mRNA_H-elongata_contig63495.13927.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig63495.13927.1
Unique NamemRNA_H-elongata_contig63495.13927.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A6H5L421_9PHAE (Alpha-mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L421_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.340e-93
Identity = 165/260 (63.46%), Postives = 190/260 (73.08%), Query Frame = 1
Query:    1 KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDIS---------GAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDE---VFSPFVPAFGEEEDGSTHSPPPP 744
            +VFS WVTQT+RLRRG+ +AE+DW+VGP+PVG    S          AAGKEVISRF A SLAS G FYTD+NGREFQRRVR+ RPTWDL+VTQPVAGNYYP T A F++DE  DG G  D +Q       LSVLTDRAQG SS ADGELELMAHRRLLT+DQRGVGEALNETTG                   M+H+PDWKREGDG+VFRGTHYL +S+K+DGM+ VR+LMDE   VFSPF+PAFG+E   +   P PP
Sbjct:  868 QVFSDWVTQTVRLRRGQAYAEVDWAVGPVPVGSSSSSPPSSDSATGXAAGKEVISRFWAPSLASKGTFYTDSNGREFQRRVRNERPTWDLDVTQPVAGNYYPATTAVFLRDEGDDG-GDEDEMQ-------LSVLTDRAQGVSSLADGELELMAHRRLLTDDQRGVGEALNETTGG------------------MTHFPDWKREGDGQVFRGTHYLVISKKRDGMKAVRSLMDEARQVFSPFLPAFGDEAGRADGYPLPP 1101          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: D7FJT1_ECTSI (Alpha-mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT1_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 6.010e-89
Identity = 160/248 (64.52%), Postives = 179/248 (72.18%), Query Frame = 1
Query:    1 KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGSTHSPPPP 744
            +VFS WVTQTIRLRRG                      AAGKEVISRF A SLAS G FYTD+NGREFQRRVR+ RPTWDL+VTQPVAGNYYP TAA F++DE  D +G  D +Q       LSVLTDRA+G SS ADGELELMAHRRLLT+DQRGVGEALNETTGA  A  PS      +P   MSH+PDWKREGDG+VFRGTHYL +S+K DGM+ VR+LMDEVFSPF+PAFG E   +   P PP
Sbjct:  851 QVFSDWVTQTIRLRRG----------------------AAGKEVISRFWAPSLASKGTFYTDSNGREFQRRVRNERPTWDLDVTQPVAGNYYPATAAVFLRDEEGDDEGDEDAMQ-------LSVLTDRAEGVSSLADGELELMAHRRLLTDDQRGVGEALNETTGAILATVPSVPLGPLMPE-GMSHFPDWKREGDGQVFRGTHYLVISKKGDGMKAVRSLMDEVFSPFLPAFGHEVGRADGYPLPP 1068          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S3H3R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3R4_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.850e-59
Identity = 109/244 (44.67%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASD---GVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGSTH 729
            FS + +Q +R+R G    EL+W+VGP+P+  G      GKEVIS+F+++    +      +TD+NGREF  RV ++RPTWDL V +P+AGNYYP+TAA +++D   D                L+VLTDR+QG +S   GE+EL+ HRRL+ +D RGV EALNETTG                   MSHYPDW R GDG    G HYL +S   DG+++VRTLMDE++ P VP F  E     H
Sbjct:  371 FSDYASQVVRVRDGSPVVELEWTVGPVPINDG-----IGKEVISKFTSNLRTGEKGRSKCFTDSNGREFMERVFNYRPTWDLEVYEPIAGNYYPLTAAMYIQDTTHD--------------QQLAVLTDRSQGGASLKSGEMELLIHRRLVVDDNRGVEEALNETTGG------------------MSHYPDWIRSGDGITVTGKHYLLLSSVSDGLKEVRTLMDELYLPLVPLFSAEPSTVKH 577          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S4N8T3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8T3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.120e-50
Identity = 97/224 (43.30%), Postives = 133/224 (59.38%), Query Frame = 1
Query:   16 WVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSP 687
            W+ Q  RLR+G+ + E++++VGPIP+  G      GKE+++R+  S + S GV YTD+NGREF +R R +RPTW+L   +PVAGNYYPV AAA+V+DE             +S+    +VL DR+QG +S +DG +ELM  RR+L +D RGVGE LNET G  +  PP GD                 R G+G V +G H + V     G R  R+LMD  +SP
Sbjct:   84 WMKQITRLRKGQPYVEVEYTVGPIPIDDG-----VGKEIVARYD-SGIQSRGVLYTDSNGREFVQRKRGYRPTWELKEYEPVAGNYYPVNAAAYVEDEXXXXXXXXXXXHRASM----AVLVDRSQGGASLSDGSIELMIQRRVLADDGRGVGEPLNETVGGVTPYPPYGDA---------------SRRGEGIVVKGVHRILVGEGGSGARLARSLMDRTWSP 282          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A388L3Z6_CHABU (Alpha-mannosidase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L3Z6_CHABU)

HSP 1 Score: 184 bits (467), Expect = 1.480e-49
Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAF 702
            FS W +Q IR+ +G+ HAE++++VGPIP+G G      GKEVI+RFS S LAS G FYTD+NGR+  +R  ++RPTWDLNVT+PVAGNYYPV AA ++ +E  D                 S+LTDRA G +S  DGELELM HRRLL +DQRGVGE LNET  A                 C            G V RG  YL +++     R  RT    V+SP +PAF
Sbjct:  728 FSDWASQVIRIYKGKEHAEVEYTVGPIPIGDG-----LGKEVITRFS-SDLASYGTFYTDSNGRDMLKRKINYRPTWDLNVTEPVAGNYYPVGAAIYLGNESSD----------------FSILTDRALGGASLHDGELELMLHRRLLVDDQRGVGECLNETVCAGGV--------------CQ-----------GLVVRGKLYLNLNQSVAAARWRRTEAQNVYSPLLPAF 912          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S2WUY8_9STRA (Alpha-mannosidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUY8_9STRA)

HSP 1 Score: 182 bits (463), Expect = 5.210e-49
Identity = 109/239 (45.61%), Postives = 135/239 (56.49%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGS 723
            FSSW+ QTIRL  G    EL+W+VG +P     I    GKEV+SRFS SS+AS   F TD+NGREF  R R  RP+WD  + +P+AGNYYPV    +V+DE                   L+VLTDR+QG SS A GE+ELM HRR L +D RGVGE LNET+   S      D D      C +      REG   V RGTHYL +++ +  +R +R    EVFSP V AF     G+
Sbjct:  759 FSSWLNQTIRLFPGSDTVELEWTVGEVP-----IEDQLGKEVVSRFS-SSVASGDAFSTDSNGREFLERRRGLRPSWDATIREPIAGNYYPVNMGIYVQDEEAQ----------------LTVLTDRSQGGSSLASGEVELMVHRRTLLDDSRGVGEPLNETSFITSY----ADTD------CAAC-----REGHALVARGTHYLQLAQPRQALRQLREKAQEVFSPVVTAFSSAGAGA 960          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7K6TCP9_CALNI (MA2B1 mannosidase (Fragment) n=1 Tax=Caloenas nicobarica TaxID=187106 RepID=A0A7K6TCP9_CALNI)

HSP 1 Score: 170 bits (430), Expect = 4.250e-48
Identity = 87/161 (54.04%), Postives = 109/161 (67.70%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNE 489
            FSSW +Q +RLR G+ + EL+W+VGPIPVG G      GKE+ISRF    L +DG FYTD+NGR+   R RD+RPTW+LN T+PVAGNYYPV    F+KD+++                 L+VLTDR+QG SS  DG +ELM HRRLL +D RGVGE L+E
Sbjct:   58 FSSWCSQVLRLRAGQRYLELEWTVGPIPVGDG-----WGKEIISRFETP-LRTDGRFYTDSNGRQILERRRDYRPTWNLNQTEPVAGNYYPVNTRIFIKDQKLQ----------------LTVLTDRSQGGSSVTDGSVELMVHRRLLQDDSRGVGEPLDE 196          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: M0ZVS8_SOLTU (Alpha-mannosidase n=9 Tax=Solanaceae TaxID=4070 RepID=M0ZVS8_SOLTU)

HSP 1 Score: 177 bits (450), Expect = 2.690e-47
Identity = 98/235 (41.70%), Postives = 135/235 (57.45%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEE 711
            F+SW++Q IR+ +   +AEL++++GPIP        + GKEVI++ +A+ +A+D VFYTD+NGR+F +RVRD+R  WDL VTQPVAGNYYPV    ++ D + +                LSVL DRA G +S  DGE+ELM HRRL+ +D RGVGEAL+E     S               C           +G   RG +YL + +  DG R  RT   E++SP + AFG E
Sbjct:  688 FNSWISQVIRIYKDREYAELEFTIGPIPT-----EDSVGKEVITKMTAN-MATDKVFYTDSNGRDFLKRVRDYRADWDLQVTQPVAGNYYPVNLGMYITDNKSE----------------LSVLVDRATGGASIKDGEIELMLHRRLINDDARGVGEALDEPVCVGST--------------C-----------EGLTVRGNYYLGIHKNGDGSRWRRTTGQEIYSPLILAFGHE 875          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A3Q7F7P0_SOLLC (Alpha-mannosidase n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7F7P0_SOLLC)

HSP 1 Score: 176 bits (447), Expect = 6.890e-47
Identity = 97/235 (41.28%), Postives = 135/235 (57.45%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEE 711
            F+SW++Q IR+ + + HAEL++++GPIP        + GKEVI++ +A+ +A+D VFYTD+NGR+F +RVR++R  WDL VTQPVAGNYYPV    ++ D + +                LSVL DRA G +S  DGE+ELM HRRL+ +D RGVGEAL+E     S               C           +G   RG +YL + +  DG R  RT   E++SP + AF  E
Sbjct:  695 FNSWISQVIRIYKDKEHAELEFTIGPIPT-----EDSVGKEVITKITAN-MATDKVFYTDSNGRDFLKRVRNYRADWDLQVTQPVAGNYYPVNLGMYITDNKSE----------------LSVLVDRATGGASIKDGEIELMLHRRLINDDGRGVGEALDEPVCVGST--------------C-----------EGLTVRGNYYLGIHKNSDGSRWRRTTGQEIYSPLILAFAHE 882          
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7K8ER88_LEURO (MA2B1 mannosidase (Fragment) n=1 Tax=Leucopsar rothschildi TaxID=127929 RepID=A0A7K8ER88_LEURO)

HSP 1 Score: 165 bits (418), Expect = 3.320e-46
Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNE 489
            FS+W +Q +RLR G+ + EL+W+VGPIPVG G      GKEVISRF    L + G+FYTD+NGR+   R RD+RPTW+L+ ++PVAGNYYPV    F++D+                K  L+VLTDR+QG SS  DG LELM HRRLL +D+RG+GEAL+E
Sbjct:   84 FSAWCSQVLRLRPGQPYLELEWTVGPIPVGDG-----LGKEVISRFQTP-LRTAGLFYTDSNGRQVLERRRDYRPTWNLSQSEPVAGNYYPVNTRIFIRDQ----------------KVQLTVLTDRSQGGSSILDGSLELMVHRRLLNDDKRGLGEALDE 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L421_9PHAE1.340e-9363.46Alpha-mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
D7FJT1_ECTSI6.010e-8964.52Alpha-mannosidase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S3H3R4_9STRA1.850e-5944.67Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4N8T3_9STRA1.120e-5043.30Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A388L3Z6_CHABU1.480e-4946.55Alpha-mannosidase n=1 Tax=Chara braunii TaxID=6933... [more]
A0A7S2WUY8_9STRA5.210e-4945.61Alpha-mannosidase n=1 Tax=Rhizochromulina marina T... [more]
A0A7K6TCP9_CALNI4.250e-4854.04MA2B1 mannosidase (Fragment) n=1 Tax=Caloenas nico... [more]
M0ZVS8_SOLTU2.690e-4741.70Alpha-mannosidase n=9 Tax=Solanaceae TaxID=4070 Re... [more]
A0A3Q7F7P0_SOLLC6.890e-4741.28Alpha-mannosidase n=6 Tax=Solanum TaxID=4107 RepID... [more]
A0A7K8ER88_LEURO3.320e-4652.80MA2B1 mannosidase (Fragment) n=1 Tax=Leucopsar rot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63495contigH-elongata_contig63495:497..2986 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue1.4e-77
Seed eggNOG ortholog2880.D7FJT1
KEGG koko:K01191,ko:K12311
KEGG ReactionR08717,R08718
KEGG Pathwayko00511,ko04142,map00511,map04142
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005774,GO:0005775,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009100,GO:0009311,GO:0009313,GO:0009505,GO:0009987,GO:0012505,GO:0015923,GO:0016020,GO:0016052,GO:0016192,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0030141,GO:0030312,GO:0031090,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036211,GO:0036230,GO:0042119,GO:0042582,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048046,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:1901135,GO:1901564,GO:1901575
EggNOG free text desc.mannose metabolic process
EggNOG OGsKOG1959@1,KOG1959@2759
EC3.2.1.24
COG Functional cat.G
CAZyGH38
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha-mannosidase, family GH38
Ec32 orthologEc-06_010280.2
Exons5
Model size744
Cds size744
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63495.13927.1prot_H-elongata_contig63495.13927.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig63495 497..2986 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931018.3471096-CDS-H-elongata_contig63495:496..5651622931018.3471096-CDS-H-elongata_contig63495:496..565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 497..565 -
1691679664.1963565-CDS-H-elongata_contig63495:496..5651691679664.1963565-CDS-H-elongata_contig63495:496..565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 497..565 -
1622931018.3682303-CDS-H-elongata_contig63495:1257..13791622931018.3682303-CDS-H-elongata_contig63495:1257..1379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1258..1379 -
1691679664.20612-CDS-H-elongata_contig63495:1257..13791691679664.20612-CDS-H-elongata_contig63495:1257..1379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1258..1379 -
1622931018.3848133-CDS-H-elongata_contig63495:1573..16271622931018.3848133-CDS-H-elongata_contig63495:1573..1627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1574..1627 -
1691679664.215962-CDS-H-elongata_contig63495:1573..16271691679664.215962-CDS-H-elongata_contig63495:1573..1627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1574..1627 -
1622931018.401284-CDS-H-elongata_contig63495:1951..20841622931018.401284-CDS-H-elongata_contig63495:1951..2084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1952..2084 -
1691679664.2236607-CDS-H-elongata_contig63495:1951..20841691679664.2236607-CDS-H-elongata_contig63495:1951..2084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 1952..2084 -
1622931018.4183116-CDS-H-elongata_contig63495:2620..29861622931018.4183116-CDS-H-elongata_contig63495:2620..2986Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 2621..2986 -
1691679664.231393-CDS-H-elongata_contig63495:2620..29861691679664.231393-CDS-H-elongata_contig63495:2620..2986Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63495 2621..2986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig63495.13927.1

>prot_H-elongata_contig63495.13927.1 ID=prot_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSA
SSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFV
KDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLL
TEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEV
FRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGSTHSPPPP
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mRNA from alignment at H-elongata_contig63495:497..2986-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig63495.13927.1 ID=mRNA_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2490bp|location=Sequence derived from alignment at H-elongata_contig63495:497..2986- (Himanthalia elongata Himel1 dioecious)
AAGGTGTTCTCAAGCTGGGTGACGCAGACAATTAGGTTGCGCCGAGGGGA GTACCACGCTGAATTGGACTGGTCAGTTGGCCCCATCCCCGTGGGAGGTG GTGACATCTCCGGTGCCGCGGGGAAGGAAGTCATCTCGCGGTTTTCCGCG TCGTCTTTGGCCTCGGACGGCGTGTTCTACACGGACGCCAACGGAAGGGA GTTCCAGAGGCGTGTGCGAGACTGGCGGCCGACGTGGGACCTCAACGTGA CGCAGCCCGTGGCGGGGAACTACTACCCTGTGACGGCCGCGGCGTTCGTG AAGGACGAGAGGATGGACGGGAAAGGGGGCGGCGATGGTCTGCAGGCGAG CTCCTTAAAATATACTGTACATATATGAATATATACAGTATATATATACC GGTATAATATTAAAGCATATTTTAGTTTTTGGCATTTTCCTAAGGGTCGG AGCATGGACGGGCGCGGGGCATTGAAATAAAGTTGCTTGCATAACTTGTT TTCATCGCAAGAAAGCGCAGAATTGCACAGGTCGTCGAGTTCCGCTGTTC TGGGGAGTCACTAGCGCCGAGCAGGGCATCCGAACAACCTTTTTCCCTTC TCTATTTTCCCTATCCCACGAGAGAGGAAAATAGGGGCTACAATAGTGAT GAGGGGCTACAATAGTGATGAGGGGCTACAAAAGTGATGAGGGGCTACAA GAGTGATGAGGGGCTACAAGAGTGATGAGGGGCTACAAGAGTGATGAGGG GCTACAACAGTGATAAGGGGCTACAAGAGTGATGAGGGGGGCCTGATTGA CACCAAGAGCCCTATTTTTTTTCGGCACTCGATCGATCGATCGATCAGGG CTTATTCCAATTTGCCTGCTCTTTATATATTTCTCTCTCTCTCAACCTAC AGCTTTCTGTGTTGACAGACCGGGCGCAGGGATGTTCGTCCTTCGCCGAT GGGGAGCTCGAGCTGATGGCGCACAGAAGGCTGCTCACGGAAGACCAGAG AGGCGTTGGTGAAGCGCTCAACGAAACTACCGGTGGTGAGGGACAAATGG ATTACATTGCTTCTGAAGGCGGCGGAGAGGGGGGGACAAAGGGATCATAC GTTTCCCGCGCATGTTGAGAAGGAATTACATTACCGGTACTGTGCCCGTG TTTTTTATATCATTTTCTCACTTTTAGCGTCGAGACTATTACGGGGCTAT GACGGGACTATGACGGGACAAGGATGGGATCAGGGAATACGAAGTAGGTG TGTTGCTGAGACGTTTCGCTTTGTGTCTCGCGCGAAGAACGGAGACATAC GCTCGGCATCAATCGACGGGCTAGCCGAACTATCCTTCCTTTTGTTTGGA TCAGTATAGCCGCCTCGGCCAACCCTCCCTCTGGTGATCGTGATCACACC TTGCCTTTTCCCTGTTTTGTAGCTTGACGCCCCTTTGTACCATGGTCATG TTATACTAGCCGGACACGCGCGTGTTCTGTTCTGTTTGCTGCGCACGGTG TCATTTCCTTTGCGCGACTGTTCTGTTTTAAAGTGAGGGCTAGATTGACT TGGTTCGTTGTTTATTTTGCGCTCTCTGATTGGGTCGACCCTTCCGTTAA TCAAAAGGCATGAGTCACTACCCGGATTGGAAACGTGAGGGCGACGGGGA GGTTTTCCGCGGCACGCACTACCTATTTGTCTCGAGGAAGAAGGACGGGA TGAGGGACGTGCGTACGCTAATGGACGAGGTGATGATTCGTGATTGATGA TTCGTGCTGTCGGTTATCGGTGACTGGTGATTGATGATTCAAGATTATGA GTGGGGATCGAATTGGTGATGTGGTGTGGATCGGCGATTGATTTTTGGTG ATTTGGTCTTTGATGATAAATGAACGTTGATCGAGGAACGCTGATTGAGG ATCCCTCTTGCGAACACAAAACTGAACTCTTCGTATCTAACCTTGAATGT CGAACTCACTCACGCGTATTCCCCCTTTCCCCTCAGTTTTTGGTGGTATA TTTGACGTAAAGTCCTATAGTATTAGTACTATTAGTACTATTAATACTAT TAGTAGTATTAATACTATTAATACTATTAGTACTATTAATACTATTTTCT GTTTAAAGGCATCATATATTTTATTAATGGATCTGGTAAAAACATGGCCC AAACTTCGAACTACAAACGACTCTCATGTTTTGTATTTGCACTAGTGAAC TAACCGCTGAATATACATGACGAGGAATATTCTTGAGGTTAGTTCACTAT TGTGTAGTGTTTGGTTAGACTGTGTCAAACTGAAGGGAGGGGTATCGCCG CCGTCGCTTGTTGGCTGGGGGAGGCGTCGTGCCGACGAATATGACAAGGT GAAATAAGTTATGCTGATACAACACTTGTCTTGACGTGTGCTGCTCGCGG CCTACCTCTATCACCTCTCAGGTTTTTAGTCCATTCGTGCCGGCGTTCGG AGAAGAAGAGGACGGTAGCACACACTCCCCTCCGCCTCCT
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Coding sequence (CDS) from alignment at H-elongata_contig63495:497..2986-

>mRNA_H-elongata_contig63495.13927.1 ID=mRNA_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig63495:497..2986- (Himanthalia elongata Himel1 dioecious)
AAGGTGTTCTCAAGCTGGGTGACGCAGACAATTAGGTTGCGCCGAGGGGA
GTACCACGCTGAATTGGACTGGTCAGTTGGCCCCATCCCCGTGGGAGGTG
GTGACATCTCCGGTGCCGCGGGGAAGGAAGTCATCTCGCGGTTTTCCGCG
TCGTCTTTGGCCTCGGACGGCGTGTTCTACACGGACGCCAACGGAAGGGA
GTTCCAGAGGCGTGTGCGAGACTGGCGGCCGACGTGGGACCTCAACGTGA
CGCAGCCCGTGGCGGGGAACTACTACCCTGTGACGGCCGCGGCGTTCGTG
AAGGACGAGAGGATGGACGGGAAAGGGGGCGGCGATGGTCTGCAGGCGAG
CTCCTTAAAATATACTAAGGTGTTCTCAAGCTGGGTGACGCAGACAATTA
GGTTGCGCCGAGGGGAGTACCACGCTGAATTGGACTGGTCAGTTGGCCCC
ATCCCCGTGGGAGGTGGTGACATCTCCGGTGCCGCGGGGAAGGAAGTCAT
CTCGCGGTTTTCCGCGTCGTCTTTGGCCTCGGACGGCGTGTTCTACACGG
ACGCCAACGGAAGGGAGTTCCAGAGGCGTGTGCGAGACTGGCGGCCGACG
TGGGACCTCAACGTGACGCAGCCCGTGGCGGGGAACTACTACCCTGTGAC
GGCCGCGGCGTTCGTGAAGGACGAGAGGATGGACGGGAAAGGGGGCGGCG
ATGGTCTGCAGGCGAGCTCCTTAAAATATACTCTTTCTGTGTTGACAGAC
CGGGCGCAGGGATGTTCGTCCTTCGCCGATGGGGAGCTCGAGCTGATGGC
GCACAGAAGGCTGCTCACGGAAGACCAGAGAGGCGTTGGTGAAGCGCTCA
ACGAAACTACCGGTGCTTTCTGTGTTGACAGACCGGGCGCAGGGATGTTC
GTCCTTCGCCGATGGGGAGCTCGAGCTGATGGCGCACAGAAGGCTGCTCA
CGGAAGACCAGAGAGGCGTTGGTGAAGCGCTCAACGAAACTACCGGTGCC
GCCTCGGCCAACCCTCCCTCTGGTGATCGTGATCACACCTTGCCTTTTCC
CTCCGCCTCGGCCAACCCTCCCTCTGGTGATCGTGATCACACCTTGCCTT
TTCCCTGCATGAGTCACTACCCGGATTGGAAACGTGAGGGCGACGGGGAG
GTTTTCCGCGGCACGCACTACCTATTTGTCTCGAGGAAGAAGGACGGGAT
GAGGGACGTGCGTACGCTAATGGACGAGGCATGAGTCACTACCCGGATTG
GAAACGTGAGGGCGACGGGGAGGTTTTCCGCGGCACGCACTACCTATTTG
TCTCGAGGAAGAAGGACGGGATGAGGGACGTGCGTACGCTAATGGACGAG
GTTTTTAGTCCATTCGTGCCGGCGTTCGGAGAAGAAGAGGACGGTAGCAC
ACACTCCCCTCCGCCTCCTGTTTTTAGTCCATTCGTGCCGGCGTTCGGAG
AAGAAGAGGACGGTAGCACACACTCCCCTCCGCCTCCT
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