mRNA_H-elongata_contig62710.13850.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A6H5KGL7_9PHAE (SGL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGL7_9PHAE) HSP 1 Score: 301 bits (771), Expect = 1.600e-99 Identity = 139/190 (73.16%), Postives = 161/190 (84.74%), Query Frame = 1
Query: 1 GQQVEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRKETIKAARAGKSVV-----AEPELLEK 555
G VE+VA+GFG TEG QW++D EA R+YL+FSDI NNRIWKWEEGGG+FTLGKSLFLDRSGCRG HC+ + + GSNGL + PGSGE+VMCEHGDRRVTRME NGTKT LATHFNG RLNSPNDLA SKRGD+YFTDPP GLPL ++DP F +HGFGGVYRIR+E I+AA+AG++ AEPEL+EK
Sbjct: 60 GATVEVVADGFGFTEGTQWVHDTEADRQYLLFSDIANNRIWKWEEGGGLFTLGKSLFLDRSGCRGAHCSSMEMSGSNGLMLVPGSGEVVMCEHGDRRVTRMENNGTKTPLATHFNGHRLNSPNDLAISKRGDIYFTDPPYGLPLRQKDPGFAAHGFGGVYRIRREVIEAAKAGEAGAREAAGAEPELMEK 249
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A835YH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH00_9STRA) HSP 1 Score: 210 bits (535), Expect = 5.380e-63 Identity = 102/174 (58.62%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGD--HCAGIRLPGSNGLTMAPGS-----GEIV--MCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRKETIK 504
+E+VA GFG EGP W++D+E GREYL+FSD+ NNR+WKWEEGGG+FTLGK++FL+RSGCR D CA ++ PG+NGL P S ++V MCEHG+RRV+ M +GTK ALATH +GRRLNSPNDLAF K GD+YFTDP GL PE GVYRIR +K
Sbjct: 85 IEVVAEGFGWAEGPVWVSDKEQGREYLLFSDVVNNRVWKWEEGGGLFTLGKTVFLERSGCRTDAERCAQLKEPGANGLARVPASLVGNDNDVVLAMCEHGERRVSLMRPDGTKVALATHHDGRRLNSPNDLAFGKNGDLYFTDPSYGLNELEASPE-RELDVNGVYRIRAAHVK 257
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: W7T4M9_9STRA (Gluconolactonase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4M9_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.110e-54 Identity = 95/200 (47.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query: 7 QVEMVANGFGQTEGPQWINDEE-AGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCR---------------------------------GDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRKETIK 504
Q+E++A G EGP W++DE+ A +L++SD+ N I++WEEGGG+FT+G+S+FL SGCR G CA +R PGSNGLT+ PGSG +VMCEHG+RRV+R+E NG+ T LATH+ GRRLNSPNDL F GD+YFTDPP GL DP FG VYR+ KE ++
Sbjct: 59 QLEIIAEGNLWAEGPLWVSDEDSADGGFLLWSDVKKNLIYRWEEGGGLFTIGRSVFLKESGCRPSLPPLASGGETETKDGNSSSDESCSDGICGDDGARCATLREPGSNGLTLEPGSGLVVMCEHGERRVSRLEANGSFTPLATHYQGRRLNSPNDLVFGPGGDLYFTDPPYGLNGLDADPARELESFG-VYRVSKEAME 257
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A534N9W9_9DELT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534N9W9_9DELT) HSP 1 Score: 163 bits (412), Expect = 7.860e-46 Identity = 88/183 (48.09%), Postives = 111/183 (60.66%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRKE-----TIKAARAGKSVVAEPE 543
+E +A+GF EGP W E YL+FSDIPNN ++KW+EGGG+ SLFL SG G + PGSNGLT SG +V+ EHGDRR+ R+E +G KT LA + G+RLNSPNDL F GD+YFTDPP GLP +DP+ F GVYR+ KE IK +A + P+
Sbjct: 66 LEKLADGFKWVEGPVWNRKEN----YLLFSDIPNNSVFKWQEGGGV-----SLFLKPSGYSGSAPFAGKEPGSNGLTF-DSSGRLVLAEHGDRRIARLENDGRKTILADRYAGKRLNSPNDLVFKSNGDLYFTDPPFGLPQAFDDPQ-KELPFQGVYRLSKEGKLTLLIKDIKAPNGIAFSPD 237
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A0T6A6A4_9BACT (Gluconolactonase n=1 Tax=candidate division NC10 bacterium CSP1-5 TaxID=1640516 RepID=A0A0T6A6A4_9BACT) HSP 1 Score: 161 bits (408), Expect = 2.330e-45 Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 1 GQQVEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRK 492
G +E VA GF EGP W + + G YL+FSDIPNN ++KW++G GI SLFL SG G R PGSNGLT P +G +V+CEHGDRR++R+E +G+K L + G+RLNSPNDL F+ GD+YFTDPP GLP +DP+ F GVYR+ +
Sbjct: 51 GATLEKVAGGFAWVEGPAW--NRKGG--YLLFSDIPNNAVFKWQDGAGI-----SLFLKPSGYTGAAPFQGREPGSNGLTFDP-AGRLVLCEHGDRRISRVEEDGSKATLVDRYEGKRLNSPNDLVFASNGDLYFTDPPFGLPKAFDDPQ-KELDFSGVYRLSR 203
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A0S8KSR1_9BACT (Gluconolactonase n=1 Tax=Phycisphaerae bacterium SM1_79 TaxID=1703410 RepID=A0A0S8KSR1_9BACT) HSP 1 Score: 157 bits (396), Expect = 1.100e-43 Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 1 GQQVEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRI 486
G ++E+VA+GF EGP WI D + G YL+FSDIP N + KW+EG G+ S+F+ SG G G R PGSNGLT+ G I+ CEHGDRR++R+E +G K LA ++ G+RLNSPND GD+YFTDPP GLP G DP F GVYR+
Sbjct: 36 GAKIEVVASGFEWCEGPLWIPDAKGG--YLLFSDIPRNSVMKWQEGVGV-----SVFMKPSGYTGITDYG-REPGSNGLTLDL-QGHIIFCEHGDRRISRLEKDGGKRTLADNYKGKRLNSPNDAVVKSNGDIYFTDPPYGLPKGTSDPR-RELDFCGVYRL 187
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A1G3ZYZ4_9BACT (Gluconolactonase n=1 Tax=Verrucomicrobia bacterium GWF2_62_7 TaxID=1802432 RepID=A0A1G3ZYZ4_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.370e-42 Identity = 80/161 (49.69%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRK 492
+E +A GF +EGP W+ + +IFSD+P N ++KW+ G G+ S+FL SG G G R GSNGLT+ G G V+CEHGDRRV R+E NG KT LA F G+RLNSPNDL F GD+YFTDPP GLP DP F GVYR+ +
Sbjct: 48 IEKLAEGFDWSEGPVWMPADGC----VIFSDVPRNTVYKWKAGAGV-----SVFLKPSGYTGQPKPGQREAGSNGLTLDTG-GRPVLCEHGDRRVARLEKNGRKTTLADRFEGKRLNSPNDLVFKSNGDLYFTDPPYGLPKLNNDPA-KELPFNGVYRLAR 197
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A2I6QHW4_9BACT (Gluconolactonase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A2I6QHW4_9BACT) HSP 1 Score: 153 bits (387), Expect = 2.990e-42 Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRI 486
+E++A+GF +EGP W D+ G YL+FSDIP N ++KW+EG GI SLFL+ SG G+ G + PG NGL + P G +V CEHGDRRV+ + NG K L ++ G+RLNSPND + GD+YFTDPP GLP+ +DP H FG VYR+
Sbjct: 50 MEIIASGFAWSEGPVWRKDDSGG--YLLFSDIPRNSVFKWKEGQGI-----SLFLNPSGYTGNTFYG-KEPGCNGLLLDP-QGRLVSCEHGDRRVSVLTENGGKRTLVDNYQGKRLNSPNDGTYKTNGDLYFTDPPYGLPMWDKDPLCELHFFG-VYRL 198
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A7Y5NC40_9BACT (SMP-30/gluconolactonase/LRE family protein n=2 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5NC40_9BACT) HSP 1 Score: 153 bits (387), Expect = 3.060e-42 Identity = 84/163 (51.53%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDH-CAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRIRKE 495
+E +A+GF EGP W E YL+FSDIPNN + KW G SLFL SG G AG+ PGSNGLT G +V+CEHGDRRV R+E NGTKT LA + G+RLNSPND+ F GD+YFTDPP GLP +DP F GVYR+ K+
Sbjct: 55 LEKIADGFSWVEGPVWNRTEG----YLLFSDIPNNAVMKWNA-----KEGASLFLKPSGYTGTAPFAGVE-PGSNGLTFDR-EGRLVLCEHGDRRVARLEKNGTKTTLADRYQGKRLNSPNDVIFKSNGDMYFTDPPFGLPKAFDDPS-REMDFCGVYRLSKD 205
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Match: A0A7V7D777_9BACT (SMP-30/gluconolactonase/LRE family protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7D777_9BACT) HSP 1 Score: 152 bits (383), Expect = 5.780e-42 Identity = 79/159 (49.69%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 10 VEMVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSLFLDRSGCRGDHCAGIRLPGSNGLTMAPGSGEIVMCEHGDRRVTRMETNGTKTALATHFNGRRLNSPNDLAFSKRGDVYFTDPPCGLPLGREDPEFTSHGFGGVYRI 486
+E++A+GF +EGP W+ D AG +L+FSDIP N + KW+EG GI SLF+ SG G G R PGSNGL + G I+ CEHGDRR++R+E G K L + G+RLNSPND A GD+YFTDPP GLP G DP F GV+R+
Sbjct: 42 IELLASGFEWSEGPLWVRD--AGGGHLLFSDIPRNSVMKWKEGAGI-----SLFMKPSGYTGVADYG-REPGSNGLALDL-QGRIIFCEHGDRRISRLEKEGGKKTLVDSYKGKRLNSPNDAAVKSNGDIYFTDPPYGLPKGARDPR-RELDFCGVFRL 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62710.13850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62710.13850.1 >prot_H-elongata_contig62710.13850.1 ID=prot_H-elongata_contig62710.13850.1|Name=mRNA_H-elongata_contig62710.13850.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp MVANGFGQTEGPQWINDEEAGREYLIFSDIPNNRIWKWEEGGGIFTLGKSback to top mRNA from alignment at H-elongata_contig62710:1736..3350+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62710.13850.1 ID=mRNA_H-elongata_contig62710.13850.1|Name=mRNA_H-elongata_contig62710.13850.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1615bp|location=Sequence derived from alignment at H-elongata_contig62710:1736..3350+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62710:1736..3350+ >mRNA_H-elongata_contig62710.13850.1 ID=mRNA_H-elongata_contig62710.13850.1|Name=mRNA_H-elongata_contig62710.13850.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig62710:1736..3350+ (Himanthalia elongata Himel1 dioecious)back to top |