTTCTTTGCGACGGTTATGACTAACTTG
TCAATAACTTCATTTTCGTGCTTTCTTGTGAGTCCACCTGGTGGTGGCAG
CGGTGGTCGTGGCCATGGAAGGATTGATGACAAAACTGAGCCATATTATC
TCAGTAGCAAAGACACTGAAAATAATACCGCGCTTGGAAAACGACAAATG
GAGAAGCAAGGAGGGCAACAACGATTGTACTGCGTCGTTGGCTCAGACAA
AGGGTTCGTACAGGCATCGGGAATTGATTTCTCGGAAGGGCGGGCAGTCA
CCGGGCAGATGATGTGGTCCCAGAAGTCCTCTCTTGTGGGAAGACAAAGC
AGCGCATAGCGGCCCGATCATTGCTATTCATCGCGTTCAAGAATCGCCAC
GGGTGATTACGACTCCAACTAACCCAGCCAATCTTGTCGACAACTTGCCA
CTACTTCCATCGCCTAAGCCGCACGAGTGGGTTGTGTCAGCCGGAAGTGG
CGGTGCGATCAGGGTTTGGAAATTACAATCACGGCGACAACCCGAGGTCG
CGAGATCCAACCGTCCCGTAGGATTAGAGTTCTTTGCGACGGTTATGACT
AACTTGTCAATAACTTCATTTTCGTGCTTTCTTGTGAGTCCACCTGGTGG
TGGCAGCGGTGGTCGTGGCCATGGAAGGATTGATGACAAAACTGAGCCAT
ATTATCTCAGTAGCAAAGACACTGAAAATAATACCGCGCTTGGAAAACGA
CAAATGGAGAAGCAAGGAGGGCAACAACGATTGTACTGCGTCGTTGGCTC
AGACAAAGGGTTCGTACAGGCATCGGGAATTGATTTCTCGGAAGGGCGGG
CAGTCACCGGGCAGATGATGTGGTCCCAGAAGATACACAATCGCCCGGTG
ACGGTCATGGATGCGTGTGGAATAGATGGCTGGGCAATCAGGTCTCCCGG
AGTTCCAACTTCACATTACGTCAATACCGCCAAGAAGAAACGGGATTCGC
CGTCTGTTGCGATGATGTTTGGACAGACTCGTGACGAAGGAAACCATGCA
CCAGGGTGCCTGATCTTGTCAGGATCTCTAGATCGTTCGTTGTGCGTCTT
TAGAGCGAGATACGATGAAGACTTTTACTTGTTGAGGAGACTAAACTTGG
GGTGCATTCCCAGAGGATTGCCCAGCGCACTTTTCGTAGAGCTCCAGGCT
GAAGCTGGGGCAGACATACACAATCGCCCGGTGACGGTCATGGATGCGTG
TGGAATAGATGGCTGGGCAATCAGGTCTCCCGGAGTTCCAACTTCACATT
ACGTCAATACCGCCAAGAAGAAACGGGATTCGCCGTCTGTTGCGATGATG
TTTGGACAGACTCGTGACGAAGGAAACCATGCACCAGGGTGCCTGATCTT
GTCAGGATCTCTAGATCGTTCGTTGTGCGTCTTTAGAGCGAGATACGATG
AAGACTTTTACTTGTTGAGGAGACTAAACTTGGGGTGCATTCCCAGAGGA
TTGCCCAGCGCACTTTTCGTAGAGCTCCAGGCTGAAGCTGGGGCAGAC
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