mRNA_H-elongata_contig6147.13700.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6147.13700.1
Unique NamemRNA_H-elongata_contig6147.13700.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A6H5JRW8_9PHAE (3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRW8_9PHAE)

HSP 1 Score: 707 bits (1826), Expect = 3.730e-243
Identity = 392/652 (60.12%), Postives = 460/652 (70.55%), Query Frame = 2
Query:  434 DCLPIFRFMRAGLTVDEYRPHGDAAYEEELQKRVEAALSLSRPRDTTILKSIWAPAAAGGAYQEEMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLCRE-LTEGELCATIDLGARGFGERQRGRRG---RTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVVHRRQVEDWGRVVIEAKRKAGKSDV----AAPPLPGVDW---TSGGGPVTIGDDWWATARSLRQPLAMRTSGQFYGALERGWDKLVAVLFHGIWTPESQHAVSILESLASRQQH-----------------HQERSQKYLEASPMTANARCRASTASRSVLGETLVRAPTERSGKWMAAVRRAPVERMSVVLAEADVTSLIDVADRQAISRLPSMHVHLGGREIARFPVDRDETAESLEAKIAEIAASACGQG 2305
            DCLP FRF R GL  DEY  HGD  +EEEL KRVEAALSLSRP DT+ LK +W+P A GG Y++EMAVATY VQ+AS VARELQGELC+ + ISK DSSPVTVADF+VQA+VLGVL +YFP HGFIAEE+SSVLR+D  S   V  VV   L R+ L E +LCA IDLG RG G+ +RGRRG   RTWVLDPIDGTKGFLRGEQFCVALGLLD GKAVAGVLGCPNLP     +  +        RGLLYTAA+GEG+FVR +S+GA+++RR+ VD AR+  + RVLESVE GH+SH VAA+V  DLGI   PIRVDGQCKYGLLS+GQGGIYLRLPRWGYVENIWDH AG+V+ +EAGGKVTD+RGEPLDFSLG KLPREVVG+VA+ G +H++V+R V  RQ+EDW RVV  A+ K+ +S+     AAP LPGV+W       G  ++G+ W ATA S R+PL MRTS QFYG L R W KLVAVLFHG  T  SQHAV ILESLA  QQ                   Q R +  L  +   +  R +      SV       A T  +G           ER+ V+LAEA+V SLI+VADRQAI RLPS+H+HLGGREI R PV+  ET ESL  +I ++A   C  G
Sbjct:  132 DCLPAFRFERGGLAFDEYHTHGDVPFEEELAKRVEAALSLSRPEDTSTLKELWSPDAEGGDYRDEMAVATYVVQIASHVARELQGELCKAEAISKTDSSPVTVADFTVQALVLGVLSRYFPGHGFIAEESSSVLRQDPESLSHVLSVVRTVLGRQGLAEADLCAAIDLGTRGHGKNKRGRRGKGGRTWVLDPIDGTKGFLRGEQFCVALGLLDGGKAVAGVLGCPNLPCHKHPSEFSGWAQGGEARGLLYTAALGEGTFVRGISAGADDSRRVFVDHARKPCDTRVLESVEAGHTSHAVAAQVCNDLGITLPPIRVDGQCKYGLLSEGQGGIYLRLPRWGYVENIWDHCAGSVVIREAGGKVTDTRGEPLDFSLGTKLPREVVGVVASCGRVHSDVLRAVDNRQLEDWARVVARAETKSRESEPPPGSAAPSLPGVEWMPLNDDIGGSSVGEAWQATALSQRRPLVMRTSDQFYGTLARNWHKLVAVLFHG-GTSYSQHAVGILESLALLQQEPPKSQXXXXXXXXXXXXEQRRHRSGLSGAKPPSPPRAQPDLERESVA------AATTTTGTIQPEAEEPRAERVPVLLAEANVMSLIEVADRQAIGRLPSLHLHLGGREILRIPVNFGETVESLGKRIDKVAVKVCQAG 776          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A7S3AAM8_9RHOD (3'(2'),5'-bisphosphate nucleotidase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAM8_9RHOD)

HSP 1 Score: 264 bits (674), Expect = 9.550e-78
Identity = 155/338 (45.86%), Postives = 207/338 (61.24%), Query Frame = 2
Query:  617 YQEEMAVATYAVQVASTVARELQGELCRKD-TISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLCRE--LTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVV 1621
            Y++ +  A   V+VAS++++ +Q    ++  T+SK+D+SPVTVADF+VQA++L  LD       FIAEETS+ L+E+    + V   V+  L     L+E ++C  IDLG+   G+        TWVLDP+DGTKGF+R EQ+C+ALGLLD GK V GVLGCPNLP   D              G ++ A  G G+F   +  G +  R+I V      S  R +ESVE  HSS   +A+V+  LG+   P+R+D QCKYG L++G G IY+R PR GY ENIWDH AG+++ +EAGG VTD  G PLDF LG K+  E  GIVATNG  H  VI  V
Sbjct:    3 YEDFLQRAISVVRVASSMSKTVQKRFRQETGTLSKMDTSPVTVADFAVQALILSELDD--GTFKFIAEETSAQLKENSELLKDVTDTVNSALPGRPALSENQICGAIDLGSYAGGDSLL-----TWVLDPVDGTKGFMRMEQYCIALGLLDRGKVVLGVLGCPNLPFDAD------------ETGCIFYAQSGSGAFCVSVD-GTHTPRQIKVSAREDVSTCRFMESVESAHSSFEQSAKVASILGVKEPPLRMDSQCKYGALARGDGQIYMRFPRAGYEENIWDHAAGSIVIEEAGGTVTDGIGHPLDFGLGRKMKNEG-GIVATNGVFHEAVICAV 319          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A4D9D727_9STRA (3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D727_9STRA)

HSP 1 Score: 261 bits (667), Expect = 7.570e-76
Identity = 158/349 (45.27%), Postives = 214/349 (61.32%), Query Frame = 2
Query:  620 QEEMAVATYAVQVASTVARELQGELC--RKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAV----RVVVSKTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPL-SSGANEARRIT------VDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGA-----KLPREVVGIVATNGNIHAEVI 1612
            Q+E+ VA    + A   A+ LQ  L   ++  I K DSSPVT+AD++VQA+V+  L   FP    +AEETS VLR+D  +  AV    R+   +T    +TE  LC  +D G      R  G R  TW+LDPIDGTKGF+RGE FCVALG+  EGK V GVL CPN+P++T     + +  A+   G ++ A  G+G+F+ PL ++G++ A  IT      V  A    E R  ESVE  HSSH+V A  +  LG+ + P+++D QCKYGLL++G+G + LRLPR GY+ENIWDH    V+  EAGG+VTD+ G+ LDF+ G      K+ REV GIV TNG +H  V+
Sbjct:   46 QDELTVAISTARKAGIAAKRLQKTLIETKRAAIEKSDSSPVTIADYTVQALVIAALRVSFPGDQVVAEETSGVLRQDPVALAAVMDVFRLESGETY---VTEESLCEILDHG------RLPGPR--TWILDPIDGTKGFIRGEHFCVALGMALEGKPVLGVLACPNVPSST-----SRSNGASLGDGCVFFALKGQGAFMLPLEANGSSLAEEITHAVPIRVSPATAGEEARFFESVETAHSSHSVGAEAARALGVLTPPVQMDSQCKYGLLARGEGEVMLRLPRLGYIENIWDHAPAYVVITEAGGRVTDTEGKELDFAEGCRSGTGKMGREVTGIVTTNGRLHDLVV 378          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A7J7IPA1_9RHOD (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPA1_9RHOD)

HSP 1 Score: 258 bits (659), Expect = 5.430e-75
Identity = 164/366 (44.81%), Postives = 223/366 (60.93%), Query Frame = 2
Query:  605 AGGAYQEEMAVATYAVQVASTVARELQGELCRKD-------TISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDA----AYHTHA-------TVATSHRGLLYTAAIGEGSFVRPLSSGANEA--RRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVVHRRQVED 1642
            AG   Q E+  A   V  AS +ARE+Q   C          T++K D+SPVT+AD +VQA++LG L   FP+  F+AEETSS ++++ R   A+R  +++   R + E  +  +IDLG+   G      RGR WVLDP+DGTKGFLR +QFC+AL LL +G A  GVLGCPNL AA +A    + +T         T+     G ++ AA G G++++ L+    +A  ++I V+     S   + ESVE GHSSH++  ++   LGI    + VD QCKYGLLS+G+  ++LR PR GYVENIWDH AGTV+  EAGG+VTD+ G  LDFS G KLP  V GIVATNG++H  V+  V     ED
Sbjct:    7 AGHRLQHELESAVDIVSRASRMAREIQKRYCDATQTVGDATTLAKADASPVTIADLAVQALILGELHMLFPEDRFVAEETSSSVQDE-RMEGAIRTWLTQYSTRGVDE-RVRDSIDLGSDAGG-----CRGRIWVLDPVDGTKGFLRNQQFCIALALLVDGLAELGVLGCPNLSAAQEAERIASGYTEGIEGEKCLTIVNGTDGCVFFAARGAGAYMQSLTDRREQALPQQIHVNANTDPSWAVMAESVESGHSSHSLTGKMIRILGIRQR-LGVDSQCKYGLLSRGEACVFLRFPRPGYVENIWDHAAGTVVLTEAGGRVTDALGGELDFSHGRKLPN-VRGIVATNGHMHPAVLAAVKHVLAED 363          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A3R7QLT3_9PROT (3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Bacteria TaxID=2 RepID=A0A3R7QLT3_9PROT)

HSP 1 Score: 253 bits (646), Expect = 1.360e-73
Identity = 149/337 (44.21%), Postives = 199/337 (59.05%), Query Frame = 2
Query:  617 YQEEMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLRE-DLRSFEAVRVVVSKTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLP-RWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVV 1621
            Y+ E  +A  AV  AS + +E+Q EL    ++SK D SPVTVADF  QA+V   L +  PD   + EE +  LRE +        V  ++     L+E E+   ID G       + G  GR W LDPIDGTKGFLR +Q+ VAL L+++G+ V G LGCPNLP   D             RG L+ +  G+GSF+R L  G  E + I V   +RASE  + ESVE  HSS +  ARV+E LG+ + P R+D QCKY  +++G   IYLRLP R  Y E IWDH AG+++  EAGG++TD  G+PLDFS+G  L R+  G+V TNG++H EV+  V
Sbjct:    3 YELERRIAVEAVARASRLCQEVQRELVAGSSLSKDDKSPVTVADFGAQAVVSHTLAEALPDVPLVGEEDARALREPENEELRGKVVAAAQRGLAGLSEAEVLDLIDRGTY-----EGGGSGRHWTLDPIDGTKGFLRLDQYAVALALIEDGELVLGALGCPNLPVRADEP--------DGARGCLFISIRGQGSFMRSLDGG--EEKAIHVSDIQRASEASLCESVEAAHSSQSDTARVAEVLGLTAPPFRIDSQCKYAAVARGDASIYLRLPTRKDYEEKIWDHAAGSMVVSEAGGRITDVDGKPLDFSIGRTL-RDNTGVVVTNGHVHDEVVAAV 323          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: M1VL83_CYAM1 (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VL83_CYAM1)

HSP 1 Score: 254 bits (649), Expect = 1.500e-73
Identity = 162/365 (44.38%), Postives = 213/365 (58.36%), Query Frame = 2
Query:  608 GGAYQEEMAVATYAVQVASTVARELQGELC-------RKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDA-----------AYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEA--RRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVVHRRQVED 1642
            G   + E+  A   V  AS +ARE+Q   C       +  T++K D+SPVT+AD +VQA++LG L   FP   F+AEETS  +R D      +R  +++   R   E  + A+IDLGA   G +     GR WVLDP+DGTKGFLR +QFC+AL LL +G A  GVLGCPNL AA +A           A     T+     G ++ AA G G+F++ L     +A  R+I V+G    S   + ESVE GHSSHT+  ++   LGI    + VD QCKYGLLS+G+  ++LR PR  YVENIWDH AG V+ +EAGG VTD+ G  LDFS G KL   V GIVATNG++H  V+  V     E+
Sbjct:    8 GHRLRHELECAVDVVGRASRMAREIQRHYCDAGASTNQATTVAKADASPVTIADLAVQALILGELHAVFPQDRFVAEETSGSIR-DAAMEHGIRSWLAQH-ARHGVEERVRASIDLGADAGGAQ-----GRIWVLDPVDGTKGFLRNQQFCIALALLVDGSAELGVLGCPNLSAAQEAERVVSTYTQGAADEKCLTIVNGPDGCVFFAARGAGAFMKSLVQDPGQALPRQIHVNGNADPSWAIMAESVERGHSSHTLTGKIIRILGIRQR-LGVDSQCKYGLLSRGEACVFLRFPRVDYVENIWDHAAGAVVLKEAGGLVTDAFGNELDFSRGRKL-LNVRGIVATNGHMHPAVLAAVRHVLAEE 363          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A3M1DCX5_9DELT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1DCX5_9DELT)

HSP 1 Score: 251 bits (641), Expect = 7.360e-73
Identity = 155/334 (46.41%), Postives = 196/334 (58.68%), Query Frame = 2
Query:  626 EMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVS-KTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLP-RWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVV 1621
            E A+A  AV  AS V +E+Q  L    T+ K D SPVTVADF+ QAIV  +L   FPD   + EE ++ LRE   +  A +VV S + +  +L   E+ A ID G    G       GR W LDPIDGTKGFLR +Q+ VAL L+++G+ V GVLGCPNLP   DAA    A      RG ++TA  G+G+  R L         +TV      +  R  ESVE  HS+ + +ARV+E LGI + P R+D QCKY  +++G   +YLRLP R GYVE IWDH AG  +  EAGG VTD RGEPLDFSLG  L     G++ TNG  H EV+  V
Sbjct:    9 ERAIAQQAVLAASRVCQEVQQRLVAGSTLQKGDKSPVTVADFAAQAIVSHMLAGEFPDLPMVGEEDAAALREPANADLAAQVVSSVQAVLPDLAADEVFAAIDRGTWAGGPT-----GRHWTLDPIDGTKGFLRLDQYAVALALIEDGEVVLGVLGCPNLP--VDAADPDGA------RGCIFTAVRGQGATSRSLDDATETP--VTVSTLSDVTRARFCESVEKAHSNQSHSARVAELLGITAPPFRIDSQCKYAAVARGDAEVYLRLPTRPGYVEKIWDHAAGVAVVTEAGGTVTDVRGEPLDFSLGRTLEANK-GVIVTNGRFHDEVVSAV 326          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: M2Y5I2_GALSU (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5I2_GALSU)

HSP 1 Score: 251 bits (641), Expect = 8.320e-73
Identity = 140/325 (43.08%), Postives = 207/325 (63.69%), Query Frame = 2
Query:  581 KSIWAPAAAGGAYQEEMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLC--RELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHR-GLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLG 1546
            KS++AP+     +  E  VA  A+ +A  ++ +LQ  L ++  I+K D+SPV++ADF+VQA+V+  + + FP+  FIAEE S+ LR+D +  + V   V+  L    +LT+ E+C  +DLG R  G  +R     TW+LDPIDGTKGFLRG+Q+C+AL LL +G    G+LGCPNLP A+            SH+ G ++ AA G G+FV+ +  GA E+  I V      +     ES EPGHSSH ++  +++ LG+++  +R+D QCKYG++++G+  IY R P+ GY EN+WDH AG++I +EAGG VTD  G+ LDFS G
Sbjct:   25 KSLYAPS-----WLAERQVAICALCLACKLSSKLQKRLVQESVITKSDNSPVSIADFAVQALVIHWITRAFPNDHFIAEEDSTALRKDEKLLKDVTDAVNSVLSIDEQLTDSEVCDLLDLGNRHMGTNER-----TWLLDPIDGTKGFLRGDQYCIALALLKDGAIRVGILGCPNLPLAS--------VPPNSHKVGCIFHAAQGVGAFVQEIERGA-ESYPIRVSDVSDPAWATFCESWEPGHSSHELSLEIAKILGVNNPSVRMDSQCKYGVVARGEASIYFRFPKEGYQENVWDHAAGSIIIREAGGMVTDGFGQVLDFSKG 330          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A2D7I2V5_9DELT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I2V5_9DELT)

HSP 1 Score: 250 bits (639), Expect = 1.380e-72
Identity = 152/339 (44.84%), Postives = 200/339 (59.00%), Query Frame = 2
Query:  617 YQEEMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVVVS-KTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLP-RWGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVIRVVHR 1627
            Y  E  +A  AV+ AS + R +Q EL    ++SK D SPVTVADF  QA+V   L    PD   + EE ++ LR+      A +VV + +    EL + E+   ID G       + G  GR W LDPIDGTKGFLR +Q+ VAL L+++G+ V G LGCPNL    DAA           RG L+ A  GEGSF+RPL  G  + + I V    R ++  + ESVE GHSS +  ARV+E LGI S P R+D QCKY  +++G   IYLRLP R  Y E IWDH  G+++  EAGG+++D  G+PLDFSLG  L R   G+V TNG++H EV+  V +
Sbjct:    3 YSIERRLAVEAVERASRLCRRVQQELVSGSSLSKDDKSPVTVADFGAQAVVSHCLATALPDVPLVGEEDAAALRQPENEGLAAKVVSAVQESVPELEKAEILNLIDRGTF-----EGGASGRHWTLDPIDGTKGFLRLDQYAVALALIEDGELVMGALGCPNL--LVDAAQPE------GPRGCLFIAVKGEGSFMRPLDGG--DEQPIHVTDIDRGADANLCESVEAGHSSQSDTARVAEMLGISSPPFRIDSQCKYAAVARGDASIYLRLPTRKDYEEKIWDHAGGSMVVSEAGGRISDVDGQPLDFSLGRTL-RNNTGVVVTNGHVHDEVVAAVKK 325          
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Match: A0A3D1TG71_9BACT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3D1TG71_9BACT)

HSP 1 Score: 250 bits (638), Expect = 1.760e-72
Identity = 149/334 (44.61%), Postives = 198/334 (59.28%), Query Frame = 2
Query:  617 YQEEMAVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVLDQYFPDHGFIAEETSSVLREDLRSFEAVRVV-VSKTLCRELTEGELCATIDLGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAGVLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEARRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQCKYGLLSQGQGGIYLRLPR-WGYVENIWDHVAGTVITQEAGGKVTDSRGEPLDFSLGAKLPREVVGIVATNGNIHAEVI 1612
            Y++E A+A +AV  A  +   +Q  L  K+T++K D SPVTVADF  QA++  +L + FP+   + EE +S LRE        RVV   + +  +LT  ++   ID      G+   G +GR WVLDP+DGTKGFLR EQ+ VALGL+++GK V GVLGCPNLP   D      A +     G ++ A  G G+  R +  G+ E   +  D       VRV ESVE GHSSH  + ++ E LGI   P R+D QCKY  +++G    YLRLP   GY E IWDH AG+++ +EAGG VTD RG PLDFSLG  L RE  G++ TNG IH  V+
Sbjct:    3 YEKERAIAVHAVLEACRLCVRVQAGLVSKETLAKKDRSPVTVADFGAQALINHILHEEFPEIPMVGEEDASRLREPEHRAVLDRVVGFVQEIRSDLTSEKVLDAID-----GGKHPGGSQGRHWVLDPVDGTKGFLRNEQYAVALGLIEDGKVVLGVLGCPNLPVDLD---DPEAGI-----GCIFIAVRGGGAVQRRI--GSEEETPVKTDHLHDLRSVRVCESVESGHSSHNDSTKIMELLGIRREPYRIDSQCKYAAVARGDVSAYLRLPTGMGYEERIWDHAAGSIVVEEAGGMVTDLRGRPLDFSLGRTL-RENRGVIVTNGRIHEHVL 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6147.13700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRW8_9PHAE3.730e-24360.123'(2'),5'-bisphosphate nucleotidase n=2 Tax=Ectoca... [more]
A0A7S3AAM8_9RHOD9.550e-7845.863'(2'),5'-bisphosphate nucleotidase n=4 Tax=Rhodos... [more]
A0A4D9D727_9STRA7.570e-7645.273'(2'),5'-bisphosphate nucleotidase n=2 Tax=Monodo... [more]
A0A7J7IPA1_9RHOD5.430e-7544.813'(2'),5'-bisphosphate nucleotidase n=1 Tax=Cyanid... [more]
A0A3R7QLT3_9PROT1.360e-7344.213'(2'),5'-bisphosphate nucleotidase n=2 Tax=Bacter... [more]
M1VL83_CYAM11.500e-7344.383'(2'),5'-bisphosphate nucleotidase n=1 Tax=Cyanid... [more]
A0A3M1DCX5_9DELT7.360e-7346.413'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltap... [more]
M2Y5I2_GALSU8.320e-7343.083'(2'),5'-bisphosphate nucleotidase n=1 Tax=Galdie... [more]
A0A2D7I2V5_9DELT1.380e-7244.843'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltap... [more]
A0A3D1TG71_9BACT1.760e-7244.613'(2'),5'-bisphosphate nucleotidase n=1 Tax=Verruc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6147contigH-elongata_contig6147:2..6264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score594.7
Seed ortholog evalue5.9e-167
Seed eggNOG ortholog2880.D7FJF3
KEGG rclassRC00078
KEGG koko:K01082,ko:K15422,ko:K21398
KEGG TC2.A.55.2.1,2.A.55.2.2
KEGG ReactionR00188,R00508,R03393,R03427
KEGG Pathwayko00562,ko00920,ko01100,ko01120,ko01130,ko04070,ko04142,ko04216,ko04978,map00562,map00920,map01100,map01120,map01130,map04070,map04142,map04216,map04978
KEGG ModuleM00131
EggNOG free text desc.3'(2'),5'-bisphosphate nucleotidase activity
EggNOG OGsCOG1218@1,KOG1528@2759
EC3.1.3.57,3.1.3.7
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03016
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionInositol monophosphatase
Ec32 orthologEc-14_006130.1
Exons12
Model size2503
Cds size2277
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6147.13700.1prot_H-elongata_contig6147.13700.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6147 197..6233 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930992.0698814-UTR-H-elongata_contig6147:1..1961622930992.0698814-UTR-H-elongata_contig6147:1..196Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6147 2..196 -
1691679653.66079-UTR-H-elongata_contig6147:1..1961691679653.66079-UTR-H-elongata_contig6147:1..196Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6147 2..196 -
1622930992.2997851-UTR-H-elongata_contig6147:6233..62641622930992.2997851-UTR-H-elongata_contig6147:6233..6264Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6147 6234..6264 -
1691679653.8037822-UTR-H-elongata_contig6147:6233..62641691679653.8037822-UTR-H-elongata_contig6147:6233..6264Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6147 6234..6264 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930992.083654-CDS-H-elongata_contig6147:196..6681622930992.083654-CDS-H-elongata_contig6147:196..668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 197..668 -
1691679653.6725929-CDS-H-elongata_contig6147:196..6681691679653.6725929-CDS-H-elongata_contig6147:196..668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 197..668 -
1622930992.0986793-CDS-H-elongata_contig6147:1041..12271622930992.0986793-CDS-H-elongata_contig6147:1041..1227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1042..1227 -
1691679653.690491-CDS-H-elongata_contig6147:1041..12271691679653.690491-CDS-H-elongata_contig6147:1041..1227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1042..1227 -
1622930992.1162953-CDS-H-elongata_contig6147:1437..15231622930992.1162953-CDS-H-elongata_contig6147:1437..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1438..1523 -
1691679653.7067444-CDS-H-elongata_contig6147:1437..15231691679653.7067444-CDS-H-elongata_contig6147:1437..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1438..1523 -
1622930992.135274-CDS-H-elongata_contig6147:1807..18821622930992.135274-CDS-H-elongata_contig6147:1807..1882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1808..1882 -
1691679653.717212-CDS-H-elongata_contig6147:1807..18821691679653.717212-CDS-H-elongata_contig6147:1807..1882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 1808..1882 -
1622930992.1535993-CDS-H-elongata_contig6147:2175..22561622930992.1535993-CDS-H-elongata_contig6147:2175..2256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 2176..2256 -
1691679653.7286708-CDS-H-elongata_contig6147:2175..22561691679653.7286708-CDS-H-elongata_contig6147:2175..2256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 2176..2256 -
1622930992.1711109-CDS-H-elongata_contig6147:2470..27641622930992.1711109-CDS-H-elongata_contig6147:2470..2764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 2471..2764 -
1691679653.7372468-CDS-H-elongata_contig6147:2470..27641691679653.7372468-CDS-H-elongata_contig6147:2470..2764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 2471..2764 -
1622930992.193122-CDS-H-elongata_contig6147:3139..32051622930992.193122-CDS-H-elongata_contig6147:3139..3205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 3140..3205 -
1691679653.748151-CDS-H-elongata_contig6147:3139..32051691679653.748151-CDS-H-elongata_contig6147:3139..3205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 3140..3205 -
1622930992.2144089-CDS-H-elongata_contig6147:3665..39991622930992.2144089-CDS-H-elongata_contig6147:3665..3999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 3666..3999 -
1691679653.756291-CDS-H-elongata_contig6147:3665..39991691679653.756291-CDS-H-elongata_contig6147:3665..3999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 3666..3999 -
1622930992.2291331-CDS-H-elongata_contig6147:4386..45281622930992.2291331-CDS-H-elongata_contig6147:4386..4528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 4387..4528 -
1691679653.7641973-CDS-H-elongata_contig6147:4386..45281691679653.7641973-CDS-H-elongata_contig6147:4386..4528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 4387..4528 -
1622930992.245954-CDS-H-elongata_contig6147:5093..53771622930992.245954-CDS-H-elongata_contig6147:5093..5377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 5094..5377 -
1691679653.7721121-CDS-H-elongata_contig6147:5093..53771691679653.7721121-CDS-H-elongata_contig6147:5093..5377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 5094..5377 -
1622930992.2651546-CDS-H-elongata_contig6147:5682..57841622930992.2651546-CDS-H-elongata_contig6147:5682..5784Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 5683..5784 -
1691679653.7805648-CDS-H-elongata_contig6147:5682..57841691679653.7805648-CDS-H-elongata_contig6147:5682..5784Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 5683..5784 -
1622930992.2807486-CDS-H-elongata_contig6147:6078..62331622930992.2807486-CDS-H-elongata_contig6147:6078..6233Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 6079..6233 -
1691679653.7900991-CDS-H-elongata_contig6147:6078..62331691679653.7900991-CDS-H-elongata_contig6147:6078..6233Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6147 6079..6233 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6147.13700.1

>prot_H-elongata_contig6147.13700.1 ID=prot_H-elongata_contig6147.13700.1|Name=mRNA_H-elongata_contig6147.13700.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=759bp
MPRPSVLATGLVCSTFGLICVAPSSAKVVCSSVGFCASPLRLTPSSDKRR
LSNMKWRSRMNMSATPQTELLLLARLGRGDEIVRDRLQVLLTEFAVKYGE
RITAQLEDAEEKEGGSQPPLNGDDLPLPDSDTIGDCLPIFRFMRAGLTVD
EYRPHGDAAYEEELQKRVEAALSLSRPRDTTILKSIWAPAAAGGAYQEEM
AVATYAVQVASTVARELQGELCRKDTISKIDSSPVTVADFSVQAIVLGVL
DQYFPDHGFIAEETSSVLREDLRSFEAVRVVVSKTLCRELTEGELCATID
LGARGFGERQRGRRGRTWVLDPIDGTKGFLRGEQFCVALGLLDEGKAVAG
VLGCPNLPAATDAAYHTHATVATSHRGLLYTAAIGEGSFVRPLSSGANEA
RRITVDGARRASEVRVLESVEPGHSSHTVAARVSEDLGIDSLPIRVDGQC
KYGLLSQGQGGIYLRLPRWGYVENIWDHVAGTVITQEAGGKVTDSRGEPL
DFSLGAKLPREVVGIVATNGNIHAEVIRVVHRRQVEDWGRVVIEAKRKAG
KSDVAAPPLPGVDWTSGGGPVTIGDDWWATARSLRQPLAMRTSGQFYGAL
ERGWDKLVAVLFHGIWTPESQHAVSILESLASRQQHHQERSQKYLEASPM
TANARCRASTASRSVLGETLVRAPTERSGKWMAAVRRAPVERMSVVLAEA
DVTSLIDVADRQAISRLPSMHVHLGGREIARFPVDRDETAESLEAKIAEI
AASACGQG*
back to top

mRNA from alignment at H-elongata_contig6147:2..6264-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6147.13700.1 ID=mRNA_H-elongata_contig6147.13700.1|Name=mRNA_H-elongata_contig6147.13700.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6263bp|location=Sequence derived from alignment at H-elongata_contig6147:2..6264- (Himanthalia elongata Himel1 dioecious)
GTTGCGCTTTGTACACCGAACAGCAAGGGCGATGCCTCGTCCAAGTGTGC TTGCAACTGGCCTCGTGTGCAGTACATTCGGTCTGATATGTGTGGCACCA AGCAGTGCAAAGGTGGTGTGTTCTTCGGTTGGATTCTGCGCCTCCCCGCT GAGGTTGACACCTTCGTCAGACAAGAGGAGACTCAGGTGACTGCGCCAGG ATGAACATTTTTTTATTGATTGAAATATCAGTATTCCAAGCATCCACGCC TTCTTTCATGTAACCACAGTGAACATCCGGATGGCCTATGATATTACAGC CCAAGTATAATATGATCTCCGCTTTAGCTGAGCATTGATGTAAATTGGCA ACCCTTATTTTGTCCCAAGAGACTGGAGCTCTGTAACGGTATCGAATGAG GGGTGGCACTGATTTCTGTGTCAACCGCGGCTGCCTTCTTCCTGTTCCAA ACTGCCTGCATTCGACATCCCAATCACAAGCAATATGAAATGGAGGTCAA GGATGAATATGTCCGCGACGCCGCAGACCGAGCTGTTGCTACTCGCCCGA CTTGGACGGGGTGACGAGATTGTACGAGATAGGTGAGACCACCACATAGA GCTTGGAAATGTTGCGGTCGTTTCCTCGACTTGGACGAGCTTCCATGTTT TGTTATTCCGGCGGCTTCTCTGACGAACCATGATTTATGCTGAAGAGCGT CATCCAAGCGGGATTAGGCCGGCCCCATTGAGCACCAAACTTTCATCCCG CCCAGGCTGCAAAAAATAGATAACAAGCACAGAAAGTTGATGATACGTGT GCCTATTTGTCATAGATGCCGGAGACAGACCTCTTCCACCCGACCCATGA TATCAATTCGTCAGTGCCATTCGCTCCCGAAACGCAGGTTGCAAGTGCTC CTCACGGAATTCGCCGTCAAGTACGGTGAGCGTATAACAGCGCAGCTTGA AGATGCTGAAGAGAAAGAGGGAGGATCGCAGCCGCCGCTGAACGGCGATG ACCTCCCGCTCCCCGACAGCGACACAATAGGAGACTGCCTCCCCATATTC CGATTTATGAGGGCGGGTCTTACAGTGGACGAATATCGACCCCACGGGGA CGCTGCCTACGAAGAGGAGCTGCAGAAGAGGGTGGAAGCCGCGCTGTCAT TGTCTCGGCCAAGAGACACCAGTGAGTGGTATAGTGTAAGGCTTTACCCT AAGGTGTAAATGGTGACTTTTCCCGCGTTCATTGTTGAAGAGAAACAAAT GATGCGGTAGTCCCTTAATCGCGGGGGCTCGAGTCGGGATGGTTGCGCTC AGCGCAGGGGGCGGTAGAGAGGTGGCTGCAGAAGTACACAAGGTATTCCC AGTATAAGCTTTTTGTGGAACTGCACACTTTTATTCACCTACAGTATTCG AAGGAACTTTTCCTTTCGTTTATTCCCGAAAATGCGAAATTTGCCGAGAA ACGAAATCCAATGTTGTCACGTGCTGTGCACCCCTTATCTCACGCCCGTA TAGCCTTATGGGAAACCCCGGCATCCCACTATATCCCTCCTCACATCTAA TCAAGAAGATTGCCTAGCTTGTAGGTTCTTTGCTTGGCGTTGTTTATATG CTGTTGTTGCTGTTGTTGTTGTTGTTGGTCTCACATTCAGCAGAAGATCA ACTGGATTTGATAGCCTTCTGCTCGTGGTCAGTTGAACAGAGAAAATAAT TTTCCCCTGTTCCCGCATATTATTTTATTTTCGCAGCGATTTTGAAAAGC ATTTGGGCTCCAGCCGCGGCTGGCGGAGCCTACCAAGAAGAGATGGCGGT GGCGACGTACGCCGTGCAGGTGGCGAGTACCGTCGCTAGAGAGCTGCAGG GCGAACTTTGCCGAAAGGACACGATCAGGTGGGTCCGCTCGCCTCTCGGT GTACTGATTCCTCGTAGAAGTGGACGAGATGCTATTTTTCTGTTTAGAGG TGGAGATGGTGGAGATAGAAAGGAGAGTGGAGGAGGCAACGAGTTTGCGA CATGGACCAACTATTCAGTGCGATATCCAAGAGTTTAGGAGGGCAAAGCG CGGAGCTCTTCAGATAATCCCAAGAGAATGTCGACCCGTTTCATCCTAAG TAACCCTTTTGCCTGTCACACATTAATTATGAATTCCCTTTACGTCCACG ACACTCTCTTTTTTTTTTGTACAACCGTCTCATGCCGCGCCTGCTGCTCC CTACCCGAGACTATTAACGCTCACACCACCAATCCCGCCCGCTTTTATCC CGTGGTGTCCCGTAGCAAGATTGACTCGTCTCCGGTAACGGTGGCAGACT TCAGCGTCCAGGCGATCGTGCTGGGCGTACTCGACCAGTACTTCCCAGAC CACGGCTTCATCGCGGAGGAAACGTCGTCCGTCCTGCGAGAAGACTTGCG GTCGTTTGAAGCAGTCCGGGTTGTGGTGAGCAAGACCCTGTGTCGGGAGC TCACCGAGGGAGAGCTGTGCGCGACTATTGACCTCGGAGCCAGGGGGTTT GGTGAGCGGCAGAGGGGTCGCCGTGGGAGGACGTGGGTGCTGGACCCGAT CGACGGCACCAAAGGATTTCTAAGGGGGGAACAATTTTGCGTTGCGTTGG TGAGAAAGATGCAGGACGTGACTCAAGCTCTGTTTGTCGAAAAATATGGT GCTGTATTTCGGTTATCGGATCAACGGGGGAATTCTTTGCAGGCGAGCAG GGGTTTTTGTACCTGCATCCACCGCTTGTGTTTGTTGATGCTGTTATTTT TTCACGGCTACTCAAACGGTGGCTGCGTGGCGGCGTACAGTCCCGCCATG AATACATGAAGCAAGTTTCGCCCGTTCGAATGGTGCGTTTGTACGTTTAA GCAGTGCATTGTCGTTGAGATGTGCGGGCTCGATCACTCGCGCGTGCCGA CGCTGAACACGTTGCGTTGCGTGACTTCCTCTCCGGCTTGTGGAAAGTCA TCGCGCGAAAGATTTCATTGAAACCGCAGCGGCACAGAAAATCAAGCGCC CCCTTTCCTTTAATATGTTGCGTGCACTCACCCCCAACCTCCCATTTCCC CTGCGCAAGGGTTTGCTCGACGAGGGTAAGGCGGTTGCGGGTGTTCTTGG GTGCCCCAACCTACCGGCAGCGACGGTGGTAGCCGATGGCAAAATAACTG GGAAAGACAGGTAAGCCCACGTTTAGCGCGGAGGCCACAGCACACGCGAC GCGTGGTGTAAACTTCAAGTGCAGTAGGCACAGCGTACGCCGTCGCTCTC CAGCACTGACCCGTTGGCCCCGCGGTTCAGGTTGTGTATCTGCTTTCGCA AACCGGCGTTCGCTCGTGGTCCTGGAACCGGCTCATCTTTCGCGGTGCTA TGGTGGTATAGCAAAGAGGTGCAATCACGTCGTACTGCGGGAATTCCGCT TTCCCGCACAAAGTAACATCTTCCGTGCAACGGCTTGGGCTGGGGGTCTC TATATACACCCCACCCCCGCCCCACCTGATACACGGCATCTCTCAGATAG GACGCGGCATATCACACTCATGCCACGGTCGCCACCTCACACAGGGGACT GCTCTACACCGCGGCCATCGGGGAAGGAAGCTTCGTTCGGCCTCTGTCGT CGGGAGCAAACGAAGCACGGCGGATCACGGTCGACGGCGCTCGGCGGGCG AGCGAGGTTCGCGTGCTGGAGTCTGTCGAGCCCGGGCACAGTTCTCATAC CGTCGCGGCGCGGGTGTCCGAGGACCTTGGAATAGACTCGCTGCCCATCC GAGTGGACGGGCAGTGCAAGTACGGGCTGCTTTCTCAGGGACAGGTAATG ATAGTTTAGGAAAAACGTTTGATATGGAGAGAGAGACCAGGGAGGTAAGG ACCGCGTTGTGAAGCTCTCTACCTGTGTCAATTTAGAATATGCCGCTCTA GAGTTTGCTGCTCCGCACGCAGATGAAGATGGACGCTGATCAATATTGGA AAGCCGCGCGCCTCTCCCCCCCCCCTCGTCGTCGTCGTGCTCGGGCGTCG AAACACAGGGAGGAATATACCTGCGACTTCCCAGATGGGGTTATGTAGAG AACATATGGGATCATGTCGCTGGGACGGTCATCACCCAGGTGAGATATTT ATATATTTTTCGTATTTTTGGGGGGAAAAAAACGAATAGTGGGAAAGAAG GCGATGCTCCGTTTAACTTTTCACGTCCGCGCTAAAGTACAAATACTTGG AGCCCGTGACGCAGGATGGAGATTTTTCACGCCCGCGTAGAGCGAAAACC TGGCTGACGCTTGGTGGCGCGCGCCTTTGAATAATATTTCAGCCGCAACC GCCACCTCCGGGTAGATCTACCTTTTCCCCGTAATTTCGAGCAATGCCTT GAAATATGCCCGTATCACCCGATTCCTTTCAGGAGGCTGGAGGAAAGGTC ACCGACAGCCGCGGGGAGCCGTTGGACTTCTCGCTAGGCGCAAAGCTTCC GCGGGAGGTGCGCGATCGTGCTGTGTTGTTCATTCGTTGAAAGAGTGAAA TTCCTCCGGGTGGAAATGCGCATCAATAACACACAACAAATCGCCTCTTG ATAATCGCTTGGACCTAGAGGCATGGTAGAGCTTGAGCGTGCGTCCTCCT TCCCTCTCGCCCCCCGTTTTTTTGTTTTTTTAAGTTTATACACTAGGGAG TGGGACTATTCCCCGTTTCCGAAAAAAAGGTACATATGCCTTCCCTTCTG GTACCCTTTCTATCGGTTGTTGTGTCTCCATTCCCATTCAGGTTGTGGGG ATAGTCGCCACGAATGGAAATATTCACGCCGAGGTCATTCGTGTGGTTCA CCGCCGCCAGGTTGAGGACTGGGGAAGGTGGGGCCCCTGAAACCTTTCTT AAGAAGACACGGCTCCTTCCCTTTGGTTTGAGAGTGCTAGTGGCTTGGGG TGCGTTTCCCGTCTCCCCACCCCTTGAGTATCGCTTATTAGCCTTCCCTC CCTGGGTTAGCTTATAAATATCGCCAACACCAAGATCGTTTGTCCCCGAT TATGTTGCGGGCTCGCGGCGGGGCGGGGGGGTTGCAGGGTTGTGATCGAG GCCAAACGCAAGGCCGGTAAAAGCGACGTCGCAGCGCCGCCGTTGCCGGG GGTCGACTGGACGTCTGGGGGCGGCCCCGTAACGATCGGCGACGATTGGT GGGCCACGGCGCGCTCTCTGCGGCAGCCCTTGGCAATGAGGACTAGCGGG CAGTTCTACGGCGCGCTTGAGCGGTGGGTGCAAGGAAACCTCGGTCGCCC GAGATGAGGTGGTTGCTCCCCCAACCCCACCCAATTGCTTCATGCCAGAT AGTGTCTAATATATTTAACTTTGACGTAAACATATAGCAAAGCCTCTATG TCAAAAGCCGGCGAATGAAAGAAATTGATCTTGTAGGTAGGTCGACTCGA CATTATTTGACCGCGACCGTTAAGGTCGAAAGCCTCGTGGTATATCCGGG CCCATCGGGTGCGACGGTCGCGGCAATGTGTACATAACACTTCCGAACTT TATATATATAAAGGATAGCGTGTGTTTTCACCCACTCCAACAACTCGACG CACCAGTTTTACCCGTAGCCTCTTGGGCACGCTACCTGTGGCACAGGGGC TGGGATAAGCTCGTGGCCGTGCTCTTCCACGGCATCTGGACGCCGGAGTC TCAGCACGCCGTAAGCATCCTCGAGAGCCTCGCGAGTCGGCAGCAGCATC ACCAAGAACGGTCCCAAAAATATCTCGAAGCATCCCCGATGACAGCGAAT GCCCGCTGCAGAGCTTCCACAGCTTCCCGTTCGGTCTTGGGGGAAACGCT GGTCCGAGCGCCGACGGAAAGGTCGGGAAAGTGGATGGCGGCAGTGCGCC GGGCGCCTGTCGAACGCATGTCGGTGGTGCTAGCGGAGGCGGATGTCACG AGTCTTATAGACGTGGCGGACAGGCAGGCGATCTCGAGGCTGCCCTCAAT GCACGTGCACCTGGGCGGGAGGGAGATAGCGAGGTTTCCCGTTGATCGCG ATGAGACGGCGGAGTCGCTGGAAGCGAAGATCGCCGAGATCGCTGCCAGC GCCTGTGGGCAAGGATAGTAGGCAAGCTAACTTCCGCTACCGCGTTGGGT GTGCGCACGATGCTCTGGCGTGGATTGGAGCTGGAGTCAAGGTTTGGACG CGCCCGGTACAGTACGTGAGCGAGGCTAACGAATCGATACACGGCGCCGC GACGTCCTCGATCCATGAAAGTTAAAATGTTTTTAGAGGTGCGGACCGCT AGTATTTTTACTC
back to top

Coding sequence (CDS) from alignment at H-elongata_contig6147:2..6264-

>mRNA_H-elongata_contig6147.13700.1 ID=mRNA_H-elongata_contig6147.13700.1|Name=mRNA_H-elongata_contig6147.13700.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4554bp|location=Sequence derived from alignment at H-elongata_contig6147:2..6264- (Himanthalia elongata Himel1 dioecious)
ATGCCTCGTCCAAGTGTGCTTGCAACTGGCCTCGTGTGCAGTACATTCGG
TCTGATATGTGTGGCACCAAGCAGTGCAAAGGTGGTGTGTTCTTCGGTTG
GATTCTGCGCCTCCCCGCTGAGGTTGACACCTTCGTCAGACAAGAGGAGA
CTCAGATGCCTCGTCCAAGTGTGCTTGCAACTGGCCTCGTGTGCAGTACA
TTCGGTCTGATATGTGTGGCACCAAGCAGTGCAAAGGTGGTGTGTTCTTC
GGTTGGATTCTGCGCCTCCCCGCTGAGGTTGACACCTTCGTCAGACAAGA
GGAGACTCAGCAATATGAAATGGAGGTCAAGGATGAATATGTCCGCGACG
CCGCAGACCGAGCTGTTGCTACTCGCCCGACTTGGACGGGGTGACGAGAT
TGTACGAGATAGCAATATGAAATGGAGGTCAAGGATGAATATGTCCGCGA
CGCCGCAGACCGAGCTGTTGCTACTCGCCCGACTTGGACGGGGTGACGAG
ATTGTACGAGATAGGTTGCAAGTGCTCCTCACGGAATTCGCCGTCAAGTA
CGGTGAGCGTATAACAGCGCAGCTTGAAGATGCTGAAGAGAAAGAGGGAG
GATCGCAGCCGCCGCTGAACGGCGATGACCTCCCGCTCCCCGACAGCGAC
ACAATAGGAGACTGCCTCCCCATATTCCGATTTATGAGGGCGGGTCTTAC
AGTGGACGAATATCGACCCCACGGGGACGCTGCCTACGAAGAGGAGCTGC
AGAAGAGGGTGGAAGCCGCGCTGTCATTGTCTCGGCCAAGAGACACCAGT
TGCAAGTGCTCCTCACGGAATTCGCCGTCAAGTACGGTGAGCGTATAACA
GCGCAGCTTGAAGATGCTGAAGAGAAAGAGGGAGGATCGCAGCCGCCGCT
GAACGGCGATGACCTCCCGCTCCCCGACAGCGACACAATAGGAGACTGCC
TCCCCATATTCCGATTTATGAGGGCGGGTCTTACAGTGGACGAATATCGA
CCCCACGGGGACGCTGCCTACGAAGAGGAGCTGCAGAAGAGGGTGGAAGC
CGCGCTGTCATTGTCTCGGCCAAGAGACACCACGATTTTGAAAAGCATTT
GGGCTCCAGCCGCGGCTGGCGGAGCCTACCAAGAAGAGATGGCGGTGGCG
ACGTACGCCGTGCAGGTGGCGAGTACCGTCGCTAGAGAGCTGCAGGGCGA
ACTTTGCCGAAAGGACACGATCAGCGATTTTGAAAAGCATTTGGGCTCCA
GCCGCGGCTGGCGGAGCCTACCAAGAAGAGATGGCGGTGGCGACGTACGC
CGTGCAGGTGGCGAGTACCGTCGCTAGAGAGCTGCAGGGCGAACTTTGCC
GAAAGGACACGATCAGCAAGATTGACTCGTCTCCGGTAACGGTGGCAGAC
TTCAGCGTCCAGGCGATCGTGCTGGGCGTACTCGACCAGTACTTCCCAGA
CCACGGCTTCATCGCGGAGGAAACGTCGTCCGTCCTGCGAGAAGACTTGC
GGTCGTTTGAAGCAGTCCGGGTTGTGGTGAGCAAGACCCTGTGTCGGGAG
CTCACCGAGGGAGAGCTGTGCGCGACTATTGACCTCGGAGCCAGGGGGTT
TGGTGAGCGGCAGAGGGGTCGCCGTGGGAGGACGTGGGTGCTGGACCCGA
TCGACGGCACCAAAGGATTTCTAAGGGGGGAACAATTTTGCGTTGCGTTG
CAAGATTGACTCGTCTCCGGTAACGGTGGCAGACTTCAGCGTCCAGGCGA
TCGTGCTGGGCGTACTCGACCAGTACTTCCCAGACCACGGCTTCATCGCG
GAGGAAACGTCGTCCGTCCTGCGAGAAGACTTGCGGTCGTTTGAAGCAGT
CCGGGTTGTGGTGAGCAAGACCCTGTGTCGGGAGCTCACCGAGGGAGAGC
TGTGCGCGACTATTGACCTCGGAGCCAGGGGGTTTGGTGAGCGGCAGAGG
GGTCGCCGTGGGAGGACGTGGGTGCTGGACCCGATCGACGGCACCAAAGG
ATTTCTAAGGGGGGAACAATTTTGCGTTGCGTTGGGTTTGCTCGACGAGG
GTAAGGCGGTTGCGGGTGTTCTTGGGTGCCCCAACCTACCGGCAGCGACG
GGTTTGCTCGACGAGGGTAAGGCGGTTGCGGGTGTTCTTGGGTGCCCCAA
CCTACCGGCAGCGACGGACGCGGCATATCACACTCATGCCACGGTCGCCA
CCTCACACAGGGGACTGCTCTACACCGCGGCCATCGGGGAAGGAAGCTTC
GTTCGGCCTCTGTCGTCGGGAGCAAACGAAGCACGGCGGATCACGGTCGA
CGGCGCTCGGCGGGCGAGCGAGGTTCGCGTGCTGGAGTCTGTCGAGCCCG
GGCACAGTTCTCATACCGTCGCGGCGCGGGTGTCCGAGGACCTTGGAATA
GACTCGCTGCCCATCCGAGTGGACGGGCAGTGCAAGTACGGGCTGCTTTC
TCAGGGACAGGACGCGGCATATCACACTCATGCCACGGTCGCCACCTCAC
ACAGGGGACTGCTCTACACCGCGGCCATCGGGGAAGGAAGCTTCGTTCGG
CCTCTGTCGTCGGGAGCAAACGAAGCACGGCGGATCACGGTCGACGGCGC
TCGGCGGGCGAGCGAGGTTCGCGTGCTGGAGTCTGTCGAGCCCGGGCACA
GTTCTCATACCGTCGCGGCGCGGGTGTCCGAGGACCTTGGAATAGACTCG
CTGCCCATCCGAGTGGACGGGCAGTGCAAGTACGGGCTGCTTTCTCAGGG
ACAGGGAGGAATATACCTGCGACTTCCCAGATGGGGTTATGTAGAGAACA
TATGGGATCATGTCGCTGGGACGGTCATCACCCAGGGAGGAATATACCTG
CGACTTCCCAGATGGGGTTATGTAGAGAACATATGGGATCATGTCGCTGG
GACGGTCATCACCCAGGAGGCTGGAGGAAAGGTCACCGACAGCCGCGGGG
AGCCGTTGGACTTCTCGCTAGGCGCAAAGCTTCCGCGGGAGGAGGCTGGA
GGAAAGGTCACCGACAGCCGCGGGGAGCCGTTGGACTTCTCGCTAGGCGC
AAAGCTTCCGCGGGAGGTTGTGGGGATAGTCGCCACGAATGGAAATATTC
ACGCCGAGGTCATTCGTGTGGTTCACCGCCGCCAGGTTGAGGACTGGGGA
AGGTTGTGGGGATAGTCGCCACGAATGGAAATATTCACGCCGAGGTCATT
CGTGTGGTTCACCGCCGCCAGGTTGAGGACTGGGGAAGGGTTGTGATCGA
GGCCAAACGCAAGGCCGGTAAAAGCGACGTCGCAGCGCCGCCGTTGCCGG
GGGTCGACTGGACGTCTGGGGGCGGCCCCGTAACGATCGGCGACGATTGG
TGGGCCACGGCGCGCTCTCTGCGGCAGCCCTTGGCAATGAGGACTAGCGG
GCAGTTCTACGGCGCGCTTGAGCGGGTTGTGATCGAGGCCAAACGCAAGG
CCGGTAAAAGCGACGTCGCAGCGCCGCCGTTGCCGGGGGTCGACTGGACG
TCTGGGGGCGGCCCCGTAACGATCGGCGACGATTGGTGGGCCACGGCGCG
CTCTCTGCGGCAGCCCTTGGCAATGAGGACTAGCGGGCAGTTCTACGGCG
CGCTTGAGCGGGGCTGGGATAAGCTCGTGGCCGTGCTCTTCCACGGCATC
TGGACGCCGGAGTCTCAGCACGCCGTAAGCATCCTCGAGAGCCTCGCGAG
TCGGCAGCAGCATCACCAAGAACGGTCCCAAAAATATCTCGAAGCATCCC
CGATGACAGCGAATGCCCGCTGCAGAGCTTCCACAGCTTCCCGTTCGGTC
TTGGGGGAAACGCTGGTCCGAGCGCCGACGGAAAGGTCGGGAAAGTGGAT
GGCGGCAGTGCGCCGGGCGCCTGTCGAACGCATGTCGGTGGTGCTAGCGG
AGGCGGATGTCACGAGTCTTATAGACGTGGCGGACAGGCAGGCGATCTCG
AGGCTGCCCTCAATGCACGTGCACCTGGGCGGGAGGGAGATAGCGAGGTT
TCCCGTTGATCGCGATGAGACGGCGGAGTCGCTGGAAGCGAAGATCGCCG
AGATCGCTGCCAGCGCCTGTGGGCAAGGATAGGGGCTGGGATAAGCTCGT
GGCCGTGCTCTTCCACGGCATCTGGACGCCGGAGTCTCAGCACGCCGTAA
GCATCCTCGAGAGCCTCGCGAGTCGGCAGCAGCATCACCAAGAACGGTCC
CAAAAATATCTCGAAGCATCCCCGATGACAGCGAATGCCCGCTGCAGAGC
TTCCACAGCTTCCCGTTCGGTCTTGGGGGAAACGCTGGTCCGAGCGCCGA
CGGAAAGGTCGGGAAAGTGGATGGCGGCAGTGCGCCGGGCGCCTGTCGAA
CGCATGTCGGTGGTGCTAGCGGAGGCGGATGTCACGAGTCTTATAGACGT
GGCGGACAGGCAGGCGATCTCGAGGCTGCCCTCAATGCACGTGCACCTGG
GCGGGAGGGAGATAGCGAGGTTTCCCGTTGATCGCGATGAGACGGCGGAG
TCGCTGGAAGCGAAGATCGCCGAGATCGCTGCCAGCGCCTGTGGGCAAGG
ATAG
back to top