mRNA_H-elongata_contig61759.13735.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: D7FI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI55_ECTSI) HSP 1 Score: 316 bits (810), Expect = 5.020e-102 Identity = 167/261 (63.98%), Postives = 210/261 (80.46%), Query Frame = 1
Query: 7 QLLFDIFDVDRRGIITMAELDAMLRMLYASREADPDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIKHDEDLKRATEENRAIHEDQKMRK---LGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERAVAASKTSAKLRANRAHELALGDDANSKADAWITTKQAK 780
++LF IFDVD+RG +TMAELDAM+RMLY S +ADPD+L+ LA+NGSGDEDALTFDEFL+ V++NY+V QPAF+LQ+AIRRKVLGVKYWE MT QR ++FA+YD+GD+TSVQAIEAIV QKER E ER E+ +HD +L++A EE A+HED + RK L ELR++RPADEVEEE AW AL++A+AV+ + D+TE +V DLR ARE+LWD Y+RA+ +SKT A+L+A R ELA DDANSKADAWI TKQ +
Sbjct: 125 KILFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKALAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGVKYWEKMTKQRTKMFANYDQGDLTSVQAIEAIVSAKQKERLKELERKKA---EIAAEHDRELQQAAEERIALHEDNQQRKKHKLNELRDARPADEVEEENAWIALKEARAVIKS-DYTESDVDDLRKAREVLWDSYDRAIRSSKTRARLKAERELELASKDDANSKADAWIQTKQGR 381
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S1XZZ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZZ4_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.020e-28 Identity = 78/255 (30.59%), Postives = 139/255 (54.51%), Query Frame = 1
Query: 16 FDIFDVDRRGIITMAELDAMLRMLYASREADPDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIKHDEDLKRATEENRAIHEDQKMRKLGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERAVAASKTSAKLRANRAHELALGDDANSKADAWITTKQAK 780
F IFD+D G + + E DA++RML+ + E D D++QL+ +GSG ++T DEF + + + ++QPA D+QR +R K GVKYWE T +R + FA++D + Q+I IVL K + E +R + V +E + E+ + + ++ ++ ++R+SR +E EE +AW +L+ + T +T D + + R R +W Y+ A ++ + +++ N A D +KAD ++ + K
Sbjct: 114 FSIFDIDLEGELNLHECDALMRMLFDTEETDHDLIQLIDSDGSG---SVTQDEFFAITESHPHMLQPALDMQRVLRTKFFGVKYWEKETKKRQKEFAAFDSLQNDARQSITEIVLIKYKAKQAEIQRLKDKRQRVFAMQEEAARIEAEQEQEVEKEILEERIADIRKSRVPEEEEELQAWDSLQLLHEQL-TAPYTLDEIEEKRAKRAEMWAQYDDACEKARKTIQVK-NEQRMDAAESDGKAKADDYLKSDTGK 363
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S2CHR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHR9_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.660e-23 Identity = 77/268 (28.73%), Postives = 144/268 (53.73%), Query Frame = 1
Query: 1 ILQLLFDIFDVDRRGIITMAELDAMLRMLYASREAD--------PDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIKHDEDLKRATEENRAIHEDQKMRKLGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERAVAASKTSAKLRANRAHELALGDDANSKADAWITTKQAK 780
I +L FDIFD+D++G + +AE DA+LRM+Y D +I++L+ +NG G+ +T DEF +++ + ++QPA DLQRA+R+++LGVK+W+ +T R ++FA+ D S+++++ I++ QKER + + + + E H + QK R++ +L +E E+ A +R+ + ++ FT D + + R ARE L+ + AS + +R +A+E + + D ++ +K +
Sbjct: 113 ITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLASNSIESMKEILVIKQKERESRQHQEEEALSEEEQAHILXXXXXXXXXXXEKQYQKKRRVQKLNAQITEEEKAEKLALAEVRECRLMLEE-PFTFDQLSERRQAREALYSAANKLKDASLAALNVR--QANERKNSIEVDRSVDLFLQSKAGR 374
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S2G1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1T6_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.450e-23 Identity = 76/262 (29.01%), Postives = 141/262 (53.82%), Query Frame = 1
Query: 1 ILQLLFDIFDVDRRGIITMAELDAMLRMLYASREAD--------PDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIKHDEDLKRATEENRAIHEDQKMRKLGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERAVAASKTSAKLRANRAHELALGDDANSKADAWI 762
I +L FDIFD+D++G + +AE DA+LRM+Y D +I++L+ +NG G+ +T DEF +++ + ++QPA DLQRA+R+++LGVK+W+ +T R ++FA+ D S+++++ I++ QKER + + + + E H + QK R++ +L +E E+ A +R+ + ++ FT D + + R ARE L+ + AS + +R +A+E + + D ++
Sbjct: 113 ITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLASNSIESMKEILVIKQKERESRQHQEEEALSEEEQAHILXXXXXXXXXXXEKQYQKKRRVQKLNAQITEEEKAEKLALAEVRECRLMLEE-PFTFDQLSERRQAREALYSAANKLKDASLAALNVR--QANERKNSIEVDRSVDLFL 368
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: F0YJ91_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ91_AURAN) HSP 1 Score: 104 bits (259), Expect = 1.150e-21 Identity = 56/143 (39.16%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 1 ILQLLFDIFDVDRRGIITMAELDAMLRMLYASREADPDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIK 429
I +L ++IFDVDR G I MAE DAMLRM+Y ++DP+IL+ + +N G+ ++ +E ++++ + ++ PAFDLQR +R ++LGVKYWE + +R F+ YD G S ++++ I+ + R +E+ERN + ++E+ I+
Sbjct: 30 IAKLAYNIFDVDREGKIDMAEADAMLRMVYNVPKSDPEILEKMDVNKDGN---ISLEELEQLIEVHNYILMPAFDLQRMLRIRILGVKYWEAESQRRRVYFSGYDAGAQESWESLKKILEIKHQARVEEEERN-RNLKEMEIR 168
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A8J2SZ55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ55_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.870e-21 Identity = 79/249 (31.73%), Postives = 125/249 (50.20%), Query Frame = 1
Query: 61 ELDAMLRMLYASREADPDILQLLAINGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIR-----------EVTIKHDEDLKRATEENRAIHEDQKMRKLGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERAVAASKTSAKLRANRAHELALGDDANSKADAWITTKQ 774
E DAMLRM+YASR+ADP +L + ING G+ ++ +E + V+E+ V+ PAF LQR +R+++LGV+YWE T +R FA YD G TS AI I+ +ER +E+ER + + +K E++ A + + + E+R +R A E E E A R + + + D L + RE W +E + + +++ ++ LA+G D K D I T +
Sbjct: 162 EADAMLRMVYASRKADPLLLTQIDINGDGE---VSMEELQQTVEEDNSVLAPAFQLQRMLRQRILGVRYWEQETLRRQTYFAGYDSGTTTSWDAIRDILAIKHRERLEEEERQRRLKEXXXXXXXXXXLQKELKFKEEM--AARKAKRXXXXXXXLETPEIRAAREARE--ELEKCSAERDEECIYA------DLARRLDL-RERYWTAFETWIRCQRVVEQMKCDKKLRLAVGPDVQIKVDEDIVTAE 396
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S3UVV0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVV0_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 1.740e-19 Identity = 73/232 (31.47%), Postives = 116/232 (50.00%), Query Frame = 1
Query: 7 QLLFDIFDVDRRGIITMAELDAMLRMLYASREADPDILQLLAINGSGDEDA------------LTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDKGDMTSVQAIEAIVLENQKERADEKERNTKTIREVTIKHDEDLKRATEENRAIHEDQKMRKLGELRESRPADEVEEEEAWKALRQAQAVVSTGDFTEDNVHDLRIAREILWDCYERA 666
+L FDIFDVD+ G + + E DA+LRM++ + D + L I D +A ++F++F++ ++ ++QPA DLQ A+R+K LGVKYWE T +RAE+FA +D G S +AI I+ + +K + D D +R + + + RKL LR +R E E+ A L +AQA + D+ + R R LW+ + +A
Sbjct: 113 KLAFDIFDVDKIGQLELCECDALLRMMWNPKNEMADPVLLGRIEEFADAEAEDTAKDAYKEKVISFEKFVEAIERYESIIQPALDLQHAMRKKFLGVKYWETKTQRRAEMFAEFDAGH-DSWEAINEILAKKRKXXXXXXXXXXXXXXXXXAERDLDFQREMAAHHRDRQAARKRKLQALRGARAEAEGREDRALAKLGEAQARLEL-DYAPAELGQRRKWRAHLWEAFAKA 342
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S2SD95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD95_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.180e-16 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 ILQLLFDIFDVDRRGIITMAELDAMLRMLYASR-----EADPDILQLLA---INGSGDEDALTFDEFLKVVKENYQVVQPAFDLQRAIRRKVLGVKYWE 273
I +L FDIFDVDR+G + + E DA+LRM+Y E PD QLL +NG G+ +T DEF +++ + ++ PAFDLQRA+R+++LG+KYWE
Sbjct: 128 ITKLAFDIFDVDRKGRLDICECDALLRMVYDVEDLEEIEGPPDGKQLLKEIDVNGDGE---VTIDEFSDLMETHQYILSPAFDLQRALRQRLLGIKYWE 223
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Match: A0A7S2LD98_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LD98_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.900e-8 Identity = 33/99 (33.33%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 49 ITMAELDAMLRMLYASREADPDILQLLAINGSGDEDA-------LTFDEF--LKVVKENYQVVQPAFDLQRAIRRKVLGVKYWENMTCQRAEVFASYDK 318
+ + E DA++RM++++ ADP ++++++ ++D ++ D+F L +V ENY ++ PAF+ QR IR K LG+K WE ++ +R + S DK
Sbjct: 1 LLIEECDALIRMVHSTSSADPKLMEIISSQCISEQDQYFRTLWHISEDKFEQLVIVGENY-LLCPAFEFQREIREKTLGIKCWERISGRRRSICNSDDK 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61759.13735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61759.13735.1 >prot_H-elongata_contig61759.13735.1 ID=prot_H-elongata_contig61759.13735.1|Name=mRNA_H-elongata_contig61759.13735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp ILQLLFDIFDVDRRGIITMAELDAMLRMLYASREADPDILQLLAINGSGDback to top mRNA from alignment at H-elongata_contig61759:317..3143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61759.13735.1 ID=mRNA_H-elongata_contig61759.13735.1|Name=mRNA_H-elongata_contig61759.13735.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2827bp|location=Sequence derived from alignment at H-elongata_contig61759:317..3143+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61759:317..3143+ >mRNA_H-elongata_contig61759.13735.1 ID=mRNA_H-elongata_contig61759.13735.1|Name=mRNA_H-elongata_contig61759.13735.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1566bp|location=Sequence derived from alignment at H-elongata_contig61759:317..3143+ (Himanthalia elongata Himel1 dioecious)back to top |