mRNA_H-elongata_contig614.13694.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig614.13694.1
Unique NamemRNA_H-elongata_contig614.13694.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 1.750e-116
Identity = 182/308 (59.09%), Postives = 240/308 (77.92%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSK-AVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQAVIIPFS 951
            +F SVANVT+P +YQ+ L A+++ NF+LSW+LS GCV+  DFHDRLL++TIGPIVG+ LL  TY CA+ +HQG    + +V +KHVSMVLLLTF VYS VS+I+F+ FACE L ++  YLR+DYRIECDSPKH+A +I A  MI+ Y +GIP LYA  +FRDR++L K    RE + RV S S LWKPY+PS FY+EV EC  R+ L GVVVFIYP+T+ QIAVTL++AF F +++E L+PYS+ WDRW++R GHV+VF+SMF+ALL KVDVA E ASS+++   + VAAHV M+L VVI+A+++  S
Sbjct:  371 EFTSVANVTYPSVYQDLLTALDIFNFDLSWILSVGCVVRTDFHDRLLVSTIGPIVGLMLLTCTYACALQIHQGSSQNLQSVWNKHVSMVLLLTFFVYSNVSAILFKAFACEQLGESI-YLRSDYRIECDSPKHQAFKINAGFMIVLYTVGIPTLYAGLVFRDRHLLKKDEADREDTPRVTSTSGLWKPYRPSVFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSS 677          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 5.030e-114
Identity = 186/309 (60.19%), Postives = 238/309 (77.02%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSK--AVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQAVIIPFS 951
            QF+SVANVT+PD+YQ FLD VN+LNF++ W+ SAGC++  DFH RLL+ TIGP+V + LL ITY  A     G E A+  +RHKH+SMVLL+TFLVYS VS+ VFQ+FACE LDD+K YLRADYRIECDS +H+A Q++A +MIL YP+GIPL Y   L++ R VL    A  R+ S +V+ ISDLW PYKP RFY+EVIEC+RR+SLTGVVVFIYPNT+ Q+AVTL++AF F + +  LAPY + WD  IS  GHVIVF SM+ ALLSKVDV+ ERA S+ + A + VAAH  M++AVV++ ++I +S
Sbjct: 1447 QFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 1.300e-113
Identity = 182/296 (61.49%), Postives = 223/296 (75.34%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVV-MHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSK-AVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMI 912
            QF SVAN+ FP +YQ FLDA+ L NF+L WVLSAGCV   DFHDRLL++TI PIVG+  L   Y  A    H+  ED    V HKHVS+VLLLTFLVY+ VS+++FQTFACE LDD KNYLRADYRIECDSPKH A Q+YA  MI+ Y +GIP LY  FLFRD +VL +    RE  +R+   +DLWKPY+PS FY+EVIEC RR+ L GVVVFIYPNT+ QIAV L++A VF M++EALAPY++ WD W+ R GH +V +SM++ALL KVDV+ ERASS+R+   + VAAHV M+
Sbjct:  649 QFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQ-RVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMV 943          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.350e-113
Identity = 184/304 (60.53%), Postives = 238/304 (78.29%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSKA-VSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQAVI 939
            QF +VANVT+PD+YQ FLD + + NF+LSWVLSAGC++  DFHDRLLI+TIGPIV +  L  TY  A  +++G  + +  + ++HVSMVLLLT  VYS VSS +FQTFACE L D + YLRADYRI CDS KH+ALQ+YA VM++ Y +GIP LY V LFRDR+VL ++   RE ++RV S S+LWKPYKPS FY+EVIEC RR+ L GVVVFIYPNT+PQIA+TL+MAF F +++E LAPY++ WD W+SR GH +VF+SM++ALL KVDV++ER  S+R+  V+ VAAH  MIL +VI+ V+
Sbjct: 1739 QFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVV 2042          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 1.680e-112
Identity = 176/308 (57.14%), Postives = 237/308 (76.95%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSKA-VSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQAVIIPFS 951
            QF SVANVT+PD+Y+ FLD +++ NF+LSWVLSAGC+   DFHDRLL +T+ P++G+  L  TY  AV M++G  +++  + +KHVS+VLLLTFL+YS VS+ +F+ F CE L+D  NYLRADY I+CDS KH+A Q+YA  M++ Y +GIP LYA  LFRDR+VL      RE ++R  S SDLWKPYKPS FY+EVIEC RR+ L GVVVFI+PNT+ QIA+TL+MAF F M++E LAP+++ WD W++RTGH +VF+SM+IALL KVDV+ ERA S+R+  ++ VAAH  MILAV+ +  ++ +S
Sbjct:  928 QFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWS 1235          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 5.550e-111
Identity = 175/304 (57.57%), Postives = 229/304 (75.33%), Query Frame = 1
Query:   22 LAAQFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSKAVS-REVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQ 930
            +  QF S ANVT+PD+YQ FL+ +++ NF++SWVLSAGCV+  DFHDRLL++TIGPI+ +  L  TYR    +++G    +  V  +HVSMVLLL FLVYS VSS+VFQTFAC+ L+    YLRADYRIECDS KH+  ++YA  MIL YP+GIP  Y   L RDR+VL K    RE   RV SIS+LW+PY+PS +Y+EVIEC RRI LTG+VVFIYPNT+ QIA+TL+M  VF +L+EAL PY+ +WD W+SR  H +VFMS+++ALL KVDV++E+ SS+++   + VAAH  MILAVV++
Sbjct:  686 IVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 1.630e-110
Identity = 175/296 (59.12%), Postives = 225/296 (76.01%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLS--KAVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMI 912
            QF +VANVT+P +YQNFL+ + + NF+LSW+LSAGCV+  DFHDRLL+ TIGPI    LL  TY  AV +H+G  + + NVRHKHV MVLLLTF VYS VS+ +F+TFACE L+D K YL ADYRIECDS KH+  ++YA  M+L Y  GIP LY+  LFRDR+VL   +A  +++ SR  S SDLWKPYKPS FY+EV+EC RR+ L GVVVFIYPN+S QIA+TL++AF F +++E LAPY++ WD WI+R GHV+V  SM++ALL KVDV+ ER+SS+ +   + V AHV M+
Sbjct: 1283 QFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMV 1578          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 7.740e-107
Identity = 171/301 (56.81%), Postives = 225/301 (74.75%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSK-AVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQ 930
            QFAS ANV +P +YQ FLD + +  F+L W++SAGCVL   FH RLL  TIGPI  + LL  TY  A  +++   + +  +  KHV + LLLTFLVYS VSS +F+TFAC+ L+D KNYLR DYRIECDS KH+  Q+YA  MIL YPLGIP+LY++ LF+DR VL K    R+ S+RVKS S+LW+PYKPS FY+EVIEC RRI LTG+VVFIYPNT+ Q+A+TL+MAF F +L+EA++PYS+ W+ W++R GHV+V +SM++ALL KVDV+ ERA S+ +   + V  H  MIL+VV++
Sbjct: 1099 QFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVE 1399          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 2.580e-106
Identity = 171/300 (57.00%), Postives = 228/300 (76.00%), Query Frame = 1
Query:   34 FASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLSKAVS-REVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQ 930
            F S ANVT+PD+YQ  L+ +++ NF++SW++SAGCV++ DFHDRLL++TIGPI+ +  L  TYR    +++G    +  V  +HVSMVLLL F+VYS VSS+VFQTFAC+ L+    YLRADYRIECDS KH+  ++YA  MIL YP+GIP  Y   LFRDR+VL K    RE   RV SIS+LW+PY+PS +Y+EVIEC RRI LTG+VVFIYPNT+ QIA+TL+M  VF +L+EAL PY+ +WD W+SR  H +VFMS+++ALL KVDV++E+ SS+++   + VAAH  MILAVV++
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 2727          
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 3.880e-106
Identity = 173/302 (57.28%), Postives = 233/302 (77.15%), Query Frame = 1
Query:   31 QFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSFDFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVLLLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYASVMILFYPLGIPLLYAVFLFRDRNVLS-KAVSREVSSRVKSISDLWKPYKPSRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAPYSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAHVSMILAVVIQA 933
            QF SVANVT+PD+YQ+ LD +++ NF+LSW+LSAGCV+  +FH RLL++TI PIV + LL  TY  A  +++G  + +  + +KHV++VLLLTF VYS VSS +F+ FAC+ LD +K+YLRADY IEC+S +H  +Q+YA  MI+ Y +GIP LYA  LF+ R+VL  +   RE   RVKSIS+LW+PYKP+ FY+EVIEC RR+ L GVVVFIYPNT+ QIAVTL++AF F +L+E LAPY++ WD WISR GH++VF+SM++ALL KVDV+ ERASS+ +   + VA HV MIL V+++A
Sbjct: 1184 QFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig614.13694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH65_ECTSI1.750e-11659.09Polymorphic outer membrane protein G/I family prot... [more]
A0A6H5JY65_9PHAE5.030e-11460.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI1.300e-11361.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI1.350e-11360.53Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G301_ECTSI1.680e-11257.14Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI5.550e-11157.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI1.630e-11059.12Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G2X5_ECTSI7.740e-10756.81Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FHG7_ECTSI2.580e-10657.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K0E9_9PHAE3.880e-10657.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig614contigH-elongata_contig614:10554..11507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue6.4e-99
Seed eggNOG ortholog2880.D7G5Y7
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons1
Model size954
Cds size954
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930991.4904466-CDS-H-elongata_contig614:10553..115071622930991.4904466-CDS-H-elongata_contig614:10553..11507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig614 10554..11507 -
1691679653.421249-CDS-H-elongata_contig614:10553..115071691679653.421249-CDS-H-elongata_contig614:10553..11507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig614 10554..11507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig614.13694.1prot_H-elongata_contig614.13694.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig614 10554..11507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig614.13694.1

>prot_H-elongata_contig614.13694.1 ID=prot_H-elongata_contig614.13694.1|Name=mRNA_H-elongata_contig614.13694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=318bp
MLYLNLVLAAQFASVANVTFPDIYQNFLDAVNLLNFELSWVLSAGCVLSF
DFHDRLLITTIGPIVGITLLGITYRCAVVMHQGCEDAMLNVRHKHVSMVL
LLTFLVYSRVSSIVFQTFACEVLDDNKNYLRADYRIECDSPKHEALQIYA
SVMILFYPLGIPLLYAVFLFRDRNVLSKAVSREVSSRVKSISDLWKPYKP
SRFYFEVIECIRRISLTGVVVFIYPNTSPQIAVTLVMAFVFTMLTEALAP
YSNSWDRWISRTGHVIVFMSMFIALLSKVDVASERASSERLLAVIFVAAH
VSMILAVVIQAVIIPFSV
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mRNA from alignment at H-elongata_contig614:10554..11507-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig614.13694.1 ID=mRNA_H-elongata_contig614.13694.1|Name=mRNA_H-elongata_contig614.13694.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=954bp|location=Sequence derived from alignment at H-elongata_contig614:10554..11507- (Himanthalia elongata Himel1 dioecious)
ATGCTTTATTTGAATCTCGTTCTTGCTGCACAGTTTGCCTCCGTGGCGAA TGTGACGTTTCCAGATATCTACCAGAACTTCCTCGACGCCGTTAATCTGC TCAATTTCGAGTTGAGCTGGGTCCTCTCTGCGGGCTGTGTACTCAGCTTC GACTTCCATGACCGCTTATTGATTACGACCATTGGACCGATCGTAGGTAT AACTCTATTGGGTATTACGTATCGTTGTGCAGTGGTCATGCACCAGGGCT GCGAGGACGCCATGCTAAACGTTCGGCACAAGCACGTGTCCATGGTACTC CTGCTGACGTTTCTAGTATATTCTAGAGTCAGCTCGATTGTATTCCAGAC GTTTGCCTGCGAGGTTCTCGACGACAACAAGAATTACCTTCGAGCCGATT ACCGAATTGAGTGCGACTCGCCCAAGCATGAAGCCTTGCAAATCTACGCA AGCGTCATGATTCTATTTTATCCATTGGGTATACCATTACTCTACGCCGT ATTTTTGTTCCGGGATCGAAACGTGCTGAGTAAGGCGGTAAGTCGAGAGG TTTCTTCAAGAGTCAAATCGATTTCGGACCTATGGAAGCCGTACAAGCCG TCGCGGTTTTACTTCGAGGTCATCGAATGCATTCGCCGAATCTCATTGAC AGGCGTCGTGGTGTTCATATACCCTAACACCTCGCCACAAATCGCGGTGA CCCTTGTGATGGCATTTGTTTTTACGATGCTGACAGAGGCACTCGCTCCG TACAGCAATAGTTGGGACCGTTGGATTAGTCGCACAGGGCACGTGATTGT TTTCATGAGCATGTTCATTGCTCTGCTATCGAAAGTAGATGTGGCCAGCG AGCGCGCAAGTAGCGAGAGACTTCTCGCGGTGATTTTCGTTGCGGCGCAC GTTTCTATGATTTTGGCCGTAGTTATCCAGGCCGTGATTATCCCGTTTTC CGTT
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Coding sequence (CDS) from alignment at H-elongata_contig614:10554..11507-

>mRNA_H-elongata_contig614.13694.1 ID=mRNA_H-elongata_contig614.13694.1|Name=mRNA_H-elongata_contig614.13694.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1908bp|location=Sequence derived from alignment at H-elongata_contig614:10554..11507- (Himanthalia elongata Himel1 dioecious)
ATGCTTTATTTGAATCTCGTTCTTGCTGCACAGTTTGCCTCCGTGGCGAA
TGTGACGTTTCCAGATATCTACCAGAACTTCCTCGACGCCGTTAATCTGC
TCAATTTCGAGTTGAGCTGGGTCCTCTCTGCGGGCTGTGTACTCAGCTTC
GACTTCCATGACCGCTTATTGATTACGACCATTGGACCGATCGTAGGTAT
AACTCTATTGGGTATTACGTATCGTTGTGCAGTGGTCATGCACCAGGGCT
GCGAGGACGCCATGCTAAACGTTCGGCACAAGCACGTGTCCATGGTACTC
CTGCTGACGTTTCTAGTATATTCTAGAGTCAGCTCGATTGTATTCCAGAC
GTTTGCCTGCGAGGTTCTCGACGACAACAAGAATTACCTTCGAGCCGATT
ACCGAATTGAGTGCGACTCGCCCAAGCATGAAGCCTTGCAAATCTACGCA
AGCGTCATGATTCTATTTTATCCATTGGGTATACCATTACTCTACGCCGT
ATTTTTGTTCCGGGATCGAAACGTGCTGAGTAAGGCGGTAAGTCGAGAGG
TTTCTTCAAGAGTCAAATCGATTTCGGACCTATGGAAGCCGTACAAGCCG
TCGCGGTTTTACTTCGAGGTCATCGAATGCATTCGCCGAATCTCATTGAC
AGGCGTCGTGGTGTTCATATACCCTAACACCTCGCCACAAATCGCGGTGA
CCCTTGTGATGGCATTTGTTTTTACGATGCTGACAGAGGCACTCGCTCCG
TACAGCAATAGTTGGGACCGTTGGATTAGTCGCACAGGGCACGTGATTGT
TTTCATGAGCATGTTCATTGCTCTGCTATCGAAAGTAGATGTGGCCAGCG
AGCGCGCAAGTAGCGAGAGACTTCTCGCGGTGATTTTCGTTGCGGCGCAC
GTTTCTATGATTTTGGCCGTAGTTATCCAGGCCGTGATTATCCCGTTTTC
CGTTATGCTTTATTTGAATCTCGTTCTTGCTGCACAGTTTGCCTCCGTGG
CGAATGTGACGTTTCCAGATATCTACCAGAACTTCCTCGACGCCGTTAAT
CTGCTCAATTTCGAGTTGAGCTGGGTCCTCTCTGCGGGCTGTGTACTCAG
CTTCGACTTCCATGACCGCTTATTGATTACGACCATTGGACCGATCGTAG
GTATAACTCTATTGGGTATTACGTATCGTTGTGCAGTGGTCATGCACCAG
GGCTGCGAGGACGCCATGCTAAACGTTCGGCACAAGCACGTGTCCATGGT
ACTCCTGCTGACGTTTCTAGTATATTCTAGAGTCAGCTCGATTGTATTCC
AGACGTTTGCCTGCGAGGTTCTCGACGACAACAAGAATTACCTTCGAGCC
GATTACCGAATTGAGTGCGACTCGCCCAAGCATGAAGCCTTGCAAATCTA
CGCAAGCGTCATGATTCTATTTTATCCATTGGGTATACCATTACTCTACG
CCGTATTTTTGTTCCGGGATCGAAACGTGCTGAGTAAGGCGGTAAGTCGA
GAGGTTTCTTCAAGAGTCAAATCGATTTCGGACCTATGGAAGCCGTACAA
GCCGTCGCGGTTTTACTTCGAGGTCATCGAATGCATTCGCCGAATCTCAT
TGACAGGCGTCGTGGTGTTCATATACCCTAACACCTCGCCACAAATCGCG
GTGACCCTTGTGATGGCATTTGTTTTTACGATGCTGACAGAGGCACTCGC
TCCGTACAGCAATAGTTGGGACCGTTGGATTAGTCGCACAGGGCACGTGA
TTGTTTTCATGAGCATGTTCATTGCTCTGCTATCGAAAGTAGATGTGGCC
AGCGAGCGCGCAAGTAGCGAGAGACTTCTCGCGGTGATTTTCGTTGCGGC
GCACGTTTCTATGATTTTGGCCGTAGTTATCCAGGCCGTGATTATCCCGT
TTTCCGTT
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