mRNA_H-elongata_contig63872.13966.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: D8LMB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB5_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.690e-69 Identity = 109/137 (79.56%), Postives = 120/137 (87.59%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAALK 411
QEG+NPLSGWKPSVPEGQRLELG+E +DALE GLDQVK CGFVLVAGGLGERLGYGDIKLRLPSE+CTMT+YL+LY QILHL+ +GDG K PLAIMVSDDT T+EMLEQ WFGM E QITLMKQEKVAA++
Sbjct: 108 QEGSNPLSGWKPSVPEGQRLELGSEHYDALEKEGLDQVKHCGFVLVAGGLGERLGYGDIKLRLPSESCTMTTYLQLYIGQILHLQARYGDGRKFPLAIMVSDDTRDRTQEMLEQGGWFGMEEGQITLMKQEKVAAIQ 244
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A6H5K5T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T5_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.630e-68 Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAALK 411
QEG NPLSGWKPSVP+GQRLELG+E +DALE GLDQVK CGFVLVAGGLGERLGYGDIKLRLPSE+CTMT+YL+LY QILHL+ +GDG KLPLAIMVSDDT T+EMLEQ WFGM EDQITLMKQEKVAA++
Sbjct: 108 QEGRNPLSGWKPSVPDGQRLELGSEHYDALEKEGLDQVKHCGFVLVAGGLGERLGYGDIKLRLPSESCTMTTYLQLYIGQILHLQARYGDGRKLPLAIMVSDDTRDRTQEMLEQGDWFGMEEDQITLMKQEKVAAIQ 244
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A836CL41_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL41_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.790e-44 Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 4 EGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAALK 411
EG NPL GW PSVPEG LE G+ + LE +G +V CGFVLVAGGLGERLGYGDIKL+LP+E CT TSYL LY QI L+T +G+G LPLAIMVSDDT T L+ + FG+ Q+TL+KQEKV A++
Sbjct: 95 EGVNPLDGWSPSVPEGVALEPGSARYAELEEKGGGEVGACGFVLVAGGLGERLGYGDIKLKLPTELCTETSYLTLYCAQIQALQTRYGEGRLLPLAIMVSDDTADKTSAELDAHQHFGLDPKQVTLIKQEKVPAIQ 230
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A7S2R0S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0S6_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.030e-43 Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGD-GHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQ 390
Q G NPL GWKPS+P+G+ LELGTE FD E+ GL +V RCGFVLVAGGLGERLGYGDIK+ LP+E T TSY++ Y IL ++ F KLPL IM S+DT T ++LE+ +FGM +DQIT+++Q
Sbjct: 116 QRGENPLDGWKPSIPQGEILELGTEKFDDFESCGLKEVGRCGFVLVAGGLGERLGYGDIKIGLPTEMATETSYIQFYIETILAFQSKFAQPNQKLPLCIMTSNDTNAKTVQLLEEKNYFGMEKDQITIVQQ 246
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A7S3JVS8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVS8_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.110e-41 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 7 GTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAAL 408
G NPL GW PSVP G+ LE G+EA+ E G+ + K+CGFVLVAGGLGERLGY IK+ LP ET T SYLE Y + IL L+ KLPLAIMVSDDTE T+EML ++FG ++QITL+KQEKVAAL
Sbjct: 72 GDNPLDGWVPSVPTGESLEFGSEAWAEHEMVGVIEAKKCGFVLVAGGLGERLGYSRIKIELPIETLTKISYLEYYIKYILALQQKSKTNLKLPLAIMVSDDTEAMTKEMLIANKYFGAAKNQITLLKQEKVAAL 205
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A7S3M9Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9Y7_9STRA) HSP 1 Score: 151 bits (382), Expect = 6.120e-41 Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGD-GHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAAL 408
++G NP GW+P VP G +LE TE + E G+ ++ CGFVLVAGGLGERLG+ IK+ LPSET T TSYLELY QILH++T + G +LPLAIMVSDDT T E+LE +FG+ +DQ+T++KQ KV AL
Sbjct: 115 KKGENPFEGWRPEVPTGVKLEPVTEEYVRYEQAGIRELGHCGFVLVAGGLGERLGFSGIKVALPSETVTNTSYLELYCSQILHIQTRYAAAGMQLPLAIMVSDDTITQTTELLEAKNYFGLKKDQVTILKQGKVPAL 251
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A7S0GNZ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GNZ5_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.990e-41 Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFG-DGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQ-EKVAAL 408
+ G NPL GWKPSVP+G E+GT ++ E G++Q+ +CGFVL AGGLGERLGYG IKL+LP+E T T YL+ Y IL ++ + GHKLPL IMVS DT K T +L + + FGM +DQIT+++Q E V AL
Sbjct: 48 KSGVNPLMGWKPSVPQGMNFEIGTTDYETTEKIGVEQLGKCGFVLTAGGLGERLGYGSIKLKLPTELATETCYLQFYIETILSIQKKYAAPGHKLPLCIMVSGDTNKKTISLLAKNKNFGMDDDQITIVQQGEGVPAL 185
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A8J9S4W7_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S4W7_PHATR) HSP 1 Score: 142 bits (358), Expect = 6.700e-39 Identity = 66/130 (50.77%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQ 390
+EG NPL GW+PSVPEG+R +LGT+ F+ E+ G ++ + GFVLVAGGLGERLGY IK+ LP+E T T YL+ Y IL ++ +G+G +LPL IM S DT + T ++L + +FGM + QIT+++Q
Sbjct: 77 REGVNPLEGWEPSVPEGERFDLGTKEFEETESTGRPELGKVGFVLVAGGLGERLGYSSIKVGLPTEMATETCYLQYYIEYILAVQVKYGEGKRLPLCIMTSGDTNEKTAKLLRKNNYFGMQKSQITIVQQ 206
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: A0A2K3CY14_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CY14_CHLRE) HSP 1 Score: 148 bits (373), Expect = 1.210e-38 Identity = 78/136 (57.35%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEKVAAL 408
+EG NP G+ P+VP G+RL+ G+ F ALEA GL Q FVLVAGGLGERLGY IK+ LPSE T T +L LY + IL L+ G G KLPLAIM SDDT T E+L + +FGM E Q+TL+KQEKVA L
Sbjct: 179 KEGVNPFEGYVPAVPAGERLDFGSGPFLALEAEGLAQAGAAAFVLVAGGLGERLGYSGIKVALPSECATGTPFLGLYIQTILALQARSGSGRKLPLAIMTSDDTHGRTLELLRKNSYFGMEESQVTLIKQEKVACL 314
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Match: K0S7V2_THAOC (C3H1-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7V2_THAOC) HSP 1 Score: 145 bits (367), Expect = 7.660e-38 Identity = 70/132 (53.03%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLGERLGYGDIKLRLPSETCTMTSYLELYARQILHLETSFGDGHKLPLAIMVSDDTEKNTREMLEQARWFGMGEDQITLMKQEK 396
+ G NPL GW PSVP+G+ E+GT F E GL +V +CGFVLVAGGLGERLGYGDIK+ LP+E T T Y++ Y IL ++ + +G KLPL IM S DT + T +L++ +FGM EDQIT+++Q K
Sbjct: 305 RRGENPLEGWTPSVPQGEAFEVGTAEFLEAEGIGLGEVGKCGFVLVAGGLGERLGYGDIKIGLPTELATGTLYIQFYVETILAFQSRYAEGKKLPLCIMTSGDTNEKTVALLKKNNYFGMDEDQITIVQQGK 436 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63872.13966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63872.13966.1 >prot_H-elongata_contig63872.13966.1 ID=prot_H-elongata_contig63872.13966.1|Name=mRNA_H-elongata_contig63872.13966.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp QEGTNPLSGWKPSVPEGQRLELGTEAFDALEARGLDQVKRCGFVLVAGGLback to top mRNA from alignment at H-elongata_contig63872:1547..3424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63872.13966.1 ID=mRNA_H-elongata_contig63872.13966.1|Name=mRNA_H-elongata_contig63872.13966.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1878bp|location=Sequence derived from alignment at H-elongata_contig63872:1547..3424+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63872:1547..3424+ >mRNA_H-elongata_contig63872.13966.1 ID=mRNA_H-elongata_contig63872.13966.1|Name=mRNA_H-elongata_contig63872.13966.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig63872:1547..3424+ (Himanthalia elongata Himel1 dioecious)back to top |