mRNA_H-elongata_contig63342.13913.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: D7FXC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC3_ECTSI) HSP 1 Score: 316 bits (810), Expect = 4.050e-100 Identity = 170/231 (73.59%), Postives = 184/231 (79.65%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNMQ 693
KLGEW+ATAI GNDILSSVLYV+GLVTG A WLSP+CL MVAGIL+LYRFIYGEAISALPMNGGAYNVLIN TSKPVASFAACLA+ISYIATGVVSAATAV T+GISESAG AL MFVVHV TLTAVC+ SA YAF+N + +++NLQQ FP V VG + +EGTW TAILFG SSAMLGVSGFESSSQFVEEQ KGVFVKTLRNMQ
Sbjct: 176 KLGEWYATAISGNDILSSVLYVTGLVTGFAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVASFAACLAVISYIATGVVSAATAVSYLQTLIPAAGLMTCTIGLLFFFACLMTMGISESAGVALGMFVVHVFTLTAVCVLSACYAFYNVTILKENLQQDFPAVTVGGTVVEGTWVTAILFGVSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQ 406
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A836CNH3_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH3_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.670e-80 Identity = 139/213 (65.26%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQ 639
KLGEW ATAICGNDILSSVLYVSGLVT SA WLSP+CL MVAG+L+LYRFIYGEAISALPMNGG+YNVLIN TSK +ASFAACLAIISYIATGVVSAATA+ GISES+ AL MFV+HV TL A+ + +A YA F +T +N+Q+ FPD++VG + ++G W TA+LFGFSSAMLGVSGFESSSQ
Sbjct: 99 KLGEWAATAICGNDILSSVLYVSGLVTSSAGWLSPVCLLMVAGLLYLYRFIYGEAISALPMNGGSYNVLINTTSKAIASFAACLAIISYIATGVVSAATAIAYLRTLWPELDAQLATVALLFFFACLMGYGISESSDVALGMFVLHVATLFALAVGAAAYACFETTTFHENIQRDFPDIIVGGNLVQGNWATALLFGFSSAMLGVSGFESSSQ 311
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A835YT58_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT58_9STRA) HSP 1 Score: 238 bits (608), Expect = 3.650e-71 Identity = 123/229 (53.71%), Postives = 163/229 (71.18%), Query Frame = 1
Query: 4 LGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
LGEW +TAIC NDILSSV+Y SGLV+ +A L+P+CL +VAG+LHL++ IY EAISALP NGG+YNVL+NATSK VA+ AAC+ ++SY+ TGVVSAA+A+ G+SESA A+ +F +HV TLTAVC+ S+VY FN++T+ N++ G+PDV++ + GT++TA+ FG S+A LGVSGFE+S+QFVEEQ GVF KTL NM
Sbjct: 77 LGEWMSTAICANDILSSVIYTSGLVSATAGVLAPVCLFIVAGVLHLFKSIYCEAISALPSNGGSYNVLLNATSKSVAALAACVTVLSYVTTGVVSAASAIAYLHVVFPQVHLVYGTVLLLLFFACLTAFGVSESARVAVGIFALHVLTLTAVCLLSSVYVAFNSATLHANIEAGYPDVILAGGRVRGTFWTALFFGVSTAFLGVSGFETSAQFVEEQVAGVFPKTLSNM 305
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: H3GCK0_PHYRM (Uncharacterized protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3GCK0_PHYRM) HSP 1 Score: 233 bits (593), Expect = 6.070e-69 Identity = 127/231 (54.98%), Postives = 157/231 (67.97%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNA-STIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSGLV A L+P+ LA+VAGIL+LYRFIYGE ++A+P+NGG+YNVL+N TSK +A+ AA LAI+SYIATGVVS +A IGI+ESA AL++F+ H TLT +C+ SAVY + T+Q N GFPD+ + + G + TAI FG S+AMLG+SGFE+SSQFVEEQ +GVF KTLRNM
Sbjct: 78 KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRLAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATIGLLFIFAMLSLIGITESAVVALVIFITHAATLTVLCVLSAVYVVKDEFQTLQANFDTGFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQAEGVFPKTLRNM 308
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A5D6XZE1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZE1_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.990e-68 Identity = 128/231 (55.41%), Postives = 154/231 (66.67%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTI-QDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSGLV A +L+P+ LA+VAG+L+LYRFIYGE + A+P+NGG+YNVL+N T+K VAS AA LAI+SYIATGVVS +A IGI+ESA AL +F+ H TL +C+ SAV+ F N I DN FPD+ + T+ G FTA+ FG S+AMLG+SGFESSSQFVEEQ GVF KTLRNM
Sbjct: 78 KLSEWLATAICGNDILSSCLYVSGLVASKAGFLAPLALAIVAGVLYLYRFIYGEVVGAIPLNGGSYNVLLNTTTKRVASVAASLAILSYIATGVVSGTSACNYLASQIPGLPIVPATIGLLFFFAVLSLIGITESALLALAIFIAHSITLLVLCVFSAVFVFQNGFAILHDNFATDFPDINLAGDTVGGNLFTALFFGTSTAMLGISGFESSSQFVEEQADGVFPKTLRNM 308
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A1V9YA40_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA40_9STRA) HSP 1 Score: 230 bits (587), Expect = 4.270e-68 Identity = 132/232 (56.90%), Postives = 160/232 (68.97%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVY-AFFNASTIQDNL-QQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSGLVT A L+P+ LA+VAGIL+LYRFIYGE ++A+PMNGG+YNVL+N TSK VAS AA LAI+SYIATGVVS +A ++GISESA AL +F++H TL A+C+AS ++ + N S + DNL FPDV V S + G FTA+ FG S+AMLG+SGFESSSQFV+EQ GVF KTL+NM
Sbjct: 77 KLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSVGLLFFFAVLTSMGISESAMFALGIFILHTLTLIALCVASIIFMSQNNFSILYDNLFHTDFPDVNVAGSWVSGDIFTALFFGTSTAMLGISGFESSSQFVQEQAAGVFPKTLKNM 308
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A6A3ZJ44_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3ZJ44_9STRA) HSP 1 Score: 230 bits (587), Expect = 7.410e-68 Identity = 127/231 (54.98%), Postives = 156/231 (67.53%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNA-STIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSGLV A L+P+ LA+VAGIL+LYRFIYGE ++A+P+NGG+YNVL+N TSK VA+ AA LAI+SYIATGVVS +A IGI+ESA AL++FV H TLT +C+ SAVY + + T+ N FPD+ + + G + TAI FG S+AMLG+SGFE+SSQFVEEQ +GVF KTLRNM
Sbjct: 77 KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPLALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATIGLLFIFAALSLIGITESAVVALVIFVAHAATLTVLCVLSAVYVWNDGFQTLHANFSTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQAEGVFPKTLRNM 307
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: K3WJT8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJT8_GLOUD) HSP 1 Score: 229 bits (585), Expect = 9.470e-68 Identity = 127/231 (54.98%), Postives = 155/231 (67.10%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTI-QDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSG+V A +L+P+ LA+VAG+L+LYRFIYGE ++A+P+NGG+YNVL+N T+K VAS AA LAI+SYIATGVVS +A IGI+ESA AL +F+ H TL +C+ SA++ F N I + N FPD+ + TI G FTAI FG S+AMLG+SGFESSSQFVEEQ GVF KTLRNM
Sbjct: 73 KLSEWLATAICGNDILSSCLYVSGIVASKAGFLAPVALAIVAGVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTTKRVASVAASLAILSYIATGVVSGTSACNYLASQLPTLPIVPATIGLLFFFAVLSLIGITESALVALAIFIAHSITLAVLCVFSAIFVFKNDFEILKANFSTDFPDINLAGDTITGNLFTAIFFGTSTAMLGISGFESSSQFVEEQADGVFPKTLRNM 303
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: K8YV13_NANGC (Amino acid-polyamine-organocation family (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV13_NANGC) HSP 1 Score: 221 bits (562), Expect = 2.710e-67 Identity = 118/230 (51.30%), Postives = 158/230 (68.70%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVYAFFNASTIQDNLQQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL +W ATAICGNDI++S YV GLVT SA ++P+ L +V+ +L+L RF+Y EAI+ALPMNGG++NVL+N+TSK +AS AA LA++SYIATGVVSA +AV +GI ESAG A ++F +H+ TLT +C S VY + ST+++N + +PDV +G G++ TAI FG++SA+LGVSGFESSSQFV+ Q GVF+KTLRNM
Sbjct: 109 KLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHILTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNM 338
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Match: A0A1V9YY08_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY08_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.000e-66 Identity = 128/232 (55.17%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 1 KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAIISYIATGVVSAATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGISESAGAALIMFVVHVCTLTAVCIASAVY-AFFNASTIQDNL-QQGFPDVMVGDSTIEGTWFTAILFGFSSAMLGVSGFESSSQFVEEQRKGVFVKTLRNM 690
KL EW ATAICGNDILSS LYVSGLVT A L+P+ L +VAGIL+LYRFIYGE ++A+PMNGG+YNVL+N TSK VAS AA LAI+SYIATGVVS +A +GISESA AL++F++H TL +C+ S ++ A N S + +NL Q FP+V V + + G FTA+ FG S+AMLG+SGFESSSQFV+EQ GVF KTL+NM
Sbjct: 66 KLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPLDLVLVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSATVPTLSVVPASIGLLFFFAVLTCMGISESAMVALVIFIIHTLTLVVLCVMSVLFMAKNNFSILYENLFQTDFPEVNVAGTWVSGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNM 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63342.13913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63342.13913.1 >prot_H-elongata_contig63342.13913.1 ID=prot_H-elongata_contig63342.13913.1|Name=mRNA_H-elongata_contig63342.13913.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp KLGEWHATAICGNDILSSVLYVSGLVTGSASWLSPICLAMVAGILHLYRFback to top mRNA from alignment at H-elongata_contig63342:184..3155+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63342.13913.1 ID=mRNA_H-elongata_contig63342.13913.1|Name=mRNA_H-elongata_contig63342.13913.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2972bp|location=Sequence derived from alignment at H-elongata_contig63342:184..3155+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63342:184..3155+ >mRNA_H-elongata_contig63342.13913.1 ID=mRNA_H-elongata_contig63342.13913.1|Name=mRNA_H-elongata_contig63342.13913.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at H-elongata_contig63342:184..3155+ (Himanthalia elongata Himel1 dioecious)back to top |