mRNA_H-elongata_contig62669.13841.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI) HSP 1 Score: 325 bits (832), Expect = 3.400e-105 Identity = 192/379 (50.66%), Postives = 228/379 (60.16%), Query Frame = 1
Query: 1 GSTSTVWMVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDI--RARRVRGPPYRRARAPVALRSLPKSPPLTAAAVGANIPVGRAPRARRPRGHNSSSSSSGGVPVGDQALRDHH-----SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEE----SGSGLGPEHFIP-------------------------------PEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTI--KEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
GSTSTVW VVD++TL +VAVKEMIV DSKQ +LRHEL VLHPQLQP + + +R+ G R + APV AA+ G N P PCP+MPRY+GSFV+ D GR VSIV+E++ GVDL RWIEE SG G G PE WL VCRD++EALRYLHER IHRDVKPANVLL PGGA+L DFGSTI +EDE G RMHGT+RFMSPERL R YRPSSDLWA GLT+A+ ALGENP+PH + +F+A HA AF+MV +HP ++ LSP LLDFLR VLVADP++RPT E+ML HP++
Sbjct: 72 GSTSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPVG----------DAASSGTNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGGSSGEGEGRREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPEMWLPRVCRDMLEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDDREDE-CGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A6H5K7A9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A9_9PHAE) HSP 1 Score: 335 bits (859), Expect = 6.740e-104 Identity = 197/374 (52.67%), Postives = 236/374 (63.10%), Query Frame = 1
Query: 1 GSTSTVWMVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDI--RARRVRGPPYRRARAPVALRSLPKSPPLTAAAVGANIP-VGRAPRARRPRGHNSSSSSSGG----VPVGDQALRDHHSPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEE----SGSGLGPEHFIP--------------------------PEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTI--KEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
GS+STVW VVD++TL +VAVKEMIV DSKQ +LRHEL VLHPQLQP + + +R+ G R + AP++ AA+ G N P + S S GG A PCP+MPRY+GSFV+ D GR VSIV+E++ GVDL RWIEE SG G G PE WL+ VCRD++EALRYLHER IHRDVKPANVLL PGGA+L DFGSTI +EDE G RMHGT+RFMSPERL R Y PSSDLWA GLT+A+ ALGENP+PH +T+F+A HA AF+MV +HP ++ LSP LLDFLR VLVADP++RPT E+ML HPFV
Sbjct: 73 GSSSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPISGAGAGD-----AASSGTNTPTIAXXXXXXXXSARRSGKKSLGGGKSVAAASTSAPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGGSSGDGEGRREXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPELWLSRVCRDILEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDGREDE-CGGRMHGTVRFMSPERLCARPYWPSSDLWAAGLTVASAALGENPVPHSATKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPFV 440
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A2R5H0J7_9STRA (Mitogen-activated protein kinase kinase 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0J7_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.660e-26 Identity = 73/215 (33.95%), Postives = 113/215 (52.56%), Query Frame = 1
Query: 370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
CP + ++G+F T+ + +SI +E++ LH IE+ G+ PE +A + + L YL +R+HRDVKP N+L + G KL DFGS+ ++ GT ++MSPER+ + Y +SD+W+ GL I LGE P P C+T D V+ + A P A+R SPE DF++ L DP +R E ++ P++
Sbjct: 123 CPALVGFYGAFFTECS-----ISIAVEYMDQGCLHSVIEKQGA--------IPEPAVAAIAYQALWGLGYLKHEKRVHRDVKPQNILCNSRGEVKLTDFGSSRDLENSVNVCQTFVGTFKYMSPERVQSQAYSYASDIWSLGLVILECLLGEFPYPDCNTYIDMVQTILEA---PIPLPPANRFSPEFSDFIQCCLHKDPSQRVFPEFLIGAPWL 321
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A2I0B120_9ASPA (Mitogen-activated protein kinase kinase kinase YODA n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B120_9ASPA) HSP 1 Score: 118 bits (295), Expect = 1.810e-26 Identity = 83/231 (35.93%), Postives = 121/231 (52.38%), Query Frame = 1
Query: 316 SSGGVPVGDQALRDHHSPCPHMPRYFGSFVTQDASGRSCV-SIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTIKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
SS V ++A+ CPH+ FG V+++ SG + ++ LE+ G D++ I SG GL PE+ + R ++E LR++H R +H D+KP N+LL G AK+ADFG + E + GT +M+PE L ++Y +D+WA G T A G P P TE AV + + + + P A +S E DFL V DP +R TAE +L HPFV
Sbjct: 38 SSASVLRREEAIISDLQGCPHIIGCFGHQVSEEPSGEPRLYNLFLEYAGGGDIYGLIRSSG-GL-------PEEAVRRHVRSILEGLRHIHARGYVHCDIKPQNILLVGGEAKIADFGLSNGE-------IRGTPLYMAPEALLRKEYEAPADIWALGCTAAEMFSGRRPWPE--TEVCAVIRRIGSSEEMPEIPPA--MSAEGKDFLSRCFVKDPRERWTAEMLLSHPFV 249
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A4D9DG65_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG65_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.160e-26 Identity = 73/217 (33.64%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAH--PRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
CP++ ++ F R V++++E++ G L + G E LA + R+++ L YLHER++IHRD+KP N+L+ G K+ADFG + + GT+ +MSPER+ +Y +D+W+ GL++ A ALG P + E A D + P R SPE DFLR+ L+ DP +RP+AE +L HP+V
Sbjct: 552 CPYIVSFYDIFADPV---RGTVNLLVEYMDGGSLEDLVRAGGCD--------DEAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPFERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKDPSERPSAETLLFHPYV 757
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A022QK86_ERYGU (Protein kinase domain-containing protein n=4 Tax=Lamiales TaxID=4143 RepID=A0A022QK86_ERYGU) HSP 1 Score: 115 bits (288), Expect = 7.480e-26 Identity = 73/220 (33.18%), Postives = 112/220 (50.91%), Query Frame = 1
Query: 364 SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLH-ERRRIHRDVKPANVLLAPGG-AKLADFG--STIKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPI--PHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
S CP++ + SF A +SI+LE++ G L ++++ I PEQ+LA VC+ +++ L YLH E+ IHRD+KP+N+L+ G K+ DFG + + G + GT +MSPER+ Y SD+W+ GL A G+ P P + E A D A + + SPE F+ + DP RP+A E++ HPF+
Sbjct: 121 SQCPYVVVCYQSFYDNGA-----ISIILEYMDGGSLDDFLKKVN--------IIPEQYLAAVCKQVLKGLWYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAILASTSGLANTFVGTYNYMSPERILGGNYGYKSDIWSLGLVFLECATGQFPYTAPQPEGWVNVYELMEAIVDQPAPRAPSDQFSPEFCSFISACVQKDPKDRPSANELMAHPFI 327
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: W7U1J4_9STRA (Mitogen-activated protein kinase kinase 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1J4_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.090e-25 Identity = 72/217 (33.18%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAH--PRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
CP++ ++ F R V++++E++ G L + G E LA + R+++ L YLHER++IHRD+KP N+L+ G K+ADFG + + GT+ +MSPER+ +Y +D+W+ GL++ A ALG P + E A D + P R SPE DFLR+ L+ +P +RP+AE +L HP+V
Sbjct: 823 CPYIVSFYDVFADPV---RGTVNLLVEYMDGGSLEDLVRAGGCD--------DEAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPYERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKNPSERPSAENLLFHPYV 1028
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: E1ZE46_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE46_CHLVA) HSP 1 Score: 114 bits (286), Expect = 1.630e-25 Identity = 69/210 (32.86%), Postives = 112/210 (53.33%), Query Frame = 1
Query: 385 RYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGA-KLADFGSTIKEDEGAG--HRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
R+FG++ + D R +++VLE++ G L ++ PE LA + ++ AL Y+H R +HRD+KPAN+L++ G K++DFG + D H GT+ +MSPER+ Y +D+WA GLT+ A G+ P ++ + + P A + SPEL DF+ + DP +RPTAE++++HPF+
Sbjct: 89 RFFGAYHSAD---RGQIAVVLEYMDGGSLADVVQRVQR--------IPEPVLAGITARILPALAYMHSRHMVHRDIKPANILMSTDGQPKVSDFGISAFMDNTIAQCHTFLGTVTYMSPERINGEAYSFPADIWALGLTLLECATGKYPY---DASGGTIQLMIQLMEEDCPLPPAGQCSPELRDFVAQCMRKDPWQRPTAEQLMQHPFI 284
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A7S2GCB3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCB3_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.420e-25 Identity = 82/253 (32.41%), Postives = 128/253 (50.59%), Query Frame = 1
Query: 346 ALRDHHSPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGG-AKLADFGS--------------TIKEDEGAG----------HRMH--------GTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
AL + +M Y G+FV+ + + S+++E + DL W+E +H +P E++LA + + +AL L+E++R+HRDVKP NVL++ G KL+DFG I+ + G G H GT R+MSPERL +Y S+D+WA GLT+A LGE P + + ++++ V + LS +L DF+ L DP++RP A++ML+HPFV
Sbjct: 439 ALDSNQKGSSYMVNYHGAFVSDEDNK---ASLMVEFMANGDLESWVEA-------KHELP-EEFLAVIAYQVCKALASLNEKKRMHRDVKPGNVLISSTGQVKLSDFGMCADVKGATDTGCDMNIRPNAGVGFASGSTILSRQERHSETLKDFVGTYRYMSPERLTADEYSYSADVWALGLTLATCVLGECPFSKDCSFWQLLQNSELPETEVL---KRQDLSTDLRDFITTCLKKDPNERPEAKDMLQHPFV 677
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A7S2BNN1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNN1_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.740e-25 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = 1
Query: 364 SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGSTIKEDEGA-GHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
SPCP++ +F +FV ++ V++V+E++ G L +E G EQ LA + +++ L +LH R++HRD+KP N+L+ + G K+ADFG + D A H G++ +MSPER+ Y S+D+WA GL++ A ALG PI T + A+ HA+ P + S L +L DP +R A+++++HPF+
Sbjct: 52 SPCPYIVSFFDAFVNPNSGS---VALVVEYMNGGSLQDLVELGGCS--------DEQLLASIAVQVLKGLEFLHNNRKMHRDIKPGNILINSRGECKIADFGLYRELDTSAVAHTFIGSLGYMSPERITGSDYGISADIWAVGLSLMAVALGRYPIEG-GTGYWALLHALTDRPPPTL-PEDAGFSDGFQGLLSCMLNQDPTQRWRADQLVDHPFL 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62669.13841.1 >prot_H-elongata_contig62669.13841.1 ID=prot_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=328bp MVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDIRARRVRGPback to top mRNA from alignment at H-elongata_contig62669:353..1357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62669.13841.1 ID=mRNA_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1005bp|location=Sequence derived from alignment at H-elongata_contig62669:353..1357+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62669:353..1357+ >mRNA_H-elongata_contig62669.13841.1 ID=mRNA_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1968bp|location=Sequence derived from alignment at H-elongata_contig62669:353..1357+ (Himanthalia elongata Himel1 dioecious)back to top |