mRNA_H-elongata_contig6179.13737.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6179.13737.1
Unique NamemRNA_H-elongata_contig6179.13737.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 7.720e-226
Identity = 339/528 (64.20%), Postives = 404/528 (76.52%), Query Frame = 1
Query:    1 LMLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEV-GRDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPT---IKTSPIPVAG-QGGPKRPRLNPLEAAAAAHTVSSSIAGD--STDEIREKMFTIVDMEVSAFKTAPGIRVSKV----VGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYLRNVWDVVDGWKKSASKKR 1551
            LMLD EFVAITTD WTSR N+S+MSLT+ YID++WKLH L LDC+KHTGTTT EDLA  +A M+ERH LTGRV+ACVTDCEPS+IKAG L+EV G  +SHIGC NHR+ESTTSSVFNG+SLGAL LAR +VGRY  SSQMA RL  +CGIL++  L +MQDVETRWWSTWAMV  LLYLMK IK H+S+D ++PLLSDT+W+VLRLI+ IL PFM A+K LEGA+YVTGS+ I  +A +R+GL+AAI DL+ V+   L +  ++AM  V  D +AL ADFTNRWGDG NILEY+EGKRRQPQG K +QV ATALDPR KHLYGI   E  GVWRAVAS A+++AL   + +K       P    ++T P P+ G QG  KRPR++  EAAAA             S DE RE++  IVDMEVSAFK APGIRV  +     G K V+ +PL  WR K+ E+P LAALARRVLAIP+SQAQSER+FSTAGL +TPTR+RLL ENVELLVYLRNVW VVD WKKSA++K+
Sbjct:   34 LMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKSATRKK 561          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 2.640e-197
Identity = 294/480 (61.25%), Postives = 364/480 (75.83%), Query Frame = 1
Query:    1 LMLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVG-RDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPT---IKTSPIPVAGQGGPKRPRLNPLEAAAAAHT--VSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRVSKV-VGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERM 1419
            LMLD E+VAITTD WTSR N+S+MSLT+ YID  W+LH L L+C+KHTG+T  EDLA+ I +MIERHGLTGRV ACVTDCEPS++KAG L+EVG  +L HIGC NHR+ESTTSSVFNGKSLGAL+ AR VVGRY  SSQM+ RL    GIL++S L ++QDVETRWWS+WAM+  LLYLMK IK H+S DNI P+LS+T+W+VLRLI+ IL PFM A+K LEGA+YVTGS+ +P +  +R+GL+AAI DL       ++ + REAM  V  D +ALW DF NRWGDG +ILEY+EGKRRQPQG KL+QVCATA+DPR KHLYGI   E   VWRAVA++A+++A    SS+  A   + P    + T P+   GQG PKR RL+  EAAAAAH    +SS  G + DE RE++ ++VD+EV++F+T PGI +      GK VY DPL WWRT++ EFP LAALARRVLAIP+SQA SER+
Sbjct:   70 LMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 1.350e-124
Identity = 236/544 (43.38%), Postives = 316/544 (58.09%), Query Frame = 1
Query:    7 LDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSP-ELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVP-----------------------------------------VTTPTIKTSPIPV--AGQGGPKRPRLNPLEAAAAAHTVSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRVSKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYLRN 1503
            + GE VA+T+D WT   ND++MS T TYI   + L  L L+C KH   T  EDL + + AMI R+GLTGR VA  TDCE S++KAG L+E    ++H+GCF HRLES TS  F G  +  AL+LARGVV RYT SSQ + RL  +C I+++    ++QDVETRWWST+  +  L+ L + I  H+ ID+  PLL + +W+VL+L++ +L+PFM A+K LE ++ VT  LV P +A ++DGL  A+E L+  S P E   A  +  VI+C+  QAL  D + RWGD  ++L Y EG RRQP+G K  QV ATAL PR K LYGI   E   VW A A+EA+++A+ +K++E                                                +    +SPIPV  A                  AH      A  S+  +R +M +I+  EV AFK  PG+ VS    G+ V   PL WWR K  E+P LA+LARRVL IPA QAQSER+FS+AGL++T TR R+ PENV L+V+LRN
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCA--QALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 7.110e-98
Identity = 201/516 (38.95%), Postives = 284/516 (55.04%), Query Frame = 1
Query:    7 LDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPTIKTSPIPVAGQGGPKRPRLNPLEAAAAAHTVSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRVSKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYLRNVWDVVDGWKKSASKKR 1551
            L GE VA+T+D WTS  ND++M  T TYI   + L  L ++C KH G TT EDL + + AMI R+GLT R VA  TDCEPS++KAG L+E    ++H+GCF HRLES TS  F G  +  AL+LAR VV RY  SSQ + RL  M  I+++    ++QDVETRWWST+A +  LL L + I  H+ ID+I PLL + +W+VL++++ + +PF+L++K  E ++ VT SLVIP +A +RD L  A+E L+  + P        A  IV    + ++  F  +     +++        +P+G K +QV ATALDPR K LYGI   E   VW AVA+EA+++A+ +K++E       +    +S IPV              + AAA     S++ GD          T                                                 RVL IPASQ QSER+FS+AGL++T TR R+ PENVEL+++LRNV   VD W  + +K++
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACP--------AESIVAEAKKDVF--FAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDT----QSAGASSSLIPVEPAAXXXXXXXXXXDFAAA-----SAVPGDKQQSANASSST------------------------------------------------SRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGNGNKRK 486          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.230e-87
Identity = 172/383 (44.91%), Postives = 230/383 (60.05%), Query Frame = 1
Query:   49 SRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSP-ELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPTIKTSPIPV--AGQGGPKRPRLNPLEAAAAAHTVSSSI 1185
            S  ND++M+ T TYI   + L  L L+  KH G TT EDL + + AMI R+GLTGR VA  TDCEP ++KAG L+E    +SH+GCF HR ES TS  F G  +  AL+L RGVV RYT SSQ + RL  MC I+++    ++QDVETRWWST                   ID+I PLL++ +W+VL+L++ +L PFM A+K LE ++ VT SLV   +A +RD L  AIE L+  S P E   A  +  ++ C+   AL  D + RW DG ++L Y EG RRQP+G K +QV ATALDPR K LYGI   E   VW AVA+EA+++A+ +K++E       +    +SPIPV  A     +  R      A+AAH  SS +
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAP--ALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDT----QSAGASSSPIPVEPAAAAAYQPRRRRGFATASAAHGASSKV 363          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.670e-57
Identity = 142/352 (40.34%), Postives = 192/352 (54.55%), Query Frame = 1
Query:    4 MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLS-HIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSPELTDAP-REAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSE 1050
            +++GE V IT+D WTS  ND++MSLT T I   WKL TL +DCSK  GTTT + LA GI A + +HGLTG+V A  TDCEPS++K G L+     +S  IGC N+RLEST+S VFNG  +   + LARG+V RY  SSQ A RL                                    + +K +  +DN                          K+ ++  + VTGSLV+P +  +R+ L+ AI+DL  V  P  +DA    A   V   ++AL  D+ +RWGDG NIL YKEG RRQP G K   V ATALDPR K  YG+  +E   VW+ V  EA+++A+ ++++E
Sbjct:   35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLK-----------------------------------QFVKTYLGVDN--------------------------KRVIQ--DVVTGSLVVPFIYDLRNSLEDAIDDL--VELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAE 321          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.090e-45
Identity = 108/262 (41.22%), Postives = 143/262 (54.58%), Query Frame = 1
Query:  832 DFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPTIKTSPIPVAGQGGPKRPRLNPL--------------------------EAAAAAHTVSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRV-SKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYLRNVWDVVDGWKKS 1536
            DF NRWGDG NIL YKEG+RRQP G K  QV ATALDPR K LYG+  +E   VW+ V  EA+++A+ +++SE         + + S      Q GP                                  +A   A T       DS+      + + V +E++AFK + GI++  +   G  VY DPL WWR +  +FP LA LARRVLAIPA+QA+SER+FS AG I+T  RN L P  VELLV LR+ W +V+ W++S
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSEN--------SQRAS-----SQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSS--FVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: UPI0018935EA0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI0018935EA0)

HSP 1 Score: 134 bits (337), Expect = 2.000e-30
Identity = 142/507 (28.01%), Postives = 218/507 (43.00%), Query Frame = 1
Query:   22 VAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGALSLARG-VVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNI-------------NPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLE-DVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPTIKTSPIPVAGQGGPKRPRLNPLEAAAAAHTVSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRVSKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYL 1497
            VA+T+D WTSR  DS++++T   +D +WK     L         T E++ + +  +I    L G+V A VTD   + IKA   +    + + + C  H L  +     + K +  L    G +V  + +S+  + +LT    +L +    + Q   TRW ST+ M      L K+IKH  +I ++             N  +S   W V+  +  +LEP  LA         +    V P V+M+R  +KA I+ LE   S   L +  +E + +  S        F+  W               QP+ +  RQ  A+ LDPR+K L      E PG   A+ +   EM     +S+  +   TT T  T+ + +       +PR++ L A   A+     I  +S                                      D L WW+  E +FP LA LA++ + IPAS A SER+FS+AG IIT  R+ LLPENV  LV+L
Sbjct:   61 VALTSDCWTSRAQDSYITVTAHTLDSEWKSQAFTLATEAMQERHTGENIMQRMQEVIAVWKLDGKVTAVVTDNASNGIKAVNALRGILEPNDVTCSAHSLHLSIKKALSDKEIDGLCQKSGKLVAHFRHSTIASDQLTRRQELLGLPTERLTQSCPTRWSSTYQM------LAKLIKHRPAIQSVLADRTIVTANSAQNLEISQQEWNVISELCEVLEPLQLA------TNILCSDTVSP-VSMVRPVMKALIKKLEPQTSGDHLVENFKEIIRLEIS------RRFSLDWDA-------------QPRSVSARQR-ASFLDPRYKSLQ----YEVPGAREAIRANVREMLDDLATSDDQSGTDTTQTEATA-LDILFDA---QPRVSGLSAQFEAYLSEPQIGHNS--------------------------------------DALKWWKDHESKFPRLAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLVFL 488          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: UPI001E1DF359 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF359)

HSP 1 Score: 134 bits (336), Expect = 3.300e-30
Identity = 133/530 (25.09%), Postives = 229/530 (43.21%), Query Frame = 1
Query:   22 VAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERH----GLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGAL-SLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVI-------KHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*VAMMRDGLKAAIEDLEDVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMA------LRSKSSEKVAVPVTTPTIKTSPIP-------------VAGQGGPKRPRLNPLEAAAAAHTVSSSIAGD---STDEIREKMFTIVDMEVSAFKTAPGIRVSKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYLRNVW 1509
            VAITTD WTSR  +S++++T+T+I+  WKL    L       + T E++A+ I   ++      GL G V   ++D   ++IKAG   +V     HIGC  H L          KS+  L +  R +V  +  S      L +   +L +    +  DV TRW S + M+N  L L   +       +     D     +SD N  + + +  +L+P       L      T S+++P    + + +    ED  D+ +             +    Q + AD T R+ D   +L                    +A+DPRFK L  +  ++   V+  +  EA+ ++      ++ K+ +   V +T  T+   P+P             +     P   + + +   A   +V + I G+   +  E  +    +  MEV  +K+ P + ++          +PL WW+ +E  FP L+ LA+ +L IPA+   SER+FSTAG I+T  R  L  ++V+ L++L+  W
Sbjct:   30 VAITTDGWTSRATESYVTITVTFINVDWKLVNFVLQTRPLPESHTAENIAEVIEYAVKEWKLPTGLGGTVPPVISDNAANMIKAG---KVLGCTIHIGCLAHTLNLAVQKALKVKSVSQLLARVRSIVSFFHRSCVATAVLKSKAQLLGLPNHKLKTDVCTRWNSAFEMLNRFLELQAAVVATLTSKEMMHMKDKTLHSISDQNLTLAQEVSVMLKPVKEITTMLCTESLPTVSVIMPLHFKLTNKILQPNED--DLHA-------------IVEMKQIMRADLTQRYLDKTELLN-----------------MTSAIDPRFKQLPYLSDDDRFAVYNHLTEEAIRVSAVVPAVVKVKTKKSEPVTMTKATVSQPPLPSLPTDMLEDQSDEIVCDTAPAIKQESQI--VATPKSVLNDILGEVFIARVEAPKSSQELAQMEVIQYKSEPPVSLND---------NPLQWWKQRELRFPFLSKLAKCLLCIPATSVPSERVFSTAGDILTAQRASLKAKHVDKLIFLKKNW 513          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A1X7T780_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T780_AMPQE)

HSP 1 Score: 133 bits (334), Expect = 1.230e-29
Identity = 124/501 (24.75%), Postives = 225/501 (44.91%), Query Frame = 1
Query:   19 FVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGALS-LARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLL---YLMKVIKHHDSI---DNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*V-AMMRDGLKAAIEDLEDVSSPELTDAPREAMVIVCSDVQALWADFTNRWGDGINILEYKEGKRRQPQGLKLRQVCATALDPRFKHLYGILPEE*PGVWRAVASEALEMALRSKSSEKVAVPVTTPTIKTSPIPVAGQGGPKRPRLNPLEAAAAAHTVSSSIAGDSTDEIREKMFTIVDMEVSAFKTAPGIRVSKVVGGKTVYKDPLGWWRTKE*EFPTLAALARRVLAIPASQAQSERMFSTAGLIITPTRNRLLPENVELLVYL 1497
            +V++T+D WTSR   ++++LT+ +I   WK+ +  L   +     T E ++  +++  ++  +  ++VA V D   +++ A  L++   D   + CF H L+    +  +   +  +S + R +VG + +S +    L      + IS   ++QDV TRW ST+ M   L+   + +  + H D+I   D  +  L    W++L  +  +L+P  +A   L   + V+ SL+ P V  +++  LK   +D + +   + T         V  ++ + +A       D +  +                   + ALDPR+ HL     EE   V   ++ +A  + L +  ++      T P +K            KR      E +A +  + +    +S    R+        E+  F+  P I             DPL WW+  E  FPT+A +ARR L +PA+   SER+FS AGL+I   R+ L PEN ++L++L
Sbjct:  162 YVSVTSDIWTSRVTQAYITLTVHFITNTWKMESKVLQTQEMPERHTGEHISLRLSSASQQWKIKDKIVALVRDNAANMVLASQLLD---DWDDMPCFAHTLQLAVKAGLDLPLITRVSAVCRKIVGHFKHSVRAMEALREKQKSMNISQHSLIQDVSTRWNSTYFMYERLIEQRWAIYAVIHDDNITPSDQRHLDLKPEQWELLSQLSVVLKPLQVATTALSKDQNVSSSLIYPVVNGLVKCHLKIGTDDHQMIVRFKET---------VKEELLSRFAFIP----DSVPAI-------------------SVALDPRYHHLGFFSSEEQSQVRDIISIKADALHLANSENDS-----TEPRVK------------KR-----KEDSAMSFLLGTECDNNSNQAWRD--------ELKLFQIEPQIHHDS---------DPLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFL 588          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI7.720e-22664.20Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE2.640e-19761.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.350e-12443.38Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE7.110e-9838.95Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE2.230e-8744.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE2.670e-5740.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI1_9PHAE1.090e-4541.22Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
UPI0018935EA02.000e-3028.01E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicep... [more]
UPI001E1DF3593.300e-3025.09E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenar... [more]
A0A1X7T780_AMPQE1.230e-2924.75BED-type domain-containing protein n=1 Tax=Amphime... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6179contigH-elongata_contig6179:5028..6578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.6e-91
Seed eggNOG ortholog2880.D7G5Z0
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1551
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6179.13737.1prot_H-elongata_contig6179.13737.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6179 5877..6575 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930996.8009188-UTR-H-elongata_contig6179:5027..58761622930996.8009188-UTR-H-elongata_contig6179:5027..5876Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6179 5028..5876 -
1691679655.3988981-UTR-H-elongata_contig6179:5027..58761691679655.3988981-UTR-H-elongata_contig6179:5027..5876Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6179 5028..5876 -
1622930996.8382747-UTR-H-elongata_contig6179:6575..65781622930996.8382747-UTR-H-elongata_contig6179:6575..6578Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6179 6576..6578 -
1691679655.4263306-UTR-H-elongata_contig6179:6575..65781691679655.4263306-UTR-H-elongata_contig6179:6575..6578Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6179 6576..6578 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930996.8185656-CDS-H-elongata_contig6179:5876..65751622930996.8185656-CDS-H-elongata_contig6179:5876..6575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6179 5877..6575 -
1691679655.4180746-CDS-H-elongata_contig6179:5876..65751691679655.4180746-CDS-H-elongata_contig6179:5876..6575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6179 5877..6575 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6179.13737.1

>prot_H-elongata_contig6179.13737.1 ID=prot_H-elongata_contig6179.13737.1|Name=mRNA_H-elongata_contig6179.13737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp
MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTT
TREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIG
CFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILE
ISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWK
VLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*
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mRNA from alignment at H-elongata_contig6179:5028..6578-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6179.13737.1 ID=mRNA_H-elongata_contig6179.13737.1|Name=mRNA_H-elongata_contig6179.13737.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1551bp|location=Sequence derived from alignment at H-elongata_contig6179:5028..6578- (Himanthalia elongata Himel1 dioecious)
CTCATGCTGGATGGCGAGTTCGTGGCGATTACCACTGACGACTGGACGTC TCGCAAGAACGACTCGCACATGTCGCTGACCATGACCTACATCGACTTCA AGTGGAAGCTTCACACGCTTTTCCTGGACTGCTCGAAGCACACGGGAACC ACCACGCGAGAGGACCTGGCGAAAGGTATAGCGGCAATGATCGAGCGCCA CGGCCTCACCGGTCGGGTGGTTGCATGCGTCACCGATTGCGAGCCGTCTA TAATTAAGGCGGGTTGCCTGGTTGAGGTGGGCCGGGATCTCTCGCACATC GGGTGCTTCAACCACCGCTTGGAGTCCACGACGTCATCGGTCTTCAATGG CAAGAGCTTGGGCGCTTTGAGCCTCGCCCGTGGTGTTGTTGGGCGCTACA CGAATTCGAGTCAGATGGCAGTGCGTCTCACTGCCATGTGCGGTATCCTC GAGATATCGGCGTTGTGTATGATGCAAGATGTGGAGACGCGGTGGTGGTC AACATGGGCGATGGTGAACTGTCTCCTCTACCTCATGAAGGTCATCAAGC ACCATGATTCGATAGACAATATCAACCCGCTGTTGTCAGACACGAACTGG AAGGTACTGCGGCTGATCGACTGCATTCTGGAGCCGTTCATGTTGGCGAA GAAGAAGCTCGAGGGCGCCGAGTACGTGACGGGCAGCTTGGTCATCCCAT AGGTTGCGATGATGCGGGACGGGCTCAAGGCGGCCATTGAGGACCTGGAG GACGTGTCGTCACCGGAGCTCACGGATGCCCCGCGCGAGGCGATGGTGAT CGTTTGCTCGGACGTGCAAGCGCTGTGGGCGGATTTCACCAACCGCTGGG GCGACGGCATAAACATCCTTGAATACAAGGAGGGCAAACGGCGCCAACCC CAGGGCCTTAAGCTGAGGCAAGTGTGCGCAACCGCCCTCGACCCGAGGTT CAAGCATCTCTACGGCATACTTCCGGAGGAATAGCCAGGCGTGTGGCGTG CTGTCGCCAGCGAAGCATTGGAGATGGCTCTGAGGAGCAAGTCCAGCGAA AAGGTAGCCGTCCCCGTGACAACGCCCACCATTAAGACGTCGCCGATCCC GGTCGCTGGACAGGGGGGACCGAAGCGACCTCGTTTGAACCCGCTCGAGG CCGCCGCGGCTGCCCACACCGTGAGTAGCAGTATCGCTGGGGACTCCACC GATGAGATCCGGGAGAAAATGTTTACCATCGTCGACATGGAGGTCTCCGC CTTCAAGACTGCACCTGGCATAAGGGTTTCGAAGGTGGTAGGAGGAAAGA CGGTTTACAAAGATCCTCTCGGCTGGTGGCGCACCAAGGAATAAGAATTC CCCACCCTGGCCGCACTAGCTCGTCGTGTGCTTGCCATTCCTGCCTCGCA AGCACAATCCGAGCGCATGTTTTCTACGGCAGGGCTAATCATAACGCCCA CGCGGAATAGACTACTTCCTGAGAACGTAGAGCTTCTCGTGTACTTGCGC AACGTATGGGATGTGGTAGACGGATGGAAGAAGTCTGCATCCAAGAAGCG T
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Coding sequence (CDS) from alignment at H-elongata_contig6179:5028..6578-

>mRNA_H-elongata_contig6179.13737.1 ID=mRNA_H-elongata_contig6179.13737.1|Name=mRNA_H-elongata_contig6179.13737.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig6179:5028..6578- (Himanthalia elongata Himel1 dioecious)
ATGCTGGATGGCGAGTTCGTGGCGATTACCACTGACGACTGGACGTCTCG
CAAGAACGACTCGCACATGTCGCTGACCATGACCTACATCGACTTCAAGT
GGAAGCTTCACACGCTTTTCCTGGACTGCTCGAAGCACACGGGAACCACC
ACGCGAGAGGACCTGGCGAAAGGTATAGCGGCAATGATCGAGCGCCACGG
CCTCACCGGTCGGGTGGTTGCATGCGTCACCGATTGCGAGCCGTCTATAA
TTAAGGCGGGTTGCCTGGTTGAGGTGGGCCGGGATCTCTCGCACATCGGG
TGCTTCAACCACCGCTTGGAGTCCACGACGTCATCGGTCTTCAATGGCAA
GAGCTTGGGCGCTTTGAGCCTCGCCCGTGGTGTTGTTGGGCGCTACACGA
ATTCGAGTCAGATGGCAGTGCGTCTCACTGCCATGTGCGGTATCCTCGAG
ATATCGGCGTTGTGTATGATGCAAGATGTGGAGACGCGGTGGTGGTCAAC
ATGGGCGATGGTGAACTGTCTCCTCTACCTCATGAAGGTCATCAAGCACC
ATGATTCGATAGACAATATCAACCCGCTGTTGTCAGACACGAACTGGAAG
GTACTGCGGCTGATCGACTGCATTCTGGAGCCGTTCATGTTGGCGAAGAA
GAAGCTCGAGGGCGCCGAGTACGTGACGGGCAGCTTGGTCATCCCATAGA
TGCTGGATGGCGAGTTCGTGGCGATTACCACTGACGACTGGACGTCTCGC
AAGAACGACTCGCACATGTCGCTGACCATGACCTACATCGACTTCAAGTG
GAAGCTTCACACGCTTTTCCTGGACTGCTCGAAGCACACGGGAACCACCA
CGCGAGAGGACCTGGCGAAAGGTATAGCGGCAATGATCGAGCGCCACGGC
CTCACCGGTCGGGTGGTTGCATGCGTCACCGATTGCGAGCCGTCTATAAT
TAAGGCGGGTTGCCTGGTTGAGGTGGGCCGGGATCTCTCGCACATCGGGT
GCTTCAACCACCGCTTGGAGTCCACGACGTCATCGGTCTTCAATGGCAAG
AGCTTGGGCGCTTTGAGCCTCGCCCGTGGTGTTGTTGGGCGCTACACGAA
TTCGAGTCAGATGGCAGTGCGTCTCACTGCCATGTGCGGTATCCTCGAGA
TATCGGCGTTGTGTATGATGCAAGATGTGGAGACGCGGTGGTGGTCAACA
TGGGCGATGGTGAACTGTCTCCTCTACCTCATGAAGGTCATCAAGCACCA
TGATTCGATAGACAATATCAACCCGCTGTTGTCAGACACGAACTGGAAGG
TACTGCGGCTGATCGACTGCATTCTGGAGCCGTTCATGTTGGCGAAGAAG
AAGCTCGAGGGCGCCGAGTACGTGACGGGCAGCTTGGTCATCCCATAG
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