mRNA_H-elongata_contig6402.13990.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6402.13990.1
Unique NamemRNA_H-elongata_contig6402.13990.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6402.13990.1 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.760e-15
Identity = 88/223 (39.46%), Postives = 100/223 (44.84%), Query Frame = 2 
Query:    2 AEEQCTIEARIHAEQEELMRQIEERKLRDNDSTGATAAADASGGGAVGAEASKTGSGPRPSASSGRLSFATVAERRLTEQQIRNQHIPLP-------------------------------APGT-------PISTRRRHQYRRGSRFSARRLPVGERDSDSGSDYQDRHQQHPPDGMGVLGSGMVDPHVEGEIQQVEDLMLMEALRLSVLEEQARRERSGDM 556
            AEEQ TIEARIHAEQEELMRQ+ ER  R+  +                                   SFATVAERR+TE QIR QH+P                                 APG+         +  R H  RRGSR      P   R    G+   D   +   DG+G           EGEIQQVEDLML+EALRLSVLEEQARRERSGD+
Sbjct:  195 AEEQRTIEARIHAEQEELMRQVTERNARETSAXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXSPSFATVAERRMTEDQIRKQHVPPATXXXXXXXXXSIGRQSSMGAAAGARTAGGRVAPGSLKHALAVSAAAGRHHHNRRGSRIG----PGRRRSYLEGAGGNDGGNEFHADGVG-----------EGEIQQVEDLMLVEALRLSVLEEQARRERSGDL 398
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BLAST of mRNA_H-elongata_contig6402.13990.1 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 4.430e-6
Identity = 45/86 (52.33%), Postives = 50/86 (58.14%), Query Frame = 2 
Query:  299 RRHQYRRGSRFSARRLPVGERDSDSGSDYQDRHQQHPPDGMGVLGSGMVDPHVEGEIQQVEDLMLMEALRLSVLEEQARRERSGDM 556
            R H  RRGSR      P   R    G+   D   +   DG+G           EGEIQQVEDLML+EALRLSVLEEQARRERSGD+
Sbjct:  360 RHHHNRRGSRIG----PGRRRSYLEGAGGNDGADEFHADGVG-----------EGEIQQVEDLMLVEALRLSVLEEQARRERSGDL 430
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6402.13990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L120_9PHAE1.760e-1539.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LDS6_ECTSI4.430e-652.33RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6402contigH-elongata_contig6402:1348..10299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.9
Seed ortholog evalue1.1e-07
Seed eggNOG ortholog2880.D8LDS6
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.cellular response to glucose starvation
EggNOG OGsKOG2789@1,KOG2789@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size3988
Cds size2499
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6402.13990.1prot_H-elongata_contig6402.13990.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6402 2782..10244 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931026.1353552-UTR-H-elongata_contig6402:1347..27811622931026.1353552-UTR-H-elongata_contig6402:1347..2781Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6402 1348..2781 -
1691679667.0505514-UTR-H-elongata_contig6402:1347..27811691679667.0505514-UTR-H-elongata_contig6402:1347..2781Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6402 1348..2781 -
1622931026.3404646-UTR-H-elongata_contig6402:10244..102991622931026.3404646-UTR-H-elongata_contig6402:10244..10299Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6402 10245..10299 -
1691679667.1492996-UTR-H-elongata_contig6402:10244..102991691679667.1492996-UTR-H-elongata_contig6402:10244..10299Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6402 10245..10299 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931026.1530573-CDS-H-elongata_contig6402:2781..28051622931026.1530573-CDS-H-elongata_contig6402:2781..2805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 2782..2805 -
1691679667.063404-CDS-H-elongata_contig6402:2781..28051691679667.063404-CDS-H-elongata_contig6402:2781..2805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 2782..2805 -
1622931026.2034748-CDS-H-elongata_contig6402:3620..44001622931026.2034748-CDS-H-elongata_contig6402:3620..4400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 3621..4400 -
1691679667.0714788-CDS-H-elongata_contig6402:3620..44001691679667.0714788-CDS-H-elongata_contig6402:3620..4400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 3621..4400 -
1622931026.231299-CDS-H-elongata_contig6402:4987..61151622931026.231299-CDS-H-elongata_contig6402:4987..6115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 4988..6115 -
1691679667.0789406-CDS-H-elongata_contig6402:4987..61151691679667.0789406-CDS-H-elongata_contig6402:4987..6115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 4988..6115 -
1622931026.2504156-CDS-H-elongata_contig6402:6618..66971622931026.2504156-CDS-H-elongata_contig6402:6618..6697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 6619..6697 -
1691679667.0891452-CDS-H-elongata_contig6402:6618..66971691679667.0891452-CDS-H-elongata_contig6402:6618..6697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 6619..6697 -
1622931026.2706897-CDS-H-elongata_contig6402:7232..73871622931026.2706897-CDS-H-elongata_contig6402:7232..7387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 7233..7387 -
1691679667.1013381-CDS-H-elongata_contig6402:7232..73871691679667.1013381-CDS-H-elongata_contig6402:7232..7387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 7233..7387 -
1622931026.2900534-CDS-H-elongata_contig6402:7777..78681622931026.2900534-CDS-H-elongata_contig6402:7777..7868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 7778..7868 -
1691679667.113104-CDS-H-elongata_contig6402:7777..78681691679667.113104-CDS-H-elongata_contig6402:7777..7868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 7778..7868 -
1622931026.310728-CDS-H-elongata_contig6402:8400..85081622931026.310728-CDS-H-elongata_contig6402:8400..8508Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 8401..8508 -
1691679667.127886-CDS-H-elongata_contig6402:8400..85081691679667.127886-CDS-H-elongata_contig6402:8400..8508Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 8401..8508 -
1622931026.3272414-CDS-H-elongata_contig6402:10110..102441622931026.3272414-CDS-H-elongata_contig6402:10110..10244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 10111..10244 -
1691679667.1386757-CDS-H-elongata_contig6402:10110..102441691679667.1386757-CDS-H-elongata_contig6402:10110..10244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6402 10111..10244 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6402.13990.1

>prot_H-elongata_contig6402.13990.1 ID=prot_H-elongata_contig6402.13990.1|Name=mRNA_H-elongata_contig6402.13990.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=833bp
MRQIEERKLRDNDSTGATAAADASGGGAVGAEASKTGSGPRPSASSGRLS
FATVAERRLTEQQIRNQHIPLPAPGTPISTRRRHQYRRGSRFSARRLPVG
ERDSDSGSDYQDRHQQHPPDGMGVLGSGMVDPHVEGEIQQVEDLMLMEAL
RLSVLEEQARRERSGDMRRAAAAAAAATAGGGPGGSSGAASSASLGARLS
GSYWNSLLPPVRAASTSATAGDSLSSASASASEPMSFLSGGGLPRWRDVE
GIQRDLMATGDGSGLSTRRGEEATVTALTVETSGTAAAPEAGAVEALRRV
LPAREQEGRSGEGSGTAASASGNPAPVSVAPNHSDATPPLAASMGERSLS
FRQQQQPESAFTIEQSPHTTRAPIAVGEAEAGGGRGGNGNGRSARYGGMN
AAAGGDSCARGRDYGSEVGGRTARAAAAEAITIARENAMEGYLSELPESE
EEQLEIAIALSLRSSGNGNSDGNMRARITGAGDLERMLEDPGGGSSTSGI
FGSETSTVTPFASSGGGGAAGDASPTEGDLVRAARLAGLGSLDEDFTTDP
LAAEEMWSITADGEGKKEEVSSFDSSLFSVSSEAPASSAAAAVGGCDARS
FSRPPPQGAREEEEVVRKLPASTLEGEGSSSGTTDAFEAAVADFSAFASA
ATGAGPFAPGPILSEEEEKKEENTSRLQRATRRGGDGASAEERLESRSVA
ASSVHGASGPSKAGERQLEGLVSERVGSTPIFTASSIAAFSSAASCIAEI
GGGHGVDGDFAVAERDDGGGVQVPATGSGVPSTEILGAAVTAEETSPETA
AAEVGSGVESIGVQMGVGGSNEAGKEASGAPA*
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mRNA from alignment at H-elongata_contig6402:1348..10299-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6402.13990.1 ID=mRNA_H-elongata_contig6402.13990.1|Name=mRNA_H-elongata_contig6402.13990.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8952bp|location=Sequence derived from alignment at H-elongata_contig6402:1348..10299- (Himanthalia elongata Himel1 dioecious)
GGCGGAGGAGCAGTGCACGATCGAAGCGCGTATCCACGCCGAGCAGGAGG
AGCTCATGCGCCAGATCGAGGAAAGGAAGCTGAGGGATAACGACAGCACC
GGTGCCACCGCTGCTGCTGATGCCTCCGGCGGAGGGGCTGTAGGAGCGGA
AGCCTCCAAGACGGGATCGGGACCTCGTCCGTCGGCATCGTGAGTGCTAC
CGTACACGATAGTGTATCGTGATGTGTGGTATACTGTTAACACAATATTT
TATTTCTACATAATAGTGTAATGTGTTGTGTCGCATACTGTAGCACAGTA
GTTTCTTGTTGTTGTCGCCGCTTGATATTTTGAGTATCGTCATCAGTGTC
ACACGGAAGACTCCTCAAAAGGACTCTTAGATTAAGACATTAAGGTGATG
AGCCAAGATACGAAGGTTAAGGGTTGGTGCTACGATGTCATTGTCTGCTG
CCCATCATGTCATTGTCGCTGCCTATCTTATCCTTGGGTTTTGTGAAGTA
TAGTGTGGTGTAGTTTAGTATATTAAGAGTATATGGCAGTAGTAGTTTGG
TGGTAGGCTATTATAGTGTTATATGGTGATATCGTTAAGAGTAGCGCGGT
ATGAACGCAATGGTTTCGGTTTGATCGTTGAAAATGACGGAAGCTCGGCG
GGACGAACCAATCGTAACCAAGGAAGGCCCACTGTACCAATAGTGGGTGT
GGGAAAAGACAGGGCACAATAATTGTCCCATGAGGTTATCTGAATAGACT
TCAGCCGTTACTCAAGTTACCTTGAGGACTGTTGGCTCAGTGTCAGTGAA
CTCTCGGTGGTAAACGCCATCGGTACGCATTTGCGTCACCTGACCAAATC
GGGATTGGCCCGATGGCCGTTGACGGTAAAGATGGACGCCGTCGCGGAAG
ATGAGAGGATCCCGAGAGCACGGACCATATTCAGCCTGGGTTGGGAAAAG
GAGGGAACTGACGCGAGACCAAAATTGTTTTATCTGTTCAGCTGACCACA
AGCAGGAGGCAACCAAATCCGGTTGATCCTTACTTTGCTATATACGATGA
CGTCACGACCACACACCGTCGAACAACCCGAACTGTCGCCGTCCACCCGT
CTCGTTTGACCCGACTCGATGGTTGTGGCTTTTGGGAGTTGAGCTTGAGC
GATCTTTCTTTTGCATTGCGTGGTGTGATGAATCGATTGATCGGTCGATC
GTTCAGCCAAATCAAAGTTGTTGGCAATATGACTAAGGCCGGGTCTTATC
GGAATACAAAAAGTTAAATTTCAGCCGATTTAAATTTATATCGAGTTCTG
TGTGGTCGAAAGCTAAATAACGCCTAGCCTTTGTCCAATCAGAGCCCGAT
TTAAACTTAAATCGGCTGAAAATTGAAATTTTTGTATTCCGGTAAGACCC
GACCTAACCGCGTGTCGCAAAGAGTAGGATATAGGCTATAGAGCTAGAAG
GCGTGAACCAAGGAAGCATGGGTTGATATATAATATTTCTTAGGACCACA
TGCTATGGCGAGATGCTATGGCGAGATGGTCAACGAACGTTGCACCATGC
AGGATTATACATTTTGGTAGATTTGCAAGCTGGCGTGATCGGTATCGATA
CTTTTTGTTTTATAAATGTTTAATTAACCCCCCACCCCCCACTACGCAGC
TACTGCAGGCGGTACACATATATATTATATACTACATCGGGTACTGTAGC
ACACCAGTTAACCCCTCACTATTACTGCCTGTTCCTTTTTTCACATTTGA
ACACCCCGGGAATCGCGCGCGTTCTTCCATGGGTTGGGTAGCTCCGGAAG
ATTGTCCTTCGCCACTGTGGCCGAGCGTCGTCTCACTGAACAGCAGATTC
GAAATCAGCACATTCCGCTTCCCGCTCCCGGGACACCCATATCTACTAGG
TGAGTCTTTCTCTCTGAGTATGAGGGTAGTGTGTCTTTCGTTGATCATAA
TAAGCGAATAGGCCTTTTCGTATGGTCATCTACACCATTTCCACTACTAA
TACTACTACTATTACTACTACTACTACTACTACTACTACTACTACTACTA
CTACTACTTCTGCTACTACTATTACTACTACTACTACTACTACTACTACT
ACTACTACTACTACTACTATTACTATTACTACTACTACTATTACTACTAC
TATTACTACTACTACTTCTAGTACTTCTGCTACTACTATTACTAGTAGTA
GTATACAACTTGATACCTCCTTAGGAGGATCAATACGAGTGGTATAGAAT
GACTAGGATGACAGGGCTGGATTGCGCGGTTATGTGCAATTAAAAAAACC
CCTACTATTACTACTACTAACATCAATACCAATAATAATGTGCGCCATTT
TCGAGTCTAATACGTTTAATGTATCGTATTTTGTTTTGTGTGCATATATT
TAATGTGCGTGTTGTGTGCGTGTGACGTCAGGCGCCGTCATCAATATCGG
CGAGGGTCTCGTTTTTCAGCAAGGCGTCTTCCTGTCGGGGAACGGGACAG
TGACAGCGGCAGCGACTACCAGGTTTGCTTGCTGAGAGGGATAAAGAGGC
GGGAGGGGATGCGTGCTCCACCTCAAGCTCTCAAGTCAAAGTCAAGTGTC
ACAAAAAGGCACACCTCTGTGCCTTAATTCTCTGGCTTGATGCCTTGGTC
TCAACGAAAGCTGGAGCGCCCTGTGCAGCCAAGCGTTGTGATACAAACCC
GTTGTCATCCACCCTATCTCACAAGCTTCACGTTGGTCTTCTGGTTTTCT
CAAATATCTCCCTACGCCACGTCATACCACCACATCCCCTCTCCCCTCAT
CCCCTCTGGCCCGGGGACAACGAGTAACTTGCTCCATCGTTTCTTTTCCT
TTCCTTGAGTGATACCTTCGACTTGCCTTGCGTTTGGTTACGTCACTCGT
CGTTACTAGCAGGACCGCCATCAACAACATCCGCCGGATGGCATGGGGGT
TCTGGGCAGCGGCATGGTGGACCCCCACGTGGAAGGCGAGATTCAGCAGG
TGGAAGATCTGATGCTTATGGAAGCCTTGAGGCTATCCGTGCTGGAGGAG
CAGGCCAGGAGGGAAAGGCGAGTCGGTCTTACATCCTTTCATTGCCAAAG
TCTATAGCCCGCCCTCCTGTTGTCGGTAACCTAGCTGTCAGGTTTAAGCC
TCAGCCCCCGCCAGCGGCTCAGACACGAGAATCTTACGGAGAGGGGTGTG
TATTCTTCCTCGAAACAAAGCCTTTTTTAGGGTAAACGCAACCAAGTACG
ACTCAAGTCATTGTAAGCACGTCTCGTCTATCCTCTTCTATAGAGACTCG
TCTAGTTCAGTCCTATCATTAGTTGACGATGTGCCGGAGTGGTGAAGAGT
TAGCAGCGCGATTTAAAAAAAATGTGTAACAGCGAGAGTGAACCGGGGAA
GGTTAGGCACGGAAGATCCCCTGTGGTCACCGGCGGGACGGGCGGCGTAA
CGATGGCTGGGATGTAAAGTTAACCGGGCACGTTGAGTGACCTGGTGCCA
TATCAACAGAAAGTGATATCAGACAGTTATTGCTGTTGGGGAGATGCGAT
GTGCGTCCCGATGCCCTCTCACCGATGGCATGTTTTTTCTTCTCTTTGGA
AGGTCTGGGGACATGCGAAGGGCCGCCGCAGCCGCCGCAGCAGCCACAGC
CGGGGGTGGGCCGGGGGGGAGTTCGGGAGCGGTGAGGGACTTAGCTGCGC
CCACCGTTGATGATGCCGTGTTTGTGTTGTGCTAATGATGCTGCTGCTTG
TGCTGATGATTGAGCTCCCGCGTTGATGCTGCTGTTTTTGCATTGATGAT
TAGTGTTGCTTGCTATGTAGCAATGGTTTCCGTTGATGACGTTCCTTGCG
TTGATGATTGATGATGCTGGCTGCGTTGATGTTTTCCGGGCCACACGTCG
TTTCTCGCCGCACAAGCAGCACGAACGTGCACCGGAAAGGAAGAAGAGAA
TGCGCTGCTGTAGTCGCTCTTTCTCTGTCTCCCTACTCTCCGACTCCGCA
CGTGCGTGGCGACCGAGCGAACAGACTGGACACAAAACCCCAACCAGTAC
GAACGACCGATAAGGCTCACGCCGCATTGCCGAGAAATCAGTCCATTCGT
TGCACCCTCATAAATGTTTTTAACACAGTACAGTAGGGTAATCTCCCCCC
CCCCTTTCACCGCTTTGGGATGGAACTCCCGTAGGCGTCATCGGCGTCCC
TTGGAGCCAGGCTATCGGGAAGCTACTGGAATAGCCTCCTCCCGCCTGTT
AGGGCTGCCTCGACTTCGGCTACGGCGGGCGATTCATTGTCCTCTGCCTC
CGCCTCCGCCTCCGAGCCGATGAGTTTTTTGTCGGGAGGTGGATTGCCTA
GGTGGCGCGACGTGGAAGGGATACAGAGAGACTTGATGGCGACCGGAGAC
GGTAGCGGCCTCAGCACTAGGAGGGGCGAGGAGGCTACAGTGACGGCCTT
GACGGTAGAGACTTCCGGAACGGCTGCTGCTCCGGAAGCTGGTGCCGTTG
AGGCCTTGAGACGAGTTCTGCCCGCTCGGGAGCAGGAGGGGAGGTCGGGA
GAAGGGTCTGGTACTGCCGCTAGCGCTAGCGGTAACCCTGCCCCTGTATC
TGTCGCACCAAACCATTCCGACGCGACCCCACCGCTTGCCGCGTCTATGG
GCGAGAGATCGCTCAGCTTCAGGCAGCAGCAACAGCCGGAGAGCGCGTTC
ACAATCGAACAATCTCCGCACACCACCAGGGCCCCCATAGCTGTGGGAGA
GGCGGAAGCGGGGGGAGGGAGAGGGGGGAACGGTAACGGAAGATCGGCGC
GATATGGAGGAATGAACGCGGCTGCGGGAGGTGACTCTTGCGCGAGGGGG
CGAGACTATGGCTCTGAAGTCGGGGGGCGAACTGCTCGTGCTGCGGCGGC
GGAGGCGATAACGATCGCGAGGGAAAATGCGATGGAAGGGTATCTCTCGG
AGCTCCCGGAGTCAGAAGAAGAGCAGCTCGAGATCGCCATCGCGCTCAGC
TTGCGTAGCAGCGGCAACGGCAACAGTGATGGCAACATGCGCGCAAGAAT
CACTGGCGCGGGAGATCTGGAAAGGATGTTGGAGGATCCCGGAGGAGGAA
GCAGCACCAGTGGTATTTTTGGGTCTGAGACCTCGACCGTTACCCCCTTC
GCATCATCAGGCGGTGGAGGCGCCGCTGGAGACGCGTCACCTACGGAAGG
CGATTTGGTGAGGGCCGCGAGGTTGGCAGGACTCGGCAGCCTTGACGAGG
ACTTCACCACGGACCCCTTGGCGGCGGAGGAGATGTGGAGCATCACCGCG
GATGGAGAAGGAGTGAGTCGTGGACGCGGTGTCGTGTCCCAACCCCTGTC
CGCCCCGAATCCTAAACAGACGTACCAGAGAGAGATGAAAGTACCCGTTG
AACCAAGCGCCAGGGTATCTCGCGTATTATGAAGACACGAGTTCTGGTGT
GGGGGCGTTTTTTTTATACGTCATCTAGCGGCGTGTCACGGTTATAAATA
TATTAGAGCTTAGGTTAGGCTAATTATTTTCCCTTAGGTTTACGAAAGAG
GTGACTGAGGTTTTGTGGAGAAGAACTTCATTAAGGCCCGTGTTTCGCTC
ATTTTTGTTTTTAAATTGTGGCGGTAGCTTGGGGGCCTCGATTGCACATC
CCTGAGATTTTCAAAATACCCTTTAAGGTGCGCGCCCTTCGCATGCAACC
CCCCTCTCCACACACTTCCCTGAAAACGCCGGTCTGTTTTTTTTAACGTA
TCTTGAAGAGCATGTACAAATGTTGTCGAAGCCGTCCAGCACCCACGCGT
ATTTGGTTCGTAAAGATGTCACGTCTTTATACATGATATTGCTCACCCGC
CCCTCGCTCTTGATAACGATATTGATAATACACGCTCTCGTGGGAGAAGA
AGAAGGAGGAGGTGTCCTCGTTCGATTCGTCATTGTTCTCCGTTTCTTCG
GAGGCACCGGCATCGTCGGCCGCTGCCGCTGTCGGTGGCTGCGACGCCCG
GTCCTTCTCCCGCCCGCCGCCGCAAGGCGCTCGAGAGGAAGAAGAGGTCG
TGCGCAAGCTTCCCGCATCAACGCTGGAGGGCGAAGGCTCGAGCTCTGGC
ACCACCGATGCCTTTGAAGCCGCTGTGGCGGATTTCTCCGCTTTTGCCTC
AGCCGCGACCGGCGCGGGGCCTTTTGCTCCCGGGCCAATTTTGTCGGAGG
AGGAAGAGAAGAAAGAGGAGAATACTTCCCGCCTCCAAAGGGCGACGCGC
AGAGGTGGTGACGGTGCATCCGCTGAGGAACGCTTGGAGTCGAGGTCGGT
GGCGGCAAGTAGTGTTCATGGTGCGAGCGGTCCGAGTAAAGCTGGAGAGC
GGCAGCTCGAGGGACTGGTGTCGGAAAGGGTGGGCTCTACCCCAATCTTT
ACTGCTTCCTCTATCGCTGCTTTTAGCTCTGCCGCTTCGTGCATTGCCGA
GATCGGCGGTGGGCACGGTGTGGATGGAGACTTTGCGGTGGCTGAGAGAG
ACGACGGTGGAGGGGTACAAGTACCCGCAACCGGGTCAGGTGTTCCGAGT
ACCGAGATCCTTGGTGCAGCAGTAACAGCGGAAGAAACTTCACCGGAGAC
GGCGGCTGCAGAGGTCGGGTCTGGGGTCGAATCGATAGGAGTTCAGATGG
GTGTTGGAGGATCGAACGAGGCGGGAAAGGTGAGACTGCTTCTCAATCTT
TGGCAACTCCCGAGTAGGGAGCAGTGAAATGGGATCCTCGAATCAATCTC
GCGCCAGATGTAGAGGTGGTGTGTGGTGCTTTTCACTCCGGCCCTGCCAA
CCCCCGCAAAAAAAGGCGGGGATTTTTCGGGGAGAATTGTCTGGCGATAG
TGAGGGCGTTCGAAGTATGCAAGTAGTTGCCCATGAATGCGATATACATG
TTTTCGCCGCTCGAATGGGACAATCGAAAGAATACTTTACTGTGGTATGC
GTTTTTGCTGCCGCGGGTTTTGTAATTGACGGTTTTCCGGAACGATGTGA
TCCCATCCCATCTCATGAATCATTGGATCAGCCAATACTTGCGCGGTAGG
AATCAGCAAGAAAATTACTTAACTCTTGCCCCCATCTTTTGCCCTTTTTT
TTGCCCTGGCCGCGCCATCTTTTGTCTCAATATCACCGTGTGCCTCTTGT
GTGTGTTTTGTTTCTCCTGTCTGTTTCCGTTGTTTTCTTTCTTTGTCGCC
GGCCCTCTCTACTTCCGCTTTTCTTTGTATCTGTCTTTTTTTTTTACACT
TGTTTCCTGGTATATTTTTACCTCTGTTTCTGTACAATTTTAAAACGGCG
GAAAATCGACGACGACGACCTACCAACCGACGGGATCTGTGGCCGCTCCA
TCATCCTATGGATTTACCTGTCACTCTACAATCCCATCCACCAATTCATC
ATCGTATCGATTCCGCCATCCCACCTTCCATTCCACTATGCTATTTACTA
TTCCACCATCCCACCTACCATTCCATCATCCCCAAATTTTGTAGGAGGCG
AGCGGCGCTCCGGCGTGAGCCGACCGGGTTTGAGAAACAAGAAAGAAACC
TTGAGTTGTGTGTCTTGTGTATCTGTGAGGCCAAGGACGATTCGCAGTTT
TTCTGTATATGCGCTAATGTCATGCTGGAGTCGGACGCCCCCTCCCCTGC
CCTCCCCCTCCCCTCGAGGATAGTAGTATTATATTTCCCCCTACTTACAT
TACCAAACCATGGTGCCTTTGTTTGGGAGATCTCGTCGAGAAGTATGTTG
TGTTTAAGCTTCTTTCTCTGCGCCAGTAACCTCTGTGCTAAGGAATACGA
GAGGATGTCTGTCCGGAGGCAGGGGGAAATTCTCCCAGACTATCATACGG
CACTGTAGTTGGAATTCTGTGAAGGGGGTAAAAACGAAACAAGACTAGCA
ACAACTACATCAGCGTTCGTTTGATTTTGTAACGTAGTACATTCCAGATA
TTTCCCTGGGTGGTAAGGCGGTGCCATCTGCTTGTATAATCCCCACAAGG
CGCTTTTCTGCTAATGATCGATTTGTATGGAGCATGGAATAGGGTTGGGG
GAGGCAAAGAGGGCACGGAGAAGTGAGATGAGTCCTTGTCGATGTTGCTC
CTGCCCAGCGCACGCGCACTGTCGATAGCGATCCGGCGCGATTCTCGTAA
CGCCATCGTCGGGTTTCCAATGACACTTCTACGTGCGGTACATAGCGGCA
ACGCCAGCGATATCTGTGGCAACCACTGCCTTACGATACAGTACCGATAC
AGTATCGATACAGTACCGATGTGGGCGACCATTAAATAATACAGTACCAA
TGTGCGTGTGCGTGTTTCTTCGGAGTATAAGTATGTTGTGTGTGTTGTTG
GGGTCGATCGATCGAATCGAAGGGCCATGAATTGGGTTGGGTTGATTTGT
GTACCGTCCGTGCCTTGTCTTGGGAAGAAGTATAATAGGTATAATGCGCT
GTTTGTAAGCCGGTTATAACAAGAAGCATGTATTTGGGGGGGGGCGAGGT
AGAGCGACGGAAGTATAAAACTATGAGCCCAACTCAAGAGCTCTCGTAGT
ATTAGTGCCGTGACTCCTCCCGGTGAGGCGTAGGTATCCGTAATAGGATG
AGTGTACAATGGTTACTGGTTATAGAAGTTGTAAATAACTTACATTCGTG
TAACATGAAAAAAATGAAAACGTATGCAAAGTGGGTGGTGGGCGCTTCCT
CGCCACCCCATCGATGGAAACATGTCTATCTTACCCTTTCCCTATTAGCT
CTACATTAGCTCTGCATAGCTCTACATAGTTGGTAGCATCGACAAGAAGA
AAGGTGAGATACGTTTAGAAGGAGTTTTGCAGCTGCAGTATCGGGTAAGG
TGTGTTTTATGTTTTGTTTTTTGCGGGATGTGCTCTATTTAATATATATG
GTTTTATGTATCTGTGGTCATGACGTCACCATTCATCGCAAGTGATCAAC
CG
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Coding sequence (CDS) from alignment at H-elongata_contig6402:1348..10299-

>mRNA_H-elongata_contig6402.13990.1 ID=mRNA_H-elongata_contig6402.13990.1|Name=mRNA_H-elongata_contig6402.13990.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4998bp|location=Sequence derived from alignment at H-elongata_contig6402:1348..10299- (Himanthalia elongata Himel1 dioecious)
ATGCGCCAGATCGAGGAAAGGAAGCTGAGGGATAACGACAGCACCGGTGC
CACCGCTGCTGCTGATGCCTCCGGCGGAGGGGCTGTAGGAGCGGAAGCCT
CCAAGACGGGATCGGGACCTCGTCCGTCGGCATCATGCGCCAGATCGAGG
AAAGGAAGCTGAGGGATAACGACAGCACCGGTGCCACCGCTGCTGCTGAT
GCCTCCGGCGGAGGGGCTGTAGGAGCGGAAGCCTCCAAGACGGGATCGGG
ACCTCGTCCGTCGGCATCCTCCGGAAGATTGTCCTTCGCCACTGTGGCCG
AGCGTCGTCTCACTGAACAGCAGATTCGAAATCAGCACATTCCGCTTCCC
GCTCCCGGGACACCCATATCTACTAGCTCCGGAAGATTGTCCTTCGCCAC
TGTGGCCGAGCGTCGTCTCACTGAACAGCAGATTCGAAATCAGCACATTC
CGCTTCCCGCTCCCGGGACACCCATATCTACTAGGCGCCGTCATCAATAT
CGGCGAGGGTCTCGTTTTTCAGCAAGGCGTCTTCCTGTCGGGGAACGGGA
CAGTGACAGCGGCAGCGACTACCAGGCGCCGTCATCAATATCGGCGAGGG
TCTCGTTTTTCAGCAAGGCGTCTTCCTGTCGGGGAACGGGACAGTGACAG
CGGCAGCGACTACCAGGACCGCCATCAACAACATCCGCCGGATGGCATGG
GGGTTCTGGGCAGCGGCATGGTGGACCCCCACGTGGAAGGCGAGATTCAG
CAGGTGGAAGATCTGATGCTTATGGAAGCCTTGAGGCTATCCGTGCTGGA
GGAGCAGGCCAGGAGGGAAAGGACCGCCATCAACAACATCCGCCGGATGG
CATGGGGGTTCTGGGCAGCGGCATGGTGGACCCCCACGTGGAAGGCGAGA
TTCAGCAGGTGGAAGATCTGATGCTTATGGAAGCCTTGAGGCTATCCGTG
CTGGAGGAGCAGGCCAGGAGGGAAAGGTCTGGGGACATGCGAAGGGCCGC
CGCAGCCGCCGCAGCAGCCACAGCCGGGGGTGGGCCGGGGGGGAGTTCGG
GAGCGGTCTGGGGACATGCGAAGGGCCGCCGCAGCCGCCGCAGCAGCCAC
AGCCGGGGGTGGGCCGGGGGGGAGTTCGGGAGCGGCGTCATCGGCGTCCC
TTGGAGCCAGGCTATCGGGAAGCTACTGGAATAGCCTCCTCCCGCCTGTT
AGGGCTGCCTCGACTTCGGCTACGGCGGGCGATTCATTGTCCTCTGCCTC
CGCCTCCGCCTCCGAGCCGATGAGTTTTTTGTCGGGAGGTGGATTGCCTA
GGTGGCGCGACGTGGAAGGGATACAGAGAGACTTGATGGCGACCGGAGAC
GGTAGCGGCCTCAGCACTAGGAGGGGCGAGGAGGCTACAGTGACGGCCTT
GACGGTAGAGACTTCCGGAACGGCTGCTGCTCCGGAAGCTGGTGCCGTTG
AGGCCTTGAGACGAGTTCTGCCCGCTCGGGAGCAGGAGGGGAGGTCGGGA
GAAGGGTCTGGTACTGCCGCTAGCGCTAGCGGTAACCCTGCCCCTGTATC
TGTCGCACCAAACCATTCCGACGCGACCCCACCGCTTGCCGCGTCTATGG
GCGAGAGATCGCTCAGCTTCAGGCAGCAGCAACAGCCGGAGAGCGCGTTC
ACAATCGAACAATCTCCGCACACCACCAGGGCCCCCATAGCTGTGGGAGA
GGCGGAAGCGGGGGGAGGGAGAGGGGGGAACGGTAACGGAAGATCGGCGC
GATATGGAGGAATGAACGCGGCTGCGGGAGGTGACTCTTGCGCGAGGGGG
CGAGACTATGGCTCTGAAGTCGGGGGGCGAACTGCTCGTGCTGCGGCGGC
GGAGGCGATAACGATCGCGAGGGAAAATGCGATGGAAGGGTATCTCTCGG
AGCTCCCGGAGTCAGAAGAAGAGCAGCTCGAGATCGCCATCGCGCTCAGC
TTGCGTAGCAGCGGCAACGGCAACAGTGATGGCAACATGCGCGCAAGAAT
CACTGGCGCGGGAGATCTGGAAAGGATGTTGGAGGATCCCGGAGGAGGAA
GCAGCACCAGTGGTATTTTTGGGTCTGAGACCTCGACCGTTACCCCCTTC
GCATCATCAGGCGGTGGAGGCGCCGCTGGAGACGCGTCACCTACGGAAGG
CGATTTGGTGAGGGCCGCGAGGTTGGCAGGACTCGGCAGCCTTGACGAGG
ACTTCACCACGGACCCCTTGGCGGCGGAGGAGATGTGGAGCATCACCGCG
GATGGAGAAGGAGCGTCATCGGCGTCCCTTGGAGCCAGGCTATCGGGAAG
CTACTGGAATAGCCTCCTCCCGCCTGTTAGGGCTGCCTCGACTTCGGCTA
CGGCGGGCGATTCATTGTCCTCTGCCTCCGCCTCCGCCTCCGAGCCGATG
AGTTTTTTGTCGGGAGGTGGATTGCCTAGGTGGCGCGACGTGGAAGGGAT
ACAGAGAGACTTGATGGCGACCGGAGACGGTAGCGGCCTCAGCACTAGGA
GGGGCGAGGAGGCTACAGTGACGGCCTTGACGGTAGAGACTTCCGGAACG
GCTGCTGCTCCGGAAGCTGGTGCCGTTGAGGCCTTGAGACGAGTTCTGCC
CGCTCGGGAGCAGGAGGGGAGGTCGGGAGAAGGGTCTGGTACTGCCGCTA
GCGCTAGCGGTAACCCTGCCCCTGTATCTGTCGCACCAAACCATTCCGAC
GCGACCCCACCGCTTGCCGCGTCTATGGGCGAGAGATCGCTCAGCTTCAG
GCAGCAGCAACAGCCGGAGAGCGCGTTCACAATCGAACAATCTCCGCACA
CCACCAGGGCCCCCATAGCTGTGGGAGAGGCGGAAGCGGGGGGAGGGAGA
GGGGGGAACGGTAACGGAAGATCGGCGCGATATGGAGGAATGAACGCGGC
TGCGGGAGGTGACTCTTGCGCGAGGGGGCGAGACTATGGCTCTGAAGTCG
GGGGGCGAACTGCTCGTGCTGCGGCGGCGGAGGCGATAACGATCGCGAGG
GAAAATGCGATGGAAGGGTATCTCTCGGAGCTCCCGGAGTCAGAAGAAGA
GCAGCTCGAGATCGCCATCGCGCTCAGCTTGCGTAGCAGCGGCAACGGCA
ACAGTGATGGCAACATGCGCGCAAGAATCACTGGCGCGGGAGATCTGGAA
AGGATGTTGGAGGATCCCGGAGGAGGAAGCAGCACCAGTGGTATTTTTGG
GTCTGAGACCTCGACCGTTACCCCCTTCGCATCATCAGGCGGTGGAGGCG
CCGCTGGAGACGCGTCACCTACGGAAGGCGATTTGGTGAGGGCCGCGAGG
TTGGCAGGACTCGGCAGCCTTGACGAGGACTTCACCACGGACCCCTTGGC
GGCGGAGGAGATGTGGAGCATCACCGCGGATGGAGAAGGAAAGAAGGAGG
AGGTGTCCTCGTTCGATTCGTCATTGTTCTCCGTTTCTTCGGAGGCACCG
GCATCGTCGGCCGCTGCCGCTGTCGGTGGCTGCGACGCCCGGTCCTTCTC
CCGCCCGCCGCCGCAAGGCGCTCGAGAGGAAGAAGAGGTCGTGCGCAAGC
TTCCCGCATCAACGCTGGAGGGCGAAGGCTCGAGCTCTGGCACCACCGAT
GCCTTTGAAGCCGCTGTGGCGGATTTCTCCGCTTTTGCCTCAGCCGCGAC
CGGCGCGGGGCCTTTTGCTCCCGGGCCAATTTTGTCGGAGGAGGAAGAGA
AGAAAGAGGAGAATACTTCCCGCCTCCAAAGGGCGACGCGCAGAGGTGGT
GACGGTGCATCCGCTGAGGAACGCTTGGAGTCGAGGTCGGTGGCGGCAAG
TAGTGTTCATGGTGCGAGCGGTCCGAGTAAAGCTGGAGAGCGGCAGCTCG
AGGGACTGGTGTCGGAAAGGGTGGGCTCTACCCCAATCTTTACTGCTTCC
TCTATCGCTGCTTTTAGCTCTGCCGCTTCGTGCATTGCCGAGATCGGCGG
TGGGCACGGTGTGGATGGAGACTTTGCGGTGGCTGAGAGAGACGACGGTG
GAGGGGTACAAGTACCCGCAACCGGGTCAGGTGTTCCGAGTACCGAGATC
CTTGGTGCAGCAGTAACAGCGGAAGAAACTTCACCGGAGACGGCGGCTGC
AGAGGTCGGGTCTGGGGTCGAATCGATAGGAGTTCAGATGGGTGTTGGAG
GATCGAACGAGGCGGGAAAGAAGAAGGAGGAGGTGTCCTCGTTCGATTCG
TCATTGTTCTCCGTTTCTTCGGAGGCACCGGCATCGTCGGCCGCTGCCGC
TGTCGGTGGCTGCGACGCCCGGTCCTTCTCCCGCCCGCCGCCGCAAGGCG
CTCGAGAGGAAGAAGAGGTCGTGCGCAAGCTTCCCGCATCAACGCTGGAG
GGCGAAGGCTCGAGCTCTGGCACCACCGATGCCTTTGAAGCCGCTGTGGC
GGATTTCTCCGCTTTTGCCTCAGCCGCGACCGGCGCGGGGCCTTTTGCTC
CCGGGCCAATTTTGTCGGAGGAGGAAGAGAAGAAAGAGGAGAATACTTCC
CGCCTCCAAAGGGCGACGCGCAGAGGTGGTGACGGTGCATCCGCTGAGGA
ACGCTTGGAGTCGAGGTCGGTGGCGGCAAGTAGTGTTCATGGTGCGAGCG
GTCCGAGTAAAGCTGGAGAGCGGCAGCTCGAGGGACTGGTGTCGGAAAGG
GTGGGCTCTACCCCAATCTTTACTGCTTCCTCTATCGCTGCTTTTAGCTC
TGCCGCTTCGTGCATTGCCGAGATCGGCGGTGGGCACGGTGTGGATGGAG
ACTTTGCGGTGGCTGAGAGAGACGACGGTGGAGGGGTACAAGTACCCGCA
ACCGGGTCAGGTGTTCCGAGTACCGAGATCCTTGGTGCAGCAGTAACAGC
GGAAGAAACTTCACCGGAGACGGCGGCTGCAGAGGTCGGGTCTGGGGTCG
AATCGATAGGAGTTCAGATGGGTGTTGGAGGATCGAACGAGGCGGGAAAG
GAGGCGAGCGGCGCTCCGGCGTGAGAGGCGAGCGGCGCTCCGGCGTGA
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