mRNA_H-elongata_contig63495.13927.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A6H5L421_9PHAE (Alpha-mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L421_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.340e-93 Identity = 165/260 (63.46%), Postives = 190/260 (73.08%), Query Frame = 1
Query: 1 KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDIS---------GAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDE---VFSPFVPAFGEEEDGSTHSPPPP 744
+VFS WVTQT+RLRRG+ +AE+DW+VGP+PVG S AAGKEVISRF A SLAS G FYTD+NGREFQRRVR+ RPTWDL+VTQPVAGNYYP T A F++DE DG G D +Q LSVLTDRAQG SS ADGELELMAHRRLLT+DQRGVGEALNETTG M+H+PDWKREGDG+VFRGTHYL +S+K+DGM+ VR+LMDE VFSPF+PAFG+E + P PP
Sbjct: 868 QVFSDWVTQTVRLRRGQAYAEVDWAVGPVPVGSSSSSPPSSDSATGXAAGKEVISRFWAPSLASKGTFYTDSNGREFQRRVRNERPTWDLDVTQPVAGNYYPATTAVFLRDEGDDG-GDEDEMQ-------LSVLTDRAQGVSSLADGELELMAHRRLLTDDQRGVGEALNETTGG------------------MTHFPDWKREGDGQVFRGTHYLVISKKRDGMKAVRSLMDEARQVFSPFLPAFGDEAGRADGYPLPP 1101
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: D7FJT1_ECTSI (Alpha-mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT1_ECTSI) HSP 1 Score: 296 bits (757), Expect = 6.010e-89 Identity = 160/248 (64.52%), Postives = 179/248 (72.18%), Query Frame = 1
Query: 1 KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGSTHSPPPP 744
+VFS WVTQTIRLRRG AAGKEVISRF A SLAS G FYTD+NGREFQRRVR+ RPTWDL+VTQPVAGNYYP TAA F++DE D +G D +Q LSVLTDRA+G SS ADGELELMAHRRLLT+DQRGVGEALNETTGA A PS +P MSH+PDWKREGDG+VFRGTHYL +S+K DGM+ VR+LMDEVFSPF+PAFG E + P PP
Sbjct: 851 QVFSDWVTQTIRLRRG----------------------AAGKEVISRFWAPSLASKGTFYTDSNGREFQRRVRNERPTWDLDVTQPVAGNYYPATAAVFLRDEEGDDEGDEDAMQ-------LSVLTDRAEGVSSLADGELELMAHRRLLTDDQRGVGEALNETTGAILATVPSVPLGPLMPE-GMSHFPDWKREGDGQVFRGTHYLVISKKGDGMKAVRSLMDEVFSPFLPAFGHEVGRADGYPLPP 1068
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S3H3R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3R4_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.850e-59 Identity = 109/244 (44.67%), Postives = 145/244 (59.43%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASD---GVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGSTH 729
FS + +Q +R+R G EL+W+VGP+P+ G GKEVIS+F+++ + +TD+NGREF RV ++RPTWDL V +P+AGNYYP+TAA +++D D L+VLTDR+QG +S GE+EL+ HRRL+ +D RGV EALNETTG MSHYPDW R GDG G HYL +S DG+++VRTLMDE++ P VP F E H
Sbjct: 371 FSDYASQVVRVRDGSPVVELEWTVGPVPINDG-----IGKEVISKFTSNLRTGEKGRSKCFTDSNGREFMERVFNYRPTWDLEVYEPIAGNYYPLTAAMYIQDTTHD--------------QQLAVLTDRSQGGASLKSGEMELLIHRRLVVDDNRGVEEALNETTGG------------------MSHYPDWIRSGDGITVTGKHYLLLSSVSDGLKEVRTLMDELYLPLVPLFSAEPSTVKH 577
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S4N8T3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8T3_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.120e-50 Identity = 97/224 (43.30%), Postives = 133/224 (59.38%), Query Frame = 1
Query: 16 WVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSP 687
W+ Q RLR+G+ + E++++VGPIP+ G GKE+++R+ S + S GV YTD+NGREF +R R +RPTW+L +PVAGNYYPV AAA+V+DE +S+ +VL DR+QG +S +DG +ELM RR+L +D RGVGE LNET G + PP GD R G+G V +G H + V G R R+LMD +SP
Sbjct: 84 WMKQITRLRKGQPYVEVEYTVGPIPIDDG-----VGKEIVARYD-SGIQSRGVLYTDSNGREFVQRKRGYRPTWELKEYEPVAGNYYPVNAAAYVEDEXXXXXXXXXXXHRASM----AVLVDRSQGGASLSDGSIELMIQRRVLADDGRGVGEPLNETVGGVTPYPPYGDA---------------SRRGEGIVVKGVHRILVGEGGSGARLARSLMDRTWSP 282
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A388L3Z6_CHABU (Alpha-mannosidase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L3Z6_CHABU) HSP 1 Score: 184 bits (467), Expect = 1.480e-49 Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAF 702
FS W +Q IR+ +G+ HAE++++VGPIP+G G GKEVI+RFS S LAS G FYTD+NGR+ +R ++RPTWDLNVT+PVAGNYYPV AA ++ +E D S+LTDRA G +S DGELELM HRRLL +DQRGVGE LNET A C G V RG YL +++ R RT V+SP +PAF
Sbjct: 728 FSDWASQVIRIYKGKEHAEVEYTVGPIPIGDG-----LGKEVITRFS-SDLASYGTFYTDSNGRDMLKRKINYRPTWDLNVTEPVAGNYYPVGAAIYLGNESSD----------------FSILTDRALGGASLHDGELELMLHRRLLVDDQRGVGECLNETVCAGGV--------------CQ-----------GLVVRGKLYLNLNQSVAAARWRRTEAQNVYSPLLPAF 912
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7S2WUY8_9STRA (Alpha-mannosidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUY8_9STRA) HSP 1 Score: 182 bits (463), Expect = 5.210e-49 Identity = 109/239 (45.61%), Postives = 135/239 (56.49%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEEEDGS 723
FSSW+ QTIRL G EL+W+VG +P I GKEV+SRFS SS+AS F TD+NGREF R R RP+WD + +P+AGNYYPV +V+DE L+VLTDR+QG SS A GE+ELM HRR L +D RGVGE LNET+ S D D C + REG V RGTHYL +++ + +R +R EVFSP V AF G+
Sbjct: 759 FSSWLNQTIRLFPGSDTVELEWTVGEVP-----IEDQLGKEVVSRFS-SSVASGDAFSTDSNGREFLERRRGLRPSWDATIREPIAGNYYPVNMGIYVQDEEAQ----------------LTVLTDRSQGGSSLASGEVELMVHRRTLLDDSRGVGEPLNETSFITSY----ADTD------CAAC-----REGHALVARGTHYLQLAQPRQALRQLREKAQEVFSPVVTAFSSAGAGA 960
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7K6TCP9_CALNI (MA2B1 mannosidase (Fragment) n=1 Tax=Caloenas nicobarica TaxID=187106 RepID=A0A7K6TCP9_CALNI) HSP 1 Score: 170 bits (430), Expect = 4.250e-48 Identity = 87/161 (54.04%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNE 489
FSSW +Q +RLR G+ + EL+W+VGPIPVG G GKE+ISRF L +DG FYTD+NGR+ R RD+RPTW+LN T+PVAGNYYPV F+KD+++ L+VLTDR+QG SS DG +ELM HRRLL +D RGVGE L+E
Sbjct: 58 FSSWCSQVLRLRAGQRYLELEWTVGPIPVGDG-----WGKEIISRFETP-LRTDGRFYTDSNGRQILERRRDYRPTWNLNQTEPVAGNYYPVNTRIFIKDQKLQ----------------LTVLTDRSQGGSSVTDGSVELMVHRRLLQDDSRGVGEPLDE 196
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: M0ZVS8_SOLTU (Alpha-mannosidase n=9 Tax=Solanaceae TaxID=4070 RepID=M0ZVS8_SOLTU) HSP 1 Score: 177 bits (450), Expect = 2.690e-47 Identity = 98/235 (41.70%), Postives = 135/235 (57.45%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEE 711
F+SW++Q IR+ + +AEL++++GPIP + GKEVI++ +A+ +A+D VFYTD+NGR+F +RVRD+R WDL VTQPVAGNYYPV ++ D + + LSVL DRA G +S DGE+ELM HRRL+ +D RGVGEAL+E S C +G RG +YL + + DG R RT E++SP + AFG E
Sbjct: 688 FNSWISQVIRIYKDREYAELEFTIGPIPT-----EDSVGKEVITKMTAN-MATDKVFYTDSNGRDFLKRVRDYRADWDLQVTQPVAGNYYPVNLGMYITDNKSE----------------LSVLVDRATGGASIKDGEIELMLHRRLINDDARGVGEALDEPVCVGST--------------C-----------EGLTVRGNYYLGIHKNGDGSRWRRTTGQEIYSPLILAFGHE 875
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A3Q7F7P0_SOLLC (Alpha-mannosidase n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7F7P0_SOLLC) HSP 1 Score: 176 bits (447), Expect = 6.890e-47 Identity = 97/235 (41.28%), Postives = 135/235 (57.45%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNETTGAASANPPSGDRDHTLPFPCMSHYPDWKREGDGEVFRGTHYLFVSRKKDGMRDVRTLMDEVFSPFVPAFGEE 711
F+SW++Q IR+ + + HAEL++++GPIP + GKEVI++ +A+ +A+D VFYTD+NGR+F +RVR++R WDL VTQPVAGNYYPV ++ D + + LSVL DRA G +S DGE+ELM HRRL+ +D RGVGEAL+E S C +G RG +YL + + DG R RT E++SP + AF E
Sbjct: 695 FNSWISQVIRIYKDKEHAELEFTIGPIPT-----EDSVGKEVITKITAN-MATDKVFYTDSNGRDFLKRVRNYRADWDLQVTQPVAGNYYPVNLGMYITDNKSE----------------LSVLVDRATGGASIKDGEIELMLHRRLINDDGRGVGEALDEPVCVGST--------------C-----------EGLTVRGNYYLGIHKNSDGSRWRRTTGQEIYSPLILAFAHE 882
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Match: A0A7K8ER88_LEURO (MA2B1 mannosidase (Fragment) n=1 Tax=Leucopsar rothschildi TaxID=127929 RepID=A0A7K8ER88_LEURO) HSP 1 Score: 165 bits (418), Expect = 3.320e-46 Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 1
Query: 7 FSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSASSLASDGVFYTDANGREFQRRVRDWRPTWDLNVTQPVAGNYYPVTAAAFVKDERMDGKGGGDGLQASSLKYTLSVLTDRAQGCSSFADGELELMAHRRLLTEDQRGVGEALNE 489
FS+W +Q +RLR G+ + EL+W+VGPIPVG G GKEVISRF L + G+FYTD+NGR+ R RD+RPTW+L+ ++PVAGNYYPV F++D+ K L+VLTDR+QG SS DG LELM HRRLL +D+RG+GEAL+E
Sbjct: 84 FSAWCSQVLRLRPGQPYLELEWTVGPIPVGDG-----LGKEVISRFQTP-LRTAGLFYTDSNGRQVLERRRDYRPTWNLSQSEPVAGNYYPVNTRIFIRDQ----------------KVQLTVLTDRSQGGSSILDGSLELMVHRRLLNDDKRGLGEALDE 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63495.13927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63495.13927.1 >prot_H-elongata_contig63495.13927.1 ID=prot_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp KVFSSWVTQTIRLRRGEYHAELDWSVGPIPVGGGDISGAAGKEVISRFSAback to top mRNA from alignment at H-elongata_contig63495:497..2986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63495.13927.1 ID=mRNA_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2490bp|location=Sequence derived from alignment at H-elongata_contig63495:497..2986- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63495:497..2986- >mRNA_H-elongata_contig63495.13927.1 ID=mRNA_H-elongata_contig63495.13927.1|Name=mRNA_H-elongata_contig63495.13927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig63495:497..2986- (Himanthalia elongata Himel1 dioecious)back to top |