mRNA_H-elongata_contig6297.13874.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: D8LR35_ECTSI (Nad-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR35_ECTSI) HSP 1 Score: 471 bits (1211), Expect = 7.260e-160 Identity = 220/250 (88.00%), Postives = 233/250 (93.20%), Query Frame = 1
Query: 1 LGTNLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGNNYANSEVVVQSTDSLDRLSGK 750
+ +N+LEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKE DAWPAKPQDTYGLEKLYHEEMCKAYA DFPI+TR+ARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEG+IRIMEGDY LPLNLGTEEMVSMN+FA IAM FE K LPIRH+PGPEGVRGRNSDNTLIREKL WAPSV I EGLRKTYFWI+DQVE E A GTGNNY SEVVVQ+T+SL++LS K
Sbjct: 130 ISSNILEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEADAWPAKPQDTYGLEKLYHEEMCKAYAADFPIETRMARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGTIRIMEGDYRLPLNLGTEEMVSMNKFAAIAMGFEGKDLPIRHIPGPEGVRGRNSDNTLIREKLSWAPSVTIAEGLRKTYFWIKDQVEAEKAAGTGNNYDTSEVVVQTTESLEQLSHK 379
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A7S2C9X7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9X7_9STRA) HSP 1 Score: 403 bits (1035), Expect = 3.750e-133 Identity = 189/242 (78.10%), Postives = 207/242 (85.54%), Query Frame = 1
Query: 10 NLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTG-NNYANSEVVVQSTDSL 732
N+LEAAR N A RYFY+STACVYNED QLDPSNPGLKE AWPAKPQDTYGLEKLY EEM AYAKDF I TR+ARYHNVYGP GTWKGGREKAPAAFCRKAICST FEMWGDGEQTRSFMF+DDCVEGS+RIM DY LPLNLGTEEMVSMNEFA IAMS+E K LPI+H+PGP+GVRGRNSDNTLIREKL W+PS+ I +GL K YFWI+ Q + EAA G Y +S+VVVQ+T+SL
Sbjct: 117 NMLEAARTNGAARYFYSSTACVYNEDYQLDPSNPGLKESYAWPAKPQDTYGLEKLYAEEMALAYAKDFDIVTRVARYHNVYGPHGTWKGGREKAPAAFCRKAICSTDFFEMWGDGEQTRSFMFVDDCVEGSLRIMNSDYELPLNLGTEEMVSMNEFAAIAMSYESKTLPIKHIPGPQGVRGRNSDNTLIREKLGWSPSISIRDGLEKAYFWIKAQADAEAASGVDITQYGHSKVVVQTTESL 358
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A6U1M3G1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M3G1_9STRA) HSP 1 Score: 400 bits (1029), Expect = 1.370e-132 Identity = 187/248 (75.40%), Postives = 216/248 (87.10%), Query Frame = 1
Query: 10 NLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTG-NNYANSEVVVQSTDSLDRLSGK 750
N+LEAAR+N A+RYFY STACVYNED Q+DP+NPGLKE DAWPAKPQDTYGLEKLYHEEM KAYAKDFPI+TRIAR HNVYGP GTWKGGREKAPAAFCRKAI STK+FEMWGDG QTRSFMF+DDCVEG +RI D PLNLGTEEM+SM +FA IAMSFEDK LPI+H+ GP+GVRGRNSDNT+I+E+L WAPS+ I EGL+KTYFWI++QVE ++ KG + Y++S VV Q TDSL++L+GK
Sbjct: 115 NMLEAARMNNAERYFYTSTACVYNEDNQMDPNNPGLKEADAWPAKPQDTYGLEKLYHEEMAKAYAKDFPIKTRIARLHNVYGPMGTWKGGREKAPAAFCRKAITSTKEFEMWGDGLQTRSFMFVDDCVEGILRITFSDCDEPLNLGTEEMLSMIDFAKIAMSFEDKDLPIKHIEGPQGVRGRNSDNTMIKERLGWAPSISIAEGLKKTYFWIKEQVEKDSEKGIDPSTYSSSVVVTQVTDSLEQLAGK 362
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A7S2CJC0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJC0_9STRA) HSP 1 Score: 399 bits (1024), Expect = 2.640e-131 Identity = 183/246 (74.39%), Postives = 212/246 (86.18%), Query Frame = 1
Query: 1 LGTNLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGNN-YANSEVVVQSTDSLD 735
L N+LEA+R+N +RYFY+STACVYNED QLDP+NPGLKE DAWPAKPQDTYGLEKLY EEM AYA+DFPI TR+ARYHNVYGP GTWKGGREKAPAAFCRKAICST+ FEMWGDGEQTRSFMF+DDCVEGS++IM D +PLNLGTE+MVSMNEFA IAMS+E K LPI+H+PGP+GVRGRNSDNT+IREKL W P +PI +GL+K YFWI+ + + EAA G Y +S+VVVQST+SL+
Sbjct: 126 LSFNMLEASRMNGVQRYFYSSTACVYNEDKQLDPTNPGLKESDAWPAKPQDTYGLEKLYAEEMALAYARDFPITTRVARYHNVYGPHGTWKGGREKAPAAFCRKAICSTEFFEMWGDGEQTRSFMFVDDCVEGSLKIMHSDCEVPLNLGTEQMVSMNEFAAIAMSYESKTLPIKHIPGPQGVRGRNSDNTMIREKLGWEPLIPIEDGLKKAYFWIKSKCDEEAAAGQDITLYGHSKVVVQSTESLE 371
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A4D9CQJ4_9STRA (Epimerase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ4_9STRA) HSP 1 Score: 394 bits (1012), Expect = 7.040e-130 Identity = 183/251 (72.91%), Postives = 217/251 (86.45%), Query Frame = 1
Query: 1 LGTNLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYA-LPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGNNYANSEVVVQSTDSLDRLSGK 750
+ +N+LEAAR N A+RYFY+STACVYNEDLQLDPSNPGLKEGDAWPAKPQ+ YGLEKLYHEEM AY++DFP+ +RIAR+HNVYGP GTWKGGREKAPAAFCRKA+ ST+ FE+WGDGEQTRSFM++DDCVEG +RIM D A +PLNLGTE+MVSMN FA IAM FE KKLPI+H+PGP+GVRGRNSDNTLIRE L W P + I +GLR+TYFWI+ Q+E E A G +Y++S+VVVQ+T+SLD L+ K
Sbjct: 105 VSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQMVSMNSFAEIAMGFEGKKLPIKHIPGPQGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGMVFDYSSSKVVVQTTESLDALASK 355
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A6U4FV39_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FV39_9STRA) HSP 1 Score: 393 bits (1009), Expect = 1.930e-129 Identity = 182/248 (73.39%), Postives = 208/248 (83.87%), Query Frame = 1
Query: 1 LGTNLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTG-NNYANSEVVVQSTDSLDRL 741
L +N+LEAAR+ A+RYFY+STACVYNEDLQLDP+NPGL+EGDAWPAKPQD+YGLEKLYHE+M Y +DFP+ TRIAR+HNVYGP GTWKGGREKAPAAFCRKAICST+ FEMWGDGEQTRSFMFI+DCVEG +RIM GDY PLNLGTEEMVSMNEFA IAMSFE K L + H+PGP+GVRGRNS+N LIREKL WAP + I EGLRKTYFWI+ QV+ E +G Y S VV Q T +++L
Sbjct: 113 LSSNVLEAARMKGAERYFYSSTACVYNEDLQLDPTNPGLREGDAWPAKPQDSYGLEKLYHEQMALTYGEDFPLVTRIARFHNVYGPMGTWKGGREKAPAAFCRKAICSTEVFEMWGDGEQTRSFMFIEDCVEGCLRIMFGDYDKPLNLGTEEMVSMNEFADIAMSFEGKNLKVHHIPGPQGVRGRNSNNDLIREKLGWAPEIAIAEGLRKTYFWIKAQVDSEREEGVDVTQYGCSRVVQQDTSIIEKL 360
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A8J2X357_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X357_9STRA) HSP 1 Score: 382 bits (980), Expect = 3.660e-125 Identity = 174/251 (69.32%), Postives = 207/251 (82.47%), Query Frame = 1
Query: 10 NLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTG-NNYANSEVVVQSTDSLDRLSGKAAA 759
N+LEAAR KRYFY+S+ACVYN+DLQLDP NPGLKEGDAWPAKPQDTYGLEKLY EEM Y +DF I+ R AR+HNVYGPRGTWKGGREKAPAAFCRKA+C+T +FEMWGDG+QTRSFMFIDDCV+G +IM+ D PLNLG++EM+ MN+FA +A+SFE K LPI+H+PGPEGVRGRNSDN +I+EKL WAPS+P+ EGL+KTYFWI+ QVE + A G SE+VVQ+TD LD L+ + A
Sbjct: 115 NMLEAARCKGVKRYFYSSSACVYNDDLQLDPENPGLKEGDAWPAKPQDTYGLEKLYAEEMGIVYGRDFGIKFRCARFHNVYGPRGTWKGGREKAPAAFCRKAVCATTEFEMWGDGKQTRSFMFIDDCVQGIQKIMDSDCEQPLNLGSDEMIDMNDFAKLALSFEAKNLPIKHIPGPEGVRGRNSDNQMIKEKLGWAPSIPVAEGLKKTYFWIKAQVEKDKAAGLDITKLGTSEIVVQTTDDLDELAAQGLA 365
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: F0YA16_AURAN (Epimerase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA16_AURAN) HSP 1 Score: 377 bits (969), Expect = 1.890e-123 Identity = 173/249 (69.48%), Postives = 204/249 (81.93%), Query Frame = 1
Query: 10 NLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGN-NYANSEVVVQSTDSLDRLSGKA 753
N+LEAAR KRYFY+S+ACVYN+DLQLDP NPGLKE AWPAKPQDTYGLEKLY EEM Y +DF I+ R AR+HNVYGPRGTWKGGREKAPAAFCRKA+C+T +FEMWGDG+QTRSFMFIDDCVEG +IM+ D PLNLG++EM+ MN+FA +A+SFE K+LPI+H+PGPEGVRGRNSDNT+I+EKL WAPS+P+ GL+KTYFWI+D VE + A G SE+VVQ TD LD L+ A
Sbjct: 124 NVLEAARCKGVKRYFYSSSACVYNDDLQLDPDNPGLKEAGAWPAKPQDTYGLEKLYAEEMGIVYGRDFGIKFRCARFHNVYGPRGTWKGGREKAPAAFCRKAVCATSEFEMWGDGKQTRSFMFIDDCVEGIQKIMDSDCEQPLNLGSDEMIDMNDFAKLALSFESKELPIKHIPGPEGVRGRNSDNTMIKEKLGWAPSIPVAVGLKKTYFWIKDMVEKDKAAGIDTAKLGVSEIVVQKTDELDELAKNA 372
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A7S3Y641_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y641_HETAK) HSP 1 Score: 375 bits (962), Expect = 1.630e-122 Identity = 178/246 (72.36%), Postives = 206/246 (83.74%), Query Frame = 1
Query: 10 NLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKK-LPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGNN-YANSEVVVQSTDSLDRL 741
N+LEAAR+N A+RYFY+STACVYNED QLDP N GLKE AWPAKPQDTYGLEKLYHEEM K YAKDF ++ IARYHNVYGP GTWKGGREKAPAAFCRKAI ST DFEMWGDG+QTRSFMFIDDCVEGSIRIM + PLNLGTEEM+SMN+FA +A+ F K+ LPIRH+ GP+GVRGRNSDNT+IR++L WAPS+ I EGL KT+ WI ++E E A G + YA+S+VVVQ+TDSL+ +
Sbjct: 114 NVLEAARMNGAERYFYSSTACVYNEDYQLDPENTGLKEEYAWPAKPQDTYGLEKLYHEEMVKVYAKDFGLKIGIARYHNVYGPHGTWKGGREKAPAAFCRKAITSTTDFEMWGDGQQTRSFMFIDDCVEGSIRIMMSECEEPLNLGTEEMLSMNDFAKLALGFSGKEDLPIRHIEGPQGVRGRNSDNTMIRDRLGWAPSISIREGLEKTHAWINSKIEEEKASGVDVSVYASSQVVVQTTDSLEDM 359
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Match: A0A7S2KLP0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLP0_9STRA) HSP 1 Score: 361 bits (927), Expect = 4.630e-118 Identity = 167/247 (67.61%), Postives = 196/247 (79.35%), Query Frame = 1
Query: 1 LGTNLLEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEGDAWPAKPQDTYGLEKLYHEEMCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGSIRIMEGDYALPLNLGTEEMVSMNEFAGIAMSFEDKKLPIRHVPGPEGVRGRNSDNTLIREKLDWAPSVPIMEGLRKTYFWIRDQVEGEAAKGTGNNYANSEVVVQSTDSLDRL 741
+ N+LEAAR N+ K +FYAS+ACVYNE Q DP NPGL E DAWPA+PQD YGLEKLY EEM AY +DF I+ R+AR+HN+YGPRGTWKGGREKAPAAFCRKAI ST DFEMWGDG QTRSF FIDDCVEG +R+M D +P+NLGT EMV+M EFA IA+SFE+K LPIRHV GP GVRGRNS+N LI+EKL W PS+ I +GL+KTYFWI+ ++E E A G NY+ SE+V Q D+L L
Sbjct: 58 ISMNMLEAARRNKVKNFFYASSACVYNEAKQEDPKNPGLVESDAWPARPQDMYGLEKLYSEEMALAYGRDFDIKIRLARFHNIYGPRGTWKGGREKAPAAFCRKAITSTVDFEMWGDGLQTRSFTFIDDCVEGVLRLMYSDCDVPINLGTTEMVNMIEFANIALSFEEKSLPIRHVKGPMGVRGRNSNNVLIKEKLGWEPSIKIADGLKKTYFWIKGEIEQEKAAGKAENYSTSEIVQQVDDTLMEL 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6297.13874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6297.13874.1 >prot_H-elongata_contig6297.13874.1 ID=prot_H-elongata_contig6297.13874.1|Name=mRNA_H-elongata_contig6297.13874.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp MCKAYAKDFPIQTRIARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFback to top mRNA from alignment at H-elongata_contig6297:80..4320+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6297.13874.1 ID=mRNA_H-elongata_contig6297.13874.1|Name=mRNA_H-elongata_contig6297.13874.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4241bp|location=Sequence derived from alignment at H-elongata_contig6297:80..4320+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6297:80..4320+ >mRNA_H-elongata_contig6297.13874.1 ID=mRNA_H-elongata_contig6297.13874.1|Name=mRNA_H-elongata_contig6297.13874.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig6297:80..4320+ (Himanthalia elongata Himel1 dioecious)back to top |