mRNA_H-elongata_contig64111.14000.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A6H5JGN0_9PHAE (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGN0_9PHAE) HSP 1 Score: 270 bits (691), Expect = 2.440e-86 Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
GS+NQIPP+A+VSGDCRVTPFY V VQ+S+E YV EINADPSILP+RG FSKYVLP E R GTIEL W+T+GEDGIACNL SEGA ALNA+T V+G+S+PYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSL AMGNA+KIL+G +ARLE
Sbjct: 345 GSINQIPPHATVSGDCRVTPFYGVDKVQESIEKYVAEINADPSILPSRGAFSKYVLPAEGRQGTIELTWVTKGEDGIACNLESEGADALNAATATVIGQSAPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLAAMGNAVKILAGTVARLE 504
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A835ZIU8_9STRA (Acetylornithine deacetylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU8_9STRA) HSP 1 Score: 218 bits (554), Expect = 1.820e-66 Identity = 107/160 (66.88%), Postives = 127/160 (79.38%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
GSVNQIPP+A++ GDCRVTPFY VA V+ ++E YV ++N + + LPTRGP SKY LPD R G IEL W+ +GEDGIAC+L SEG AAL +T +V G + PYSISGSLPLVRW+QD G+DVQICGYGLSSRYHAENE CSL M A +IL+ VIARLE
Sbjct: 288 GSVNQIPPHATIMGDCRVTPFYKVADVRAAIEAYVADLNNNLAQLPTRGPCSKYELPD--RKGRIELTWIFDGEDGIACSLDSEGNAALVGATRDVTGDAQPYSISGSLPLVRWMQDNGFDVQICGYGLSSRYHAENECCSLSKMKEATRILAAVIARLE 445
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A7S3XZI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZI8_HETAK) HSP 1 Score: 187 bits (476), Expect = 8.210e-55 Identity = 90/160 (56.25%), Postives = 119/160 (74.38%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
GS+NQIPP+A+ SGD R+TPFY +A +VE YV E+NAD L G +SK+VLP+E+ G + L+WLTEGE+GIAC + SEG L A+T++V G+ P++I+G+LPLVRWLQD G+DVQI GYG SS YHA+NEY + M +AIKILS + +LE
Sbjct: 287 GSLNQIPPHATASGDIRLTPFYDIADCMAAVERYVAELNADIGQLQGPGNYSKFVLPEEDLQGKLVLSWLTEGENGIACRIESEGHGVLAAATKDVKGECKPFAINGTLPLVRWLQDNGFDVQIAGYGSSSAYHADNEYLDFDDMKDAIKILSRTVFKLE 446
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A7S3HS36_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS36_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.980e-54 Identity = 93/168 (55.36%), Postives = 116/168 (69.05%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSIL--------PTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
GS+NQ+PP +V GD R+TPFY + V + YV EINA+P++L P GP SKY LPDE G +EL W+ EGE+G+AC L S G A+ +TE VLG PYSI GSLPL+R LQDQG+DVQI GYG+SSRYHA+NE SL ++ +AIKI S VIA +E
Sbjct: 274 GSLNQLPPECTVQGDIRITPFYNIHDVTAKINTYVAEINANPNVLIEIGSGDMPVHGPHSKYTLPDEGLDGRVELTWIGEGENGVACKLDSVGYNAILEATEKVLGSVKPYSIGGSLPLIRDLQDQGFDVQIAGYGISSRYHADNECSSLASLKSAIKIFSSVIAIME 441
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A7S2XXJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ8_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.400e-49 Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAI 447
GS+NQIPP A+VSGD R+ PFY++ V VE YV+++N + LP RGP SKY + DE G +EL WL+EGEDGIAC L SEG + +T+ VLG +P+++SGSLPLVR LQD G+D+Q+ GYGLS+RYHA+NE + M AI
Sbjct: 158 GSLNQIPPNATVSGDIRLIPFYSMKEVMARVESYVEDLNNSVTDLPQRGPASKYEVKDEGMKGKLELTWLSEGEDGIACRLDSEGNKVIQEATKEVLGDVTPFALSGSLPLVRNLQDSGFDIQMVGYGLSTRYHADNECVDINDMKKAI 306
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: L1JV51_GUITC (M20_dimer domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JV51_GUITC) HSP 1 Score: 171 bits (434), Expect = 1.050e-48 Identity = 83/160 (51.88%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
G VNQIP ++ GD R+TPFYT +KS++ YV+E+N D S LPTRGP SKY LPD+ GT+EL + E GIACNL S G L +T+ VLG+ PYS++GSLPLV+ LQD+G+D+QI GYGL YHA+NEY L G +I+ +I +L
Sbjct: 273 GGVNQIPAECTICGDMRLTPFYTAQQAKKSLQSYVEELNKDISKLPTRGPSSKYTLPDQGLTGTLELTIMGEAMSGIACNLESPGNKVLFDATQEVLGECKPYSLTGSLPLVKELQDEGFDIQIIGYGLMKTYHAKNEYGLLSDFGQGFQIMCKIIQKLS 432
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A0A9V4S6_ARUDO (Pco121857a n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9V4S6_ARUDO) HSP 1 Score: 163 bits (412), Expect = 2.300e-48 Identity = 79/161 (49.07%), Postives = 110/161 (68.32%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINAD-PSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
G +NQIP ++SGD R+TPFY+ + V K ++ Y+++IN +IL TRGP SKYVLPDEN G +E+ + + +G+ACNL S G AL +TE ++G PYSI+GSLPL+R LQD+G+DVQ GYGL YHA+NEYC M ++ +I++LE
Sbjct: 11 GGLNQIPGECTISGDIRLTPFYSTSYVVKRLQEYIEDINERLETILDTRGPVSKYVLPDENLRGRLEITFGGDVMNGVACNLESRGFQALCKATEEIVGHVEPYSITGSLPLIRELQDEGFDVQTAGYGLLKTYHAKNEYCLFSDMAQGFQVFVSIISQLE 171
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A482SPY1_9ARCH (M20/M25/M40 family metallo-hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPY1_9ARCH) HSP 1 Score: 171 bits (432), Expect = 2.400e-48 Identity = 86/158 (54.43%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPT---RGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGV 465
GS+NQ+P V GD R +PFY + + ++E YV EIN +PS++ RGP SKY LP+E+R G + L WLT ++G+AC L S+G AL A+T +VLG + PYSI GSLPL+R LQDQG+DVQI GYG+S+RYHA+NE SL + NA KILS V
Sbjct: 284 GSLNQLPGGVMVEGDIRSSPFYDIKNLMTAIERYVAEINENPSMVENPEVRGPHSKYNLPEESRPGKLTLKWLTHADNGVACRLDSKGFKALVAATNDVLGFAKPYSIGGSLPLIRELQDQGFDVQISGYGISARYHADNECASLSSFKNATKILSKV 441
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A5P1F6A3_ASPOF (M20_dimer domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F6A3_ASPOF) HSP 1 Score: 164 bits (415), Expect = 2.970e-48 Identity = 82/160 (51.25%), Postives = 107/160 (66.88%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
G VNQIP +VSGD R+TPFY+ V K ++ YV +INA+ LPT+GP SKYVLPDEN G + +++ G+ACNL S G L +TE V+G PYSI+GSLPL+R LQD+G+DVQ GYGL + YHA+NEYC M ++ +IA+LE
Sbjct: 54 GGVNQIPAECTVSGDVRLTPFYSTKDVVKKLQEYVDDINANIDKLPTQGPVSKYVLPDENLTGRLSISFDESIMTGVACNLDSRGFHVLCKATELVVGHVKPYSITGSLPLIRELQDEGFDVQTSGYGLMATYHAKNEYCLFSDMCQGFQVFVSIIAQLE 213
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Match: A0A833QFD2_9POAL (Acetylornithine deacetylase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QFD2_9POAL) HSP 1 Score: 169 bits (428), Expect = 9.360e-48 Identity = 82/160 (51.25%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 1 GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPFSKYVLPDENRLGTIELNWLTEGEDGIACNLVSEGAAALNASTENVLGKSSPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLEAMGNAIKILSGVIARLE 480
G +NQIP +VSGD R+TPFY+ V ++ YV++INA+ L TRGP SKYVLPDEN G +E+ + G+ACNL S G AL +TE V+G PYSI+GSLPL+R LQD+G+DVQ CGYG+ + YHA+NEYC M K+ +I++LE
Sbjct: 281 GGINQIPGECTVSGDIRLTPFYSTTDVVNKLKEYVEDINANIEKLHTRGPVSKYVLPDENLRGRVEITIDGDIMSGVACNLESRGFKALCKATEEVVGSVQPYSITGSLPLIRDLQDEGFDVQTCGYGIMNTYHAKNEYCLFSDMAQGFKVFVSIISQLE 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64111.14000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64111.14000.1 >prot_H-elongata_contig64111.14000.1 ID=prot_H-elongata_contig64111.14000.1|Name=mRNA_H-elongata_contig64111.14000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp GSVNQIPPYASVSGDCRVTPFYTVAAVQKSVEGYVKEINADPSILPTRGPback to top mRNA from alignment at H-elongata_contig64111:348..1417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64111.14000.1 ID=mRNA_H-elongata_contig64111.14000.1|Name=mRNA_H-elongata_contig64111.14000.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1070bp|location=Sequence derived from alignment at H-elongata_contig64111:348..1417+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64111:348..1417+ >mRNA_H-elongata_contig64111.14000.1 ID=mRNA_H-elongata_contig64111.14000.1|Name=mRNA_H-elongata_contig64111.14000.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig64111:348..1417+ (Himanthalia elongata Himel1 dioecious)back to top |