mRNA_H-elongata_contig64297.14019.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.830e-80 Identity = 137/191 (71.73%), Postives = 149/191 (78.01%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVV-DGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDF 570
QVCPDG PK+LDIVDCTGSGDVDTS V+KG V DGVR+IKGLSGR LRLNP W N SGEWR+GIKRAY +FPK LVTRVKAERRKDWD KHLAAE AVAREISAWK HP P T KKFL DLEARAA LE+SK +DDPGP+HDCVVWKGG AAVDT EDG+L++A+AMTDF
Sbjct: 61 QVCPDGSPKVLDIVDCTGSGDVDTSTVLKGGSVTTAADGVREIKGLSGRTLRLNPKWTNPSGEWRVGIKRAYGLFPKLLVTRVKAERRKDWDKKHLAAEAAVAREISAWKATHPNPNPTDKKFLLDLEARAAHLEESKASLDDPGPLHDCVVWKGGXXXXXXXXXX--XXXAAVDTKEDGDLTQAVAMTDF 249
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A836CLL6_9STRA (Subtilase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL6_9STRA) HSP 1 Score: 174 bits (441), Expect = 7.040e-47 Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTST--QKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWK 459
Q DGRPK++D++DC GSGDVDT+ V G DGVR+IKGLSGR LRLN W+N G WR+G+KRA+E++P+ L VK ERRK +D AAE A+ RE++ WK AH P ++ K+ LQDLE R A L+ + D DDPGPI DCVVWK
Sbjct: 51 QTTSDGRPKVIDVIDCGGSGDVDTTTTVTG---AETDGVREIKGLSGRALRLNAAWENPGGAWRVGLKRAFELYPRGLTAYVKGERRKRFDAAQRAAEAALRRELAEWKAAHAAPAASAADKEALQDLEDRLAHLQQAAKDYDDPGPILDCVVWK 202
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A1Y1IEG1_KLENI (Tripeptidyl-peptidase II n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEG1_KLENI) HSP 1 Score: 161 bits (408), Expect = 1.900e-42 Identity = 89/197 (45.18%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 4 VCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLP-TSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAE-------DGNLSEAIAMTDF 570
V +G+PK++D+VDCTGSGDVDTS+VVK D DG+ I+G SGR LR+NP WKN SGEW +G+K +E+F K L RVK ERRK WD KH + R +SA+ +P P T KK +DL+AR L+ D DD GPI DCVVW+ ++++ W AA+DT + G L++ + +T+F
Sbjct: 58 VTSEGKPKVIDVVDCTGSGDVDTSKVVKAD----ADGM--IEGGSGRQLRVNPEWKNPSGEWHVGVKHLFELFTKGLTERVKKERRKSWDAKHRQSATEELRRLSAFDAKNPKPATDKLKKEREDLQARVDLLKKLAEDYDDRGPIVDCVVWR----------DDKDTWRAAIDTTDLEEEGSSVGKLADFVPLTNF 238
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A4A0H0_9BACT (Tripeptidyl-peptidase II n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A4A0H0_9BACT) HSP 1 Score: 156 bits (394), Expect = 1.430e-40 Identity = 81/190 (42.63%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDF 570
Q PDGRPKI+D+VD +GSGD+DTS V K D V++G L+GR L + WK SGE+ +G+KR Y++FP LV+R+K ER+KDWD + A + ++ +I A+ +AHP P+ +K+ L++L R L+ + + DDPGPI+DCVV+ G + W AA+D EDG L + +T+F
Sbjct: 71 QTTPDGRPKIIDMVDASGSGDIDTSTVRKMDDEHVIEG------LTGRKLTIPKKWKCPSGEFHVGMKRGYDLFPGGLVSRLKKERKKDWDEEFRAVQAKLSDQIEAFHIAHPKPSEVEKEELKELTTRRTELDKAHDNWDDPGPIYDCVVFYDG-----------KAWRAAIDADEDGQLDDEKLLTNF 243
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A1Y2GAH1_9FUNG (Tripeptidyl-peptidase II n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAH1_9FUNG) HSP 1 Score: 155 bits (393), Expect = 1.960e-40 Identity = 84/190 (44.21%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDF 570
QV DG+PKI+DIVDC+GSGDV T+ +VK DGV I GL+GR LRL+ WKN +GE+RIGIKRA+ +FP L R+K ER ++ KH + E++A+ +HP T +++ D AR L+DS + DPGP++DCVV+ G E W A +DT EDG+L +A +TD+
Sbjct: 58 QVTSDGKPKIIDIVDCSGSGDVPTTTIVKPT---EEDGVPVITGLTGRKLRLSKDWKNPTGEYRIGIKRAFNLFPVELTDRIKKERLAEFQKKHFLLVAKIQDELAAFLESHPTLTEEEQRTKADFNARLEALKDSLKNYSDPGPVYDCVVFHDG-----------EVWRAVIDTNEDGDLRDAPVLTDY 233
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A197JRB6_9FUNG (Tripeptidyl-peptidase II n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JRB6_9FUNG) HSP 1 Score: 155 bits (391), Expect = 3.630e-40 Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDF 570
QV DG+PKI+DIVDC+GSGD+ T+ +VK + DG+ I GL+GR L LN WKN SGE+RIGIKRAY++FP L R+K ER ++ KH V E++A+ AH T ++ DL AR L+DS + DPGP++DCVV+ G W A VD EDG+L +A +T++
Sbjct: 58 QVTSDGKPKIVDIVDCSGSGDIPTTTIVKP--TENDDGIPVITGLTGRKLHLNKNWKNPSGEYRIGIKRAYDLFPSDLADRIKEERLAEFQKKHFLLVAKVQEELAAFIKAHTTLTEEDQRTKADLNARLDVLKDSLKNFSDPGPVYDCVVFHDGN-----------VWRAVVDAKEDGDLKDAPLLTNY 234
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A7R9V402_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V402_9CHLO) HSP 1 Score: 147 bits (371), Expect = 4.830e-40 Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGG 465
QV +G+PKILD++DCTGSGDVDTS VVK DG DG I SGR L+LNP WKN +G+W +G K Y++F ++LVTR++ ERR+ WD +H AA A A +++A KK +LEAR A+L+ + + +D GP+ DCVVW G
Sbjct: 160 QVTSEGKPKILDVIDCTGSGDVDTSTVVKADG----DGC--IVSPSGRSLKLNPAWKNPTGDWHVGCKHVYQLFSRTLVTRMREERRRQWDERHRAAGAAAAADVAALD---GRAREADKKLRAELEARVAYLKAASKEYEDHGPLIDCVVWHNG 305
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A2D5WGI2_9BACT (Tripeptidyl-peptidase II n=7 Tax=Verrucomicrobia TaxID=74201 RepID=A0A2D5WGI2_9BACT) HSP 1 Score: 153 bits (387), Expect = 1.250e-39 Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKFLQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDF 570
QV DGRPK++D+VD +GSGDVDTS V + DG + GL+GR LRL WKN SG+WR+GIK AYE+FP SLV+R+K ER+K+WD + A+ +++ + HP P KK +L+A+ L + +DPGPI+DC+V+ G + W AAVDT EDG+ + MT+F
Sbjct: 85 QVTSDGRPKVVDVVDGSGSGDVDTSAVHEAK-----DGT--LTGLTGRTLRLGDDWKNPSGKWRLGIKAAYELFPASLVSRLKTERKKEWDKQQRDRAAALQAKLAEFDEKHPSPKGDTKKERAELQAQIDLLASLNSSYNDPGPIYDCIVFNDG-----------KAWRAAVDTDEDGDFGDEKLMTNF 256
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: W7U693_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U693_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.600e-39 Identity = 84/198 (42.42%), Postives = 114/198 (57.58%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKG-----DGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKF--LQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDFH 573
QV DG+PKI+D++DC+GSGDVDTS V+ +G IKGL+GR L LN W N SG+W IG+KRA E++P L +RV E +K+W +KH E + RE++A+K + T+ + + D EARA+ LE+ +D GP++D VVW G W AAVD EDG+L MTDFH
Sbjct: 58 QVTSDGKPKIIDMIDCSGSGDVDTSTTVEALPPAENGSPDSGAKLNIKGLTGRTLHLNMAWPNPSGKWHIGVKRAVELYPNGLKSRVAKEMKKEWTLKHREVEAGLQREVAAFKASTGTGAMTRDEIEDMADREARASQLEEIAKGYEDAGPLYDVVVWFDGSA-----------WQAAVDVREDGDLRSWEPMTDFH 244
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Match: A0A4D9D6J9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6J9_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.190e-39 Identity = 85/198 (42.93%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 1 QVCPDGRPKILDIVDCTGSGDVDTSQVVKG-----DGVQVVDGVRQIKGLSGRILRLNPGWKNASGEWRIGIKRAYEVFPKSLVTRVKAERRKDWDMKHLAAEVAVAREISAWKVAHPLPTSTQKKF--LQDLEARAAFLEDSKTDIDDPGPIHDCVVWKGGGGLEAELGEEEERWWAAVDTAEDGNLSEAIAMTDFH 573
QV DG+PKI+D++DC+GSGDVDTS V+ G IKGL+GR L LN W N SG+W IG+KRA E++P L +RV E +K+W +KH E + RE++A+K + T+ + + D EARA+ LE+ DD GP++D VVW G W AAVD EDG+L MTDFH
Sbjct: 58 QVTSDGKPKIIDMIDCSGSGDVDTSTTVEALPPAESGSPDSIAKLNIKGLTGRTLHLNTAWPNPSGKWHIGVKRAVELYPNGLKSRVAKEMKKEWTLKHREVEAGLQREVTAFKASTGTGAMTRDEMEDMADREARASQLEEIAKGYDDAGPLYDVVVWFDGSA-----------WQAAVDVREDGDLRSWEPMTDFH 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64297.14019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64297.14019.1 >prot_H-elongata_contig64297.14019.1 ID=prot_H-elongata_contig64297.14019.1|Name=mRNA_H-elongata_contig64297.14019.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp QVCPDGRPKILDIVDCTGSGDVDTSQVVKGDGVQVVDGVRQIKGLSGRILback to top mRNA from alignment at H-elongata_contig64297:87..2686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64297.14019.1 ID=mRNA_H-elongata_contig64297.14019.1|Name=mRNA_H-elongata_contig64297.14019.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2600bp|location=Sequence derived from alignment at H-elongata_contig64297:87..2686+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64297:87..2686+ >mRNA_H-elongata_contig64297.14019.1 ID=mRNA_H-elongata_contig64297.14019.1|Name=mRNA_H-elongata_contig64297.14019.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1158bp|location=Sequence derived from alignment at H-elongata_contig64297:87..2686+ (Himanthalia elongata Himel1 dioecious)back to top |