mRNA_H-elongata_contig63260.13899.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 100 bits (249), Expect = 4.140e-23 Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGR-PNIALPASIVNNTELLSEVERVNQEQN 210
H +HAMAA SSSTRHAWYAKWQ HRVLRPEAYGG++HFV ++ LPASIV+NTELL+ VE +NQ QN
Sbjct: 355 HYIHAMAAGSSSTRHAWYAKWQVHRVLRPEAYGGLLHFVINNLIDDVPLPASIVSNTELLNAVESLNQAQN 425
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.660e-18 Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEV 186
HI+ ++AA+SSSTRHAWYAKWQ HRVLRPEAYGG+VH GR + LP +I+ NTELL+ V
Sbjct: 355 HILTSLAASSSSTRHAWYAKWQVHRVLRPEAYGGLVHNTLTGRLHTPLPKAILQNTELLNRV 416
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA) HSP 1 Score: 83.6 bits (205), Expect = 3.760e-17 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEVERVNQEQN 210
HI+ AM +ASSSTRHAWY KWQ HR+LRPEAYGG+VH LP SI+ NTELL+ VE NQ+ N
Sbjct: 389 HILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMN 458
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 3.760e-17 Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEVERVNQEQN 210
HI+ AMA+ASSSTRHAWYAKWQ HR+LRPEAYG +VH LP SI+ NTELL+ VE NQ N
Sbjct: 390 HILTAMASASSSTRHAWYAKWQVHRMLRPEAYGALVHNTLMRDVITPLPDSILRNTELLNRVEVHNQRMN 459
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 83.6 bits (205), Expect = 3.760e-17 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEVERVNQEQN 210
HI+ AM +ASSSTRHAWY KWQ HR+LRPEAYGG+VH LP SI+ NTELL+ VE NQ+ N
Sbjct: 400 HILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMN 469
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 8.030e-17 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEVERVNQEQN 210
HI+ AMA++SSSTRHAWY KWQ HRVLRPEAYGG++H LP SI+ NT+LLS VE N N
Sbjct: 139 HILAAMASSSSSTRHAWYTKWQVHRVLRPEAYGGLLHNTLMKDVITPLPQSILGNTDLLSRVEANNMRMN 208
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 2.160e-15 Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 1 HIVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTELLSEV 186
HI+ AMA++SSSTRHAWY KWQ HRVLRP+AYGG++H LP SI+ NT+LLS V
Sbjct: 356 HILAAMASSSSSTRHAWYTKWQVHRVLRPQAYGGLLHNTLMKDVITPLPQSILGNTDLLSRV 417
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: A0A7S4V9V9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V9V9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.010e-9 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 4 IVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTEL 174
++H +A S + H WY+KW HR LRPEA+GG+VH + G+ + L ASI N+ L
Sbjct: 220 MLHQLAHVSDAEAHPWYSKWNVHRFLRPEAFGGLVHLKKTGQRDYPLHASIFNSAVL 276
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: A0A7S4V1Y5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V1Y5_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.930e-8 Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 4 IVHAMAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNTEL 174
++H +A S + H WYAKW HR LRPEA+GG+VH + G+ + L SI ++ L
Sbjct: 18 MMHQLAHVSDAVAHPWYAKWNVHRFLRPEAFGGLVHLKKTGQRDYPLHDSIFDSNVL 74
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Match: A0A2V9DH74_9BACT (Phosphoesterase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9DH74_9BACT) HSP 1 Score: 49.7 bits (117), Expect = 3.230e-5 Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 1
Query: 25 ASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNN 165
A+ + + WY KW HR +RPE +GG+VHF R G + L I+N+
Sbjct: 332 ATRALKAVWYEKWFVHRTVRPEEFGGLVHFTRTGEASHPLHPDILNS 378 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63260.13899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63260.13899.1 >prot_H-elongata_contig63260.13899.1 ID=prot_H-elongata_contig63260.13899.1|Name=mRNA_H-elongata_contig63260.13899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp MAAASSSTRHAWYAKWQTHRVLRPEAYGGIVHFVREGRPNIALPASIVNNback to top mRNA from alignment at H-elongata_contig63260:617..1297+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63260.13899.1 ID=mRNA_H-elongata_contig63260.13899.1|Name=mRNA_H-elongata_contig63260.13899.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=681bp|location=Sequence derived from alignment at H-elongata_contig63260:617..1297+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63260:617..1297+ >mRNA_H-elongata_contig63260.13899.1 ID=mRNA_H-elongata_contig63260.13899.1|Name=mRNA_H-elongata_contig63260.13899.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig63260:617..1297+ (Himanthalia elongata Himel1 dioecious)back to top |