mRNA_H-elongata_contig6183.13744.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6183.13744.1
Unique NamemRNA_H-elongata_contig6183.13744.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: D8LJC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC2_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 3.000e-79
Identity = 128/179 (71.51%), Postives = 146/179 (81.56%), Query Frame = 2 
Query:  371 LFRKH--LEEALRVTAGSG--VPGVGNPAYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIFG 895
            LFR++  LEEAL VTAGSG  V   GNPAYVL RL +L+EDDFMSAFDY  GG YP+ +DW+ +LPTDAA+VM+LFVCCSD LLP  WE+DRPFARQ  VDR P   DALPGRFFLT+N  LHPP+FFV+AD+  WHALPG TNVFQAIALFFHA+KT KS YLG GISVA+IV E+FG
Sbjct:  242 LFREYQVLEEALHVTAGSGTGVAAGGNPAYVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAADLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDALPGRFFLTRNEVLHPPHFFVIADQAYWHALPGSTNVFQAIALFFHAIKTRKSSYLGPGISVANIVNEMFG 420
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: A0A6H5KZ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ36_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 9.490e-76
Identity = 128/183 (69.95%), Postives = 146/183 (79.78%), Query Frame = 2 
Query:  371 LFRKH-----LEEALRVTAGSGV--PGVGNPAYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIFGS 898
            LFR++     LEEAL VTAGSG      GNPAYVL RL +L+EDDFMSAFDY  GG YP+ +DW+ +LPTDAA+VM+LFVCCSD LLP  WE+DRPFARQ  VDR P   DALPGRFFLT+N  LHPP+FFVVAD+  WHALPG TNVFQAIALFFHA+KT KS YLG GISVA+IV E+FG+
Sbjct:  469 LFREYQASGVLEEALHVTAGSGTGFAAGGNPAYVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAADLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDALPGRFFLTRNEVLHPPHFFVVADQAHWHALPGSTNVFQAIALFFHAIKTRKSSYLGPGISVANIVNEMFGA 651
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: A0A024UHH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHH6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.540e-28
Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = 2 
Query:  443 AYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEE--LPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            AY ++RL+ L ED F+  + +D GG +   K W+++  LP+DA ++M LF    DD+LP   + DRPF R H     P KS ++ G F +  +  + PP F V+A+  +W  LPG TNVFQAI LF HA+KT+KSG+LG  I++  ++ EIF
Sbjct:  351 AYAIQRLQTLGEDGFLGPYRWDSGGKW-KGKPWTKDSMLPSDAELIMNLFCAMLDDVLPATCDTDRPFRRTHYAPSPPTKSASIRGMFLIFCS-QVSPPNFKVIANGAVWEILPGKTNVFQAIVLFLHAVKTYKSGHLGN-INLHVLLEEIF 499
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: W4H5K2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5K2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.780e-28
Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 2 
Query:  443 AYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEE--LPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            AY + RL+ L ED F+  + +D GG +   K W+++  LP+DA ++M LF    DD+LP   + DRPF R H     P KS ++ G F +  +  + PP F V+A+  +W  LPG TNVFQAI LF HA+KT+KSG+LG  I++  ++ EIF
Sbjct:  341 AYAIHRLQTLGEDGFLGPYRWDSGGKW-KGKPWTKDAMLPSDAELIMNLFCAMLDDVLPATSDTDRPFRRAHYAPSPPTKSASIRGMFLIFCS-QVSPPNFKVIANGAVWEILPGKTNVFQAIVLFLHAVKTYKSGHLGN-INLHVLLEEIF 489
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: A0A3R7XTG6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7XTG6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.900e-27
Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 2 
Query:  443 AYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEE--LPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            AY + RL+ L ED F+  + +D GG +   K W+++  LP+DA ++M LF    DD+LP   + DRPF R H     P KS ++ G F +  +  + PP F V+A+  +W  LPG TNVFQAI LF HA+KT+KSG+LG  I++  ++ EIF
Sbjct:  829 AYAIHRLQTLGEDGFLGPYRWDSGGKW-KGKPWTKDAMLPSDAELIMNLFCAMLDDVLPATSDTDRPFRRAHYAPSPPTKSASIRGMFLIFCS-QVSPPNFKVIANGAVWEILPGKTNVFQAIVLFLHAVKTYKSGHLGN-INLHVLLEEIF 977
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: A0A3R6WQ77_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WQ77_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.150e-23
Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 2 
Query:  443 AYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEE--LPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKT 832
            AY ++RL+ L ED F+  + +D GG +   K W+++  LP+DA ++M LF    DD+LP   + DRPF R H     P KS ++ G F +  +  + PP F V+A+  +W  LPG TNVFQAI LF HA+KT
Sbjct:  220 AYAIQRLQTLGEDGFLGPYRWDSGGKW-KGKPWTKDSMLPSDAELIMNLFCAMLDDVLPATCDTDRPFRRTHYAPSPPTKSASIRGMFLIFCS-QVSPPNFKVIANGAVWEILPGKTNVFQAIVLFLHAVKT 349
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: K3X6G3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6G3_GLOUD)

HSP 1 Score: 100 bits (248), Expect = 7.510e-19
Identity = 52/151 (34.44%), Postives = 91/151 (60.26%), Query Frame = 2 
Query:  446 YVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCK--SDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            YVLERL +L++D  +  + +  G  +   K+WS+ LP+DA ++M +F C  D++LP   E+DRPF + + + + P +  + ++  R F+ +     PP+F V+A   +   +PG  N F AI +F HA+K  K+GYL + I++  I+ ++F
Sbjct:  375 YVLERLIMLSKDRSLDRYRWSKGSTW-KGKEWSDSLPSDAEILMNVFCCMMDNMLPADSERDRPFWKSYFLSKGPRRPFTPSVRSRLFVVRTVG-RPPHFKVLARAGVREIVPGEENCFHAIVVFLHAVKKMKAGYLES-INLHRIIEQVF 522
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: A0A5D6XQQ7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 9.750e-19
Identity = 52/151 (34.44%), Postives = 92/151 (60.93%), Query Frame = 2 
Query:  446 YVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCK--SDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            YVLERL +L++D  +  + ++ G  +   K+WSE LP+DA V+M +F C  D++LP   E+DRPF + + + + P +  + ++  R F+ +     PP+F ++A   +   +PG  N+F AI ++ HA+K  K+GYL + I++  I+  +F
Sbjct:  368 YVLERLIMLSKDRSLDRYRWNKGSAW-KGKEWSESLPSDAEVLMNVFCCMMDNMLPADSERDRPFWKSYFLGKGPRRPFTPSIRSRLFVVRTVG-RPPHFKILAKAAVREIVPGEDNLFHAIVVYLHALKRMKAGYLES-INLHEIIDAVF 515
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: W2M451_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2M451_PHYPR)

HSP 1 Score: 96.7 bits (239), Expect = 4.950e-18
Identity = 58/180 (32.22%), Postives = 98/180 (54.44%), Query Frame = 2 
Query:  371 LFRKH--LEEALRV--TAGSGVPGVGNPAYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCK--SDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            LF +H   E+ L V   + +    +    YVLERL +L++D  +  F ++ G  +   K+W+E LPTDA ++M  F C  D++LP   E+DRPF + +   + P +  +  +  R FL +     PP+F  +    +   +PG  N F AI ++ HA+K  K+GYL + I++  I+ ++F
Sbjct:  228 LFEEHQSFEKYLNVGDPSSTDYSSLERQQYVLERLIMLSKDRSLDRFRWNKGSAW-KGKEWTENLPTDAEILMNTFCCMMDNMLPADNERDRPFWKSYYFSKGPNRPFTPRVRSRLFLVQTVG-RPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLES-INLHRIIEQVF 404
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BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Match: W2M6K1_PHYPR (Uncharacterized protein n=27 Tax=Phytophthora TaxID=4783 RepID=W2M6K1_PHYPR)

HSP 1 Score: 96.7 bits (239), Expect = 1.000e-17
Identity = 58/180 (32.22%), Postives = 98/180 (54.44%), Query Frame = 2 
Query:  371 LFRKH--LEEALRV--TAGSGVPGVGNPAYVLERLRILAEDDFMSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRPFARQHLVDRQPCK--SDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPTNVFQAIALFFHAMKTHKSGYLGTGISVASIVREIF 892
            LF +H   E+ L V   + +    +    YVLERL +L++D  +  F ++ G  +   K+W+E LPTDA ++M  F C  D++LP   E+DRPF + +   + P +  +  +  R FL +     PP+F  +    +   +PG  N F AI ++ HA+K  K+GYL + I++  I+ ++F
Sbjct:  339 LFEEHQSFEKYLNVGDPSSTDYSSLERQQYVLERLIMLSKDRSLDRFRWNKGSAW-KGKEWTENLPTDAEILMNTFCCMMDNMLPADNERDRPFWKSYYFSKGPNRPFTPRVRSRLFLVQTVG-RPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLES-INLHRIIEQVF 515
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6183.13744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJC2_ECTSI3.000e-7971.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ36_9PHAE9.490e-7669.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024UHH6_9STRA2.540e-2843.42Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4H5K2_9STRA5.780e-2843.42Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A3R7XTG6_9STRA2.900e-2743.42Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3R6WQ77_9STRA5.150e-2343.18Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
K3X6G3_GLOUD7.510e-1934.44Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XQQ7_9STRA9.750e-1934.44Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2M451_PHYPR4.950e-1832.22Uncharacterized protein n=14 Tax=Phytophthora para... [more]
W2M6K1_PHYPR1.000e-1732.22Uncharacterized protein n=27 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6183contigH-elongata_contig6183:5454..10426 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.9
Seed ortholog evalue7.2e-55
Seed eggNOG ortholog2880.D8LJC2
Preferred nameTMEM209
GOsGO:0006810,GO:0006897,GO:0006909,GO:0008150,GO:0016192,GO:0051179,GO:0051234,GO:0098657
EggNOG free text desc.Cytochrome B561, N terminal
EggNOG OGsKOG4670@1,KOG4670@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1448
Cds size414
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6183.13744.1prot_H-elongata_contig6183.13744.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6183 6001..9939 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930997.6925197-UTR-H-elongata_contig6183:5453..60001622930997.6925197-UTR-H-elongata_contig6183:5453..6000Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6183 5454..6000 -
1691679655.8337915-UTR-H-elongata_contig6183:5453..60001691679655.8337915-UTR-H-elongata_contig6183:5453..6000Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6183 5454..6000 -
1622930997.7816143-UTR-H-elongata_contig6183:9939..104261622930997.7816143-UTR-H-elongata_contig6183:9939..10426Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6183 9940..10426 -
1691679655.899031-UTR-H-elongata_contig6183:9939..104261691679655.899031-UTR-H-elongata_contig6183:9939..10426Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6183 9940..10426 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930997.713504-CDS-H-elongata_contig6183:6000..61021622930997.713504-CDS-H-elongata_contig6183:6000..6102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 6001..6102 -
1691679655.8469474-CDS-H-elongata_contig6183:6000..61021691679655.8469474-CDS-H-elongata_contig6183:6000..6102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 6001..6102 -
1622930997.7302847-CDS-H-elongata_contig6183:7007..71101622930997.7302847-CDS-H-elongata_contig6183:7007..7110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 7008..7110 -
1691679655.8573012-CDS-H-elongata_contig6183:7007..71101691679655.8573012-CDS-H-elongata_contig6183:7007..7110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 7008..7110 -
1622930997.7474253-CDS-H-elongata_contig6183:8152..83291622930997.7474253-CDS-H-elongata_contig6183:8152..8329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 8153..8329 -
1691679655.8679936-CDS-H-elongata_contig6183:8152..83291691679655.8679936-CDS-H-elongata_contig6183:8152..8329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 8153..8329 -
1622930997.7649257-CDS-H-elongata_contig6183:9907..99391622930997.7649257-CDS-H-elongata_contig6183:9907..9939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 9908..9939 -
1691679655.8788426-CDS-H-elongata_contig6183:9907..99391691679655.8788426-CDS-H-elongata_contig6183:9907..9939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6183 9908..9939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6183.13744.1

>prot_H-elongata_contig6183.13744.1 ID=prot_H-elongata_contig6183.13744.1|Name=mRNA_H-elongata_contig6183.13744.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MSAFDYDHGGMYPSSKDWSEELPTDAAVVMRLFVCCSDDLLPPLWEKDRP
FARQHLVDRQPCKSDALPGRFFLTKNGDLHPPYFFVVADENIWHALPGPT
NVFQAIALFFHAMKTHKSGYLGTGISVASIVREIFGS*
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mRNA from alignment at H-elongata_contig6183:5454..10426-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6183.13744.1 ID=mRNA_H-elongata_contig6183.13744.1|Name=mRNA_H-elongata_contig6183.13744.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4973bp|location=Sequence derived from alignment at H-elongata_contig6183:5454..10426- (Himanthalia elongata Himel1 dioecious)
TCACCGCCCTCCTCTTCATCCTCTACGTCCTCCTCTGTAGTCAACACTGA
GAGTCCCTCGTTTACAGCCTGCATGTGGTGGTGAGGGGTACAAAGGGGGC
CCGTGAACAGTTTTGACTACCACCCCCCCATGTTTTGTAAAAGCGCGGGG
CACCCTGGTTTTGAAAAAATGACGTCGTTAACCCGGGGAGTTTCCTTAGC
ACGAGCGTCCTTAAAGCGGGATCGACTGTAATATAATATATATAGTTAAA
CCCTCGAAATTAACGCCTTCACCCGGCACGTCCAACTCCCATATTGCTTG
CAATATACCGTGTCCCTGTTTCCATTGGTTTGGGACTTGTTCTCTGACTG
TAACTGTACGTGTATCGCTACTTTTCCGGAAGCATTTGGAGGAGGCGTTG
CGGGTGACGGCGGGGTCCGGGGTACCGGGCGTTGGGAACCCCGCGTACGT
GCTGGAACGCCTGAGGATCTTGGCTGAAGACGACTTCATGTCGGCCTTTG
ATTACGACCACGGAGGAATGTAAGCACGGAGCACTCGTACCTTGTGTGAC
GGGGTATGCAACGAAATAGTACCGACATACATAAGTGTAATTATTTCAAG
AACGCCCCCCCCCCTTCCTCCTAACTTTAACCCTAACCCTAAGACAAAGA
GATGACGGCAACAAGGATATATATATATATATATATATATATTGAGATGT
ATATATATAATAGGTGTGTTAAACGCATGTCGTATTCTAAGGGGCATTGA
CGAGACATCCCAACAGCCCCGAGATGGAGCAATATTATACTTACGCCATA
CAGTACCGAGTTTTCGCCGGCCATGCTTCGGTTTACAGGGATAATACATA
ATACCATATTTTCATCATAACCCTTACGTATTTAGTTCGCCGAACCGGGC
ATGCCGTGGTTGATTGGACACAGCCACACTTGATGATAAAACGTAGCACA
TTCAGCGGGTGCAACTATACTATACTAACTGTACTATACTATACAATATA
TTAAACTCCAAGTACCACAAATGGACTCTCACCTCCGCGCGAAGGCATAA
TCGCCGCACGCATACTAGTTTCACAATTGTACATTGTATGCTGTGTATTG
TATATTGTATGAGTGGCAGAATACTCTCAGGAGTACTCTCATAGTCTACG
GCTGCTATAGTATTATCCAACGATCCTTTGTTCAGCAGGCATCCTTTAGA
ATGTGATGCGTTCCACCGCTTTAAAGAGAGACAAGACTCTGTGACCAAGG
TCTCTGAGCTCACAGGACACACCTCATGAACTAACTCCCCCATGCCGTAA
AAACTACCACTTCTACAGCTCGTACCGATGCCGATACCGATGCCAAAAGA
GACAACCAGGGAGGGAAGTTCCACCGCATCATCTGGCAAATTTACAAATA
TTGGGCTTTCTTTGAGAGGAGGCGTGATCCCCAAACCCTGCACTCACCAT
CACATCCTCTAGCTTTAGGCCATGGCTCGCAAGGGGAATTTTTTGCTGTG
GCCACGCAGCCGAATATGGTGGAGGGTGGGGGCAACTGCTGAGTTAGGTT
GCCTGAGACATAAAGATGGGTTCTCTATTCAGACTTGTGGTCAGCGCTCC
AGAATGAAACTCTAGCATGAAAGCAGTAGTCTTGTGCGATGTGTGAGACC
CTGGCGGGTAGGGCATGTTTGATATCCTGTACCCAGATCTAAAAGTAAAA
CCTGCCATTTTGGTGAAATTTGTGTTCCATAACGTGCAGCAGCAGTCAAT
TGCCACTGTCGTTTGGGTGACTCGTCGAGGCCTTTATAACAACAACGACA
TCAACAACATACTATAGAACATACTATAGCCTAGTGACCACGAATACACT
TGCGTTGGACTGCACTTTGCGCAACGTAGCTGCCGATACCAAGATATCCT
ATTTAAATAGCCGTTAAGTTTGCCCTTTATTTATGAATGAGTTGAGTATT
GAAAATGTGAAGTATTGAAGGTAATGCCGGGTCGGGTGGCAAAGAGCTCG
TATAAGCATTTTCTCATAGCTCTCGTTTAAACTAATTTATCCTTACCCTA
ATAATCTTCTGATTCCGTCTATCCTGACTGTGCGTCCCTCGAAAAAGGTA
TCCATCGAGCAAGGACTGGTCCGAGGAGCTACCGACGGATGCCGCAGTGG
TCATGCGCCTGTTCGTGTGCTGCAGCGACGATCTCCTGCCTCCGCTTTGG
GAGAAGGACCGCCCCTTCGCGAGGCAGCACTTGGTTGACAGGCAACCCTG
CAAAAGCGATGCTCTGCCCGGAAGGTTGGCTCTAGGAAGCTCAATCACTT
GCTCCGGCTAACTAACTATTAAGAACTGTATTAGTAAATAGTAGATATTG
ATTAGATATTGATATTTAGGGGTATTCTTTTATTTTCGCTTTCTCGATGA
CCGATGGGGTAAGTCACCACTTTTTCTTATCCGCCTGGGGCCCTATGGGC
GGGTATTAACGAGATTACAAAATTTTTAATTCCAGCCGATTTAAATTTAT
ATCGAGCTCTGATTGGACGAACGCTAGGCGTTATTTAGCTTTCGACCAAT
CAGAGCCCAATTTAAATTTAAATCGGCTGGAAGGGATATTTTAAAATATT
TAGGAATATATCAACCCATCTCTCCTATTTTATCGCTATCGATACGAATT
ATCACTGGATTACAGTGTTGACCGTATTCACAGCACTCGCAACACCTCGC
CAACTATACAATGATTGATCTTCGCTTTCTCCCGTTTCATAGTATTATTA
GTAGTGATATGAATTATACTATTAATAGTGTGGACTATTACCGCCGCAGA
AATAAATAGCAATCTTGGCAAGAATCTAATTAGTGATTTCCGTATTATAG
TAGCATTATAACCTCGGCATCTATTCGTATTATACTATCATAGTAATCTA
ATATCTGGTGGTAATTATGAAGCATAGGTTGAACCTGACGAAGATTTTTT
ATTAGAGAAAAACATATGAACTCTCGATGAGACCATTCCCAACCTCCCGA
GTGATGTCTATAGTATAAACGTGAAGAGTTCTCTCGCCATCGGCCTGGCG
ATCAAAACAATATAAAACAATATGGAGGCAGTAATGAAGGGGGGGGAGTT
TCCGTCTTTCCCCGGGGTGTGTAACATGTACAGTAGTTTATACTAAAAAC
AATACACAAGACAAGTGTTTTTGTGTCGTGTCTTGCTGCCCCGCACTCCC
GGATCGACTCCAGTCGGCCACGCTCTGAACCTCTGGGACGTACTGAAGGT
AGTTGGTCGAGCAGCCCGGCCTTGATTTGCCTTGTATTGCGTTGACGTGC
TCGCGGCCCGCGGCAGGTTCTTCTTGACGAAGAACGGCGATCTCCACCCT
CCGTACTTCTTCGTGGTGGCCGATGAAAACATATGGCACGCGCTGCCCGG
CCCGACCAACGTCTTTCAGGTGGGCTCTAGTTGGTTCATTTCGTTTCGTT
TCTTTTACGAACTAGCGCTATTTATGCTATAATTATATTACTACTATTTT
ATATTATAATTATATATTATAATACTATAATCAATACAAAAATAATATCA
CTTCTGTTACTATAAATATATTACTACTACTCCCACTGCCACGGTGTTTG
TGTGAAATGGGAAATGGGTCCGTCTCTCCTGTTTGGTCTATAATACTATA
TATTAATACACCACACTACACTTCTATTAATAGTACCGCCTTAGTGGTAT
ACTTGAAGTGCGTATAACGAGGGGATTTAGTCCTTATGTGGTCGCGTCAG
GCCTAGAGGCTTGGCTCTAAGACTACGACGTTAGAGGACTGTGTTTTACT
TTGCCATAGTAAAGGGTTAGGGTTAGGTCGATTGTCGTCCCGGTTATATG
TGTAAATATACTGCGTACAGTATATATTTGTGGTTATTACGGAAGGACAT
TTTGTGCTCAAAAGTAGTAATGTACACATTTGAACCTGACGATAGTTGGT
CCTCTGGACTGCACCTCTCACGGCGCTAAGAAGCTGTGGATGTTCAGAGG
GTTGTAATGAGTTCATGGTAAATAAAAATAAAAAATGGGTAGAATCGAAC
TCACGTATTCTGCACTATAATAATATTGTGATACTATTAATATACTATGC
GGCGCCACTTGTCTGGCATAGCTTTGCTTGCACGATAGCTTCTATGATAG
ATTAGGTGCCGTGTGGTATTCGATCGAAATCCCTTAGACCGTAGTACTCA
CTAACCTTCAGCTGTATATGTATATATAAAGTATTTATACTATATACAGT
ATATAACAGCGGTTTGGGGGTAGTTTTATATTATAACAGCGGTTTGCTCT
TTCTCCCATCTGTGCTTGGGGCAGGCGATCGCCTTATTCTTCCACGCCAT
GAAGACACACAAGTCCGGGTACCTGGGTACCGGAATCAGCGTGGCTTCAA
TCGTGCGGGAGATCTTCGGCAGCTAGGCTAGGTGGAGGAAAGAGAGAGAG
ACCTAGCGGCCAAGTCATGGTCTATGGTGTGTGGTGTGTGTTGTATTTCT
GGAGAGAATTGAACAAAATATTATCTGGGTTGTCCTTTATTCTGGCCGCT
GCAGCCAACGTTTTATGGTGTGTGTGGTATACGAAGCAGGGTACTGACGC
CTTCCTTGCTACTCACCGAAAACTAACGATTTTGCTTATGACAGACTGCA
AACTGACTTTCTGATGACAGACTGTTTGGCTTGCTGACTAGGTCACTAGC
ACAATGTGGTACTCTATAATTCAGTATAGTATATATTATAGTACTGTTCT
GTATTGTATTGTATTGTATTGGAGTTCACTGTTCTATTGGTATTTGTTTC
GCTGAGACTGACCTAGGCAGCGCGGCGTTCTGACGGGGGGAGGCCACACT
GGTAACCTTCGGTAAATTCAACTGAAAATGCCGAGAGGGAATAGTGTAAA
AACTCAGACAAAACCCACTTCTCTTGGCACTCCCACTGCGCGTTGAACGA
ACCTGACATCGACTTGTGCGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig6183:5454..10426-

>mRNA_H-elongata_contig6183.13744.1 ID=mRNA_H-elongata_contig6183.13744.1|Name=mRNA_H-elongata_contig6183.13744.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at H-elongata_contig6183:5454..10426- (Himanthalia elongata Himel1 dioecious)
ATGTCGGCCTTTGATTACGACCACGGAGGAATATGTCGGCCTTTGATTAC
GACCACGGAGGAATGTATCCATCGAGCAAGGACTGGTCCGAGGAGCTACC
GACGGATGCCGCAGTGGTCATGCGCCTGTTCGTGTGCTGCAGCGACGATC
TCCTGCCTCCGCTTTGGGAGAAGGACCGCCCCTTCGCGAGGCAGCACTTG
GTTGACAGGCAACCCTGCAAAAGCGATGCTCTGCCCGGAAGGTATCCATC
GAGCAAGGACTGGTCCGAGGAGCTACCGACGGATGCCGCAGTGGTCATGC
GCCTGTTCGTGTGCTGCAGCGACGATCTCCTGCCTCCGCTTTGGGAGAAG
GACCGCCCCTTCGCGAGGCAGCACTTGGTTGACAGGCAACCCTGCAAAAG
CGATGCTCTGCCCGGAAGGTTCTTCTTGACGAAGAACGGCGATCTCCACC
CTCCGTACTTCTTCGTGGTGGCCGATGAAAACATATGGCACGCGCTGCCC
GGCCCGACCAACGTCTTTCAGGTTCTTCTTGACGAAGAACGGCGATCTCC
ACCCTCCGTACTTCTTCGTGGTGGCCGATGAAAACATATGGCACGCGCTG
CCCGGCCCGACCAACGTCTTTCAGGCGATCGCCTTATTCTTCCACGCCAT
GAAGACACACAAGTCCGGGTACCTGGGTACCGGAATCAGCGTGGCTTCAA
TCGTGCGGGAGATCTTCGGCAGCTAGGCGATCGCCTTATTCTTCCACGCC
ATGAAGACACACAAGTCCGGGTACCTGGGTACCGGAATCAGCGTGGCTTC
AATCGTGCGGGAGATCTTCGGCAGCTAG
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