mRNA_H-elongata_contig62709.13849.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.380e-20 Identity = 64/184 (34.78%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 1 SGMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKG-VLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILK-------------------TLRS-------LQVQVRYQKVELCW*KWYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
SG+ +A DN+FTSP LF CLA +FAVG R+ +DA L S G + RG + F R +A W DSK++F +STIH+ + +LR+ L +Q Y +++ Y M GVDL+DQ N H H++ FWRRV++ KL Q++TN
Sbjct: 488 SGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAY---------LESLGRTIPNRGDMNFCRSGQVACVQWADSKDIFLISTIHVAQPAKGKEEAGGIDHFKPLPLSLRAKGRNGEPLDLQQPYMRMD------YVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTN 656
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.290e-19 Identity = 64/166 (38.55%), Postives = 85/166 (51.20%), Query Frame = 1
Query: 4 GMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAK-AWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKT-LRSLQVQVRY-----QKV---ELCW*KWYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
G+ +A DNFFT L CLA +FAVG LR G A W E ERGQ+L R ++ W DS+EV+ +ST H+ L + R +KV + K Y + MGGVD++DQ HA HR + +FWRRVF+QK AQ+V+N
Sbjct: 152 GITVAMDNFFTGAPLLRCLATRDIFAVGTLRGNRIGVELANYLWAKEGM-------AATERGQMLTARSDELVIVKWIDSQEVYLMSTKHVFADEWEPLAYEKRAANNNGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSN 310
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6H5KMF5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF5_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 4.890e-19 Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 1
Query: 1 SGMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNS-KGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*K--W---------------YTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
SG+ +A DN+FTSP LF CLA +FAVG RS + P + S + G + F R ++AF W+DSKE+ ST+HI +T ++ V L W Y +YMGGVD +DQ N H HR+ WRRVF+ K+ Q +TN
Sbjct: 196 SGVFIAMDNYFTSPTLFACLASHEIFAVGTCRSPRTCGA---------LPYIQSLERTTPNPGDMTFCRSGEMAFVQWRDSKEILLCSTVHIGETGEEGGDINHFKPVPLALKGKGWAGKHKEHDQPVMRMDYVKYMGGVDRADQQNESHYHDHRSYTNHWRRVFDAKIMQMLTN 361
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A3B4TFC7_SERDU (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Seriola TaxID=8160 RepID=A0A3B4TFC7_SERDU) HSP 1 Score: 69.3 bits (168), Expect = 8.320e-11 Identity = 55/170 (32.35%), Postives = 83/170 (48.82%), Query Frame = 1
Query: 1 SGMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*KW-------------YTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
SG L CDN++TSP LFM L + V A G R R + K +S+G +R +MR + F W DSK+V STIH T+ S ++ R+ K + +W Y +YMGGVDLSDQ ++ H+ ++++ R +F+ + + TN
Sbjct: 379 SGYHLYCDNYYTSPKLFMELCSLKVCACGTYRDNRRESRTKKK---------DSRGTIR------WMRNGPLLFVKWMDSKQVSICSTIH---TVYSGEIAKRHVKGKDG--QWKIQNIPMPTPVAEYNKYMGGVDLSDQLIQYYSVHHKTMSWY-RLLFQHFIDIAATN 527
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6P7ISU6_9TELE (piggyBac transposable element-derived protein 4-like n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7ISU6_9TELE) HSP 1 Score: 66.2 bits (160), Expect = 9.620e-10 Identity = 51/162 (31.48%), Postives = 76/162 (46.91%), Query Frame = 1
Query: 22 DNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLR--ERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*KW----------YTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
DNF+TSP LF+ LAKM A G R ++G CP + R ERG + ++R + F W DS+EV STIH + ++ + ++ + CW Y + MGGVDLSDQ ++ HR ++R +F + + TN
Sbjct: 347 DNFYTSPQLFLDLAKMKFGACGTYRDNVKG-----------CPTGRENALTRKSERGTVRWIREDPLLFVKWMDSQEVSICSTIH--PAVSGEVIKRKVKEKDGCWAVKDILCPTPIIAYNKNMGGVDLSDQLIQYYS-THRQTTRWYRTLFFHFVDIATTN 494
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A3Q0QQV4_AMPCI (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Heroini TaxID=318529 RepID=A0A3Q0QQV4_AMPCI) HSP 1 Score: 65.9 bits (159), Expect = 1.290e-9 Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 1
Query: 1 SGMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*----------KWYTRYMGGVDLSDQYNAIHAFMHRAVNYF 426
+G L DNF+TSP LF L + + A G +R + G K ++N+ + RG + ++R + F W+D+++VFF STIH +++ +++ ++ W K Y ++MGGVDLSDQ + +H+ ++
Sbjct: 305 TGYKLYLDNFYTSPTLFRDLYQQRIRACGTMR--INGVGYPKT-------KINALDSIALRGSIRWLREDPLLFVQWRDTRDVFFCSTIHTAHGTETVKRKIKDKEGH--WSSKDIPIPPAVKDYNQHMGGVDLSDQLTGYYDVLHKTKKWY 445
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6J8C180_MYTCO (UNC45 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8C180_MYTCO) HSP 1 Score: 65.9 bits (159), Expect = 1.410e-9 Identity = 53/160 (33.12%), Postives = 76/160 (47.50%), Query Frame = 1
Query: 4 GMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIH---ILKTLRSLQVQVRY-QKVELCW*KWYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
G L DN++TSPILF L K+G A G LRS +G D + K V ++G+ + M + WKD ++V S+IH + T R+ +V + QK E Y +YMG VD DQ AF R + + W++VF L + N
Sbjct: 239 GHKLYVDNYYTSPILFHDLRKLGTGACGTLRSNRKGVPD------------DIKNVKLKKGESVAMTNGILQILKWKDKRDVHVCSSIHAAEFVNTGRNDRVTGQVIQKPEAIMD--YNKYMGAVDRCDQMITYPAFKRRTLKW-WKKVFFHLLMLATLN 383
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.460e-9 Identity = 53/158 (33.54%), Postives = 74/158 (46.84%), Query Frame = 1
Query: 1 SGMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAK-AWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*KWYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
SG+ +A DNFFT L LA +FAV R G + W E + ERGQ+L A T K + + H + + S Q R + V + MGGVD++DQ+ HA HR + +FWRRVF+QK +Q+V+N
Sbjct: 225 SGVTVAMDNFFTGAALLRYLATRDIFAVRTPRGNRTGVDLSNYIWSKEGMK-------VTERGQMLRP-----ARTSSKRAAD-------HNGEKVSSSQPLARKEHV---------KNMGGVDVADQWLGAHAHTHRPMTFFWRRVFDQKFSQAVSN 354
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A8B7ZQ32_ACAPL (piggyBac transposable element-derived protein 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZQ32_ACAPL) HSP 1 Score: 65.1 bits (157), Expect = 2.420e-9 Identity = 53/155 (34.19%), Postives = 71/155 (45.81%), Query Frame = 1
Query: 22 DNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*K-----WYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVFEQKLAQSVTN 471
DN FTSP LF L+ G A G LR+ G PE K L+ LL +R + W D ++V +ST+H T + V+ R QK K YTRYMGGVD SDQ + +H+ + + W++VF L S N
Sbjct: 336 DNLFTSPALFDDLSIHGTGACGTLRTNRVGT-----------PEAIKKAKLKTSDPLLSVREGKALYVSWFDKRQVNIVSTVHNATTFQK-NVRARGQKNPRKVDKPVAIECYTRYMGGVDRSDQGMWYYLNIHKTLKW-WKKVFVYILEVSYVN 477
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Match: A0A3N0Y9X3_ANAGA (PiggyBac transposable element-derived protein 4 n=2 Tax=Xenocypridinae TaxID=2743747 RepID=A0A3N0Y9X3_ANAGA) HSP 1 Score: 64.7 bits (156), Expect = 3.620e-9 Identity = 48/156 (30.77%), Postives = 66/156 (42.31%), Query Frame = 1
Query: 4 GMMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELNSKGVLRERGQLLFMRFRDIAFTLWKDSKEVFFLSTIHILKTLRSLQVQVRYQKVELCW*----------KWYTRYMGGVDLSDQYNAIHAFMHRAVNYFWRRVF 441
G L DNF+TSP LF+ L + + A G LR T PE N ERG + + R + F W D++EV STIH K V + + W K Y++YMGGVDLSD + + + W ++F
Sbjct: 904 GYRLYTDNFYTSPTLFLDLLQNSILACGALRQT------------SSLPETNDLSGRSERGSIRWCRQGPLLFVKWMDAREVLMCSTIH--KAFTGDTVTRNAKGADGVWKTRQIPVPSAVKDYSKYMGGVDLSDSLIEYYNVLQKTTK--WYKIF 1043 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62709.13849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62709.13849.1 >prot_H-elongata_contig62709.13849.1 ID=prot_H-elongata_contig62709.13849.1|Name=mRNA_H-elongata_contig62709.13849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp MMLACDNFFTSPILFMCLAKMGVFAVGRLRSTLRGASDAKAWFVEHCPELback to top mRNA from alignment at H-elongata_contig62709:274..1178- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62709.13849.1 ID=mRNA_H-elongata_contig62709.13849.1|Name=mRNA_H-elongata_contig62709.13849.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=905bp|location=Sequence derived from alignment at H-elongata_contig62709:274..1178- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62709:274..1178- >mRNA_H-elongata_contig62709.13849.1 ID=mRNA_H-elongata_contig62709.13849.1|Name=mRNA_H-elongata_contig62709.13849.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at H-elongata_contig62709:274..1178- (Himanthalia elongata Himel1 dioecious)back to top |