mRNA_H-elongata_contig6139.13692.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: D8LMZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ1_ECTSI) HSP 1 Score: 1058 bits (2737), Expect = 0.000e+0 Identity = 570/793 (71.88%), Postives = 632/793 (79.70%), Query Frame = 1
Query: 1 SLTSGQKGLDVHAVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSKKEAKTHGSRDSAELPPILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGMNAAADLVMQKRHKAGLRDRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQAFFLEDVLVQTKYLGEIGAGDGGSLLGGSDRVLGLGLEDEREEA----YECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
SLT+GQ GLDVHAVAESTRI L++QLHAFRDDE+AT LAFPP LDNTSRKFIHEAV+RLGL SKS GKGDAR ITV K + A+ PP+L+LG AR+ AL+AYF RH P+ RE +TVMSAA G GM+AAA+L QKRHKA L DR+A+A+ S GAS ++L+RR YN AQ++R+ A G +RMSA R+GLPAW+YRDTIVNMVRDHQ CLVSGETGCGKSTQVPQFLLDDPSIGP C IVCTQPRRISAIAVAERIAEERGE GG VGY IRLESSVSKDTQLV MTPGILLKKLG DPMLK+FTHVLIDEVHERDRNSEFLLIVLR L+ KRPDLRL+LMSATLQQGKYS YFGGCPI TIGARTFPVQAFFLEDVLVQT YL EIGA GG GG +LG +E E A Y C+LCGK GFRSA+ELGTH A+CFGTAGLDPALEG++DEGLELL++ A V GA ++ G + G NV G E + + +AD V G +P+ E+++E YL E +AA ED+M+ GL DALA SQRWDGRG FR ERA+A +GRA LLT+YQF FDD +VD+EL+ECLLRYICRSAYE+GAVLVFLPGWDDITRLG FLRQS HF DE+KFQIL LHSGVPT KQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLV QWVSKASARQRRGRAGRTKAGVCFHLFSA RHESLR+HQESELLRTPLE
Sbjct: 40 SLTAGQVGLDVHAVAESTRIALEKQLHAFRDDEDATQLAFPPNLDNTSRKFIHEAVKRLGLTSKSYGKGDARDITVKKXXXXXXXDGNGAQRPPMLQLGNARDAALKAYFSRHPPSRREADTVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRTSMYNAAQSRRQRAAGHQRMSAFRQGLPAWEYRDTIVNMVRDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGEKIGG-TVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDEVHERDRNSEFLLIVLRGLLAKRPDLRLMLMSATLQQGKYSEYFGGCPITTIGARTFPVQAFFLEDVLVQTDYLKEIGADTGGG--GGGKGLLGGSGVEELEAAGTDSYSCALCGKGGFRSAEELGTHVAMCFGTAGLDPALEGFSDEGLELLVSGAGXXXXXXXXXXXVVSGA--------RAXXXXXXXXXXXXXXWHGSGDADAGPNVPGGHAEEID-MAQFDADSVGGDPEPVAEEDEEEEYLGE-LAAREDEMD-GLQDALA-SQRWDGRGAFRAERAAAKTGRAEELLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGDFLRQSLHFSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSALRHESLREHQESELLRTPLE 817
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A6H5JK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK76_9PHAE) HSP 1 Score: 701 bits (1810), Expect = 4.660e-237 Identity = 417/663 (62.90%), Postives = 454/663 (68.48%), Query Frame = 1
Query: 637 QVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDE-----------VHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQA---------------FFLEDVLVQTKYLGEIGAGDGGSLLGGSDRVLGLGLEDEREEA----YECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAA-------------------SGAGSPRFEGKHVSV-------------------GASVVGIGKEQ-------SGVR-----VLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLEVNRMGV 2385
Q CLVSGETGCGKSTQVPQFLLDDPSIGP C IVCTQPRRISAIAVAERIAEERGE GG VGY IRLESSVSKDTQLV MTPGILLKKLG DPMLK+FTHVLIDE VHERDRNSEFLLIVLR L+ KRPDLRL+LMSATLQQGKYS YFGGCPI TIGARTFPVQA FFLEDVLVQT YL EIGA GG GG +LG +E E A Y C+LCGK GFRSA+ELGTH A+CFGTAGLDPAL+G++DEGLELL++ A +G G P F VS+ GA+ G G SG R AV G + G NV +G E + + +AD V GG +E E+D+E YL E +AA ED+M+ GL DALA SQRWDGRG FR ERA+A +GRA LLT+YQF FDD +VD+EL+ECLLR LG FLRQS HF DE+KFQIL LHSGVPT KQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHL IKTLV QWVSKASARQRRGRAGRTKAGVCFHLFSA RHESLR+HQESELLRTPLE +G+
Sbjct: 5 QACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGG-TVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDEASDGIVSCRGDVHERDRNSEFLLIVLRGLLAKRPDLRLMLMSATLQQGKYSEYFGGCPITTIGARTFPVQASRLSTARLLTQSQQAFFLEDVLVQTDYLKEIGADTGGG--GGGKGLLGGSGVEELEAAGADSYNCALCGKGGFRSAEELGTHVAMCFGTAGLDPALKGFSDEGLELLVSGAXXXXXXXXXXXXXXXXXSPAGGGEPPFLLSPVSLPLPPSQVGAAAVAVYGGDTGAAAAGRGTSDANGNATVSGARGXXXXXXXGGAVTSNGWHGSGDADEGPNVPEGHAEEID-MAQFDADSV-GGDPEVEEEDDEEEYLGE-LAAREDEMD-GLQDALA-SQRWDGRGAFRAERAAAKTGRAEELLTRYQFAFDDEAVDYELVECLLR------------------------LGDFLRQSIHFSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLNIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSALRHESLREHQESELLRTPLEAKVLGL 635
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A835Z8N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N8_9STRA) HSP 1 Score: 571 bits (1472), Expect = 4.760e-182 Identity = 396/951 (41.64%), Postives = 491/951 (51.63%), Query Frame = 1
Query: 133 DNTSRKFIHEAVRRLGLVSKSRG----------------------------------------KGDARFITVSKKEAKTHGSRDSAELPPILRLGQAREEALEAYFLRHRPTERELETVMSAAT-GRGMNAAADLVMQKRHKAGLRDRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQV----------------------------------------------------------------------------------------------------PQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQAFFLEDVLVQTKYL-GEIGAGDGGSLLGGSDRV---------LGLGLEDEREEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRSAYEE------------------GAVLVFLPGWDDITRLGSFLRQSPHFCDEK-KFQILSLH------------------------------------SGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
DNT RK++H + LGLVSKSRG +GD+R+ITV K AK G+ ELP + L R+ AL YF H + E+ VM AT G G++ AA+L Q R + +A ++GA +L+ R Y AQ +R +++M R+ LPAW Y ++I+ ++R HQV LVSGETGCGKSTQV PQF+LDD + G C I CTQPRRISAIAVAERIAEER E AG VVGY IRLES++S QL MTPG+LLKKL DPML+ +THV+IDEVHERD+++EFLLIVLRDL+P RP+L+++LMSATLQQGKY++YFGGCPI TIGARTFPVQ FFLEDVL+QT YL G GA S G + + L L + C+LCG+ FRSA+ELGTH A+CFG G D G GAG+ + +V+ I + S R + S P + G+ + + S + G + P ED E D E++ T + + WDG G F A +A LL +YQF+FDD VD++LI LLRYIC SAYEE GAVLVFLPGWDDITR L++ P+F ++ +F+IL LH SGVPT +QR+VFVRPP G RKI+LSTNIAETS+TIDDVAFV+DSGRAKE SYDPHLK+KTLV QWVSKASA+QR+GRAGRTKAGVCFHLFSARRH +LRDH+ESELL +PLE
Sbjct: 3 DNTERKYLHTMCKGLGLVSKSRGTLVLLLQLRHKVPPVTPYSTQSHAVHLRTLKTSLLAPLKFQGDSRYITVRK--AKKAGNA-GGELPRLGELDLPRQVALATYFQAHPAGDEEMGAVMQLATEGGGIHTAAELAKQVRQQRT----KAAGAAASGAGEAELKTRERCYLAAQERRRRQPQYQQMLRCRQNLPAWGYCESILELIRAHQVVLVSGETGCGKSTQVNCCGDSVLARVHMHTLASLPIVQRCEYVDCAAHCGVRDRGTRIGSTSAFLPIVRLRQEYAGATVHPGRRSAGGALHDRVRAAAPHLNRCNRRNRRAAEQVPQFILDDAAQGARCMIACTQPRRISAIAVAERIAEERCEEAGA-VVGYTIRLESAMSSSVQLCMMTPGVLLKKLNTDPMLQQYTHVIIDEVHERDKSTEFLLIVLRDLLPLRPELKVVLMSATLQQGKYAAYFGGCPITTIGARTFPVQEFFLEDVLLQTGYLDGAEGAQQQRSAAGRAAQAGGALPSLQELAASLAAGAAPTFACALCGRRAFRSAEELGTHVAMCFG--GEDAGGGG--------------GAGATALD--------AVILIKRIHS--RRVHRSPQPLLLN--------GIEL----PQQDSIMEGYCDEDALPEDSPENALEDQEPSSDLAPILEDEADITAVTGVVPAKVVWDGVGAFGMRTADH---QAEDLLARYQFSFDDEMVDYDLIAALLRYICESAYEEPPSRAAXXXXXXXXXCEEGAVLVFLPGWDDITRQTDCLQRHPYFAGQQLRFRILQLHRHVHSARAYSYTSKSLSQARDGAAASCRLRRAAQRRSGVPTKRQREVFVRPPPGVRKIILSTNIAETSVTIDDVAFVVDSGRAKEQSYDPHLKLKTLVPQWVSKASAKQRKGRAGRTKAGVCFHLFSARRHGALRDHRESELLCSPLE 904
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: W7TIW9_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIW9_9STRA) HSP 1 Score: 551 bits (1420), Expect = 8.180e-176 Identity = 362/852 (42.49%), Postives = 471/852 (55.28%), Query Frame = 1
Query: 37 AVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDA-RFITVSKKEAK-THGSRDSAELP--PILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGMNA------AADLVMQKRHKAG------LRD---------------------RRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVP-KRP-DLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQAFFLEDVLVQTKYLGEIGAG-------------------DGGSLLGGSDRVLGLGLED-------EREEAYECSLCGKSGFRSAQELGTHAAICFGT----AGLDPALEGYTDEGLEL-LMAAASGAGS--PRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPR---AAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
A++E TRI+ QL+ R+D ++FPP LD T RK++H +LGL SKSRGKG+ RFITVSKK K HG +L P L + L + RH +E E ++ R ++ A + +R + G LRD ++ + + E+L RR + Q +R+ + M R LPA ++ + +V+ H V +VSGETGCGKSTQVPQF+LDDP +GPS + TQPRRISA+AVAER+A ER EA G + +GY IRLES VS+ +Q+VFMTPG+LL+KLG D L++F ++IDEVHERDRN++FLLI+LRDL+ +RP DLRLILMSATLQ K S+YF GCP+ATIG+ +PV+ F+LED L+QT YL ++G G +G LGG +R ED E + Y C +CG+ GFRS +E GTH +C G AG + A GY E LE L+ G P +E + G +G + + P +A D G GE + +G GG +P EG E L L T +A L YQ+ FDD +VD++LI LL YI +S Y GA+LVFLPGWDDI+RL LRQ P F + KK +L LHSGVP+ +QR+VF PP G RK+VL+TNIAETS+TIDDV FV+DSGR KE +YDP LK+ TL W+SKASARQRRGRAGR +AGVCFHL S RR ESL++ +ESELL TPLE
Sbjct: 68 AISEETRISFTTQLNELREDSSLQEISFPPTLDKTQRKYLHALAEQLGLTSKSRGKGEGERFITVSKKPKKGPHGDEQDEDLDRYPPFHLKKESLGLLRRHLARHAVRSQEREALLQQCISRSASSEATNTCAGNPTAVERGRGGAVRVADLRDPGPTPGGRAAVPATQTGQSLSKKQQRLYDPAMEEERLVRRCAEHAEKQARRDRHPRYASMLQARGRLPAAEHAALVTRLVKTHPVVVVSGETGCGKSTQVPQFMLDDPDVGPSLKMAVTQPRRISAVAVAERVAAERMEAVG-QTIGYNIRLESEVSEQSQVVFMTPGVLLRKLGGDRELREFNVIMIDEVHERDRNTDFLLIILRDLLRYQRPTDLRLILMSATLQTEKLSAYFNGCPVATIGSTCYPVREFYLEDALLQTSYLEKLGLGKGAGGDRAGQPPEQGQGKEEGSQRLGGRERAAKPRGEDPLLRTLCEAKAVYTCEMCGQRGFRSPEEFGTHVVLCDGAPVGGAGEEGAGHGY--EALEAKLLEGLEGEDDFVPDYEDWTETPGQ----LGPADLSAALAKDVDAPEGFVSAVEDPGEGEE-----------------LGCEG--GGGRPPYRHRASEG-------------EGVLFPMPGL-----------------TEVQAQEALRAYQYAFDDENVDYDLILQLLHYIDKSGYGPGAILVFLPGWDDISRLRDALRQDPDFGNAKKAWVLPLHSGVPSQQQREVFKSPPPGVRKVVLATNIAETSVTIDDVVFVVDSGRVKEKTYDPFLKLCTLQPTWISKASARQRRGRAGRVRAGVCFHLCSRRRFESLKEFKESELLTTPLE 863
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A7S4N6J1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N6J1_9STRA) HSP 1 Score: 482 bits (1240), Expect = 3.030e-150 Identity = 333/879 (37.88%), Postives = 449/879 (51.08%), Query Frame = 1
Query: 10 SGQKGLDVHAVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSKKEAKTH------GSRDSAELP----PILRLGQAREEALEAYFLRHRPT---ERELETVMSAAT-------------------------GRGMNAAADLVMQKRHKAGLR--DRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPI------------------ATIGARTFPVQAFFLEDVLVQTKYLGEIGA---------------------------GDGGSLLGGSDRVL----GLGLEDEREEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANA----LLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
+G+KG + H VAE RI + L A R+DE + PP L NT RKFIH+ +LGL SKS GKGDAR I ++K + G D E P L +G+ AL + L H P+ E E S+ T G G N A ++ + L+ D R++ ++ + + + RR + AQ +++ + RM R+ LPA+ + I + + H+V ++SG+TGCGKSTQVPQFLLDD IGP+ +IV TQPRRISAI+VAER+A ER E G VGY +RLE + S DTQL+F+TPG+LL++L + P L DFT V++DEVHERD+ +EFL+I LRDL+ +R DLRL+LMSAT+Q + +Y+ G +I RTFPVQ FFLE+VL T ++ + G GG GG+ R + + + C +CG SGF +ELG H A+C G + LEL E K + + + +G + SG E V++ E +E + E + +D+ E GL +WDG F A++ +L +YQ DD VD L+ ++YI +S+Y A+L+F PGW +I+ L + F D K IL LHSG+P+ +QR+VFVRPP+G RKI+L+TNIAETSITIDDVAFV+D+GRAKE SYDPHLK TL WVS+ASA+QR GRAGRTK GVCFHLFS RRH S R ESELLRTPLE
Sbjct: 102 NGEKGAEAHTVAEGDRIRFTKMLVAMREDENCNRIEMPPDLTNTERKFIHQLAIQLGLKSKSSGKGDARRIAITKVSERKKIAGQSLGDDDYLEAGDLALPSLNVGRKGAAALRRHILTHPPSAVEEAESRLTGSSITNVMLGIGGDAEEAEGDDEAGDGIVLGGGANVAEAGLLHALDELDLKGGDSRSKRKVAHTRTVD-ITRRAQRHERAQKAKKSHRDYGRMLKQRKVLPAYSFASHICDAIGTHRVTVLSGDTGCGKSTQVPQFLLDDTRIGPTASIVITQPRRISAISVAERVASERCEDVGS-TVGYNVRLEGATSADTQLLFVTPGVLLRRLQSSPDLNDFTIVIMDEVHERDKYTEFLMIALRDLMLRRDDLRLVLMSATIQTNELVTYWSGVGTEEWADIGGAVPPSLMPAEVSIPGRTFPVQEFFLEEVLSMTGFVDDDGLMFSPDMDRIETELMSLVTNQQPGILQQQKGGVSRGGNKRAGTQEGAVSVSQGDKSVLTCVMCGVSGFGLPEELGEHVALCNGGGNVTM---------LEL-------------EDKVRGIDLTFI-VGHDYSG-------------------------------EAVAK-----------------EEPSEEDAILPEYDSYDDEEEPGLRQG-----KWDGESPFGIADVVASNNLTTLTEEEMLNRYQSMHDDERVDDALLLETVKYIIQSSYGPEAILIFFPGWAEISEFTLLLESTEPFNDRTKCSILPLHSGIPSKEQRRVFVRPPEGVRKIILATNIAETSITIDDVAFVVDTGRAKEKSYDPHLKTSTLQPVWVSQASAKQRMGRAGRTKPGVCFHLFSRRRHSSFRPFLESELLRTPLE 902
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: K0SL66_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SL66_THAOC) HSP 1 Score: 463 bits (1191), Expect = 3.860e-147 Identity = 321/875 (36.69%), Postives = 445/875 (50.86%), Query Frame = 1
Query: 13 GQKGLDVHAVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSKKEAKTHGS---------RDSAELP--------PILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGM----------------NAAADLVMQKRHKAGLRDRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRD--HQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKL-----------GNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGC---------------------PIA-TIGARTFPVQAFFLEDVLVQTKYLGEIGA----------------GDGGSLL----GGSDRVLGLGLEDEREEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTF--RGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
G+KG H V+E RI L + L R+D++ + P L NT RKF HE ++LGL SKS GKG+ R I VSK ++ G ++ LP P + +G+ EEAL + L PTE E S TG + NA + R+ R ++ A +++R+ + AQ + + + +K+M R LPA+ Y I N++R+ +QV +++G+TGCGKSTQVPQFLLDDP IG + NI+ TQPRRISAI+VAER+A ER E AG + VGY++RLES +SK TQL+FMTPG+L+KKL G+ L+++TH+++DE+HERD+N+EFL+I L+DL+ R DL+LILMSAT+ + Y+ G P+ I RTFPVQ FFLEDVL T ++ E+ G GS+ G + L D + C +CGK GFR+A+E G+H A+C GT G S++ + G+ V A+ AA+ + N T ME E +G +E +EDD + L WDG F ++S S ++T+YQ +DD + ++EL L++YI +S++ +GA+L+F GW DI+ L +P F D KF + LHSG+P+ +QR VFV PP G RKIV FVID+GRAK SYDPHLK TL W+S+ASA+QR+GRAGR KAGVCFHLFS RRHE++R ESEL+RTPLE
Sbjct: 63 GEKGASAHTVSEEYRIQLTQILMDLREDDDKMEITMPSDLTNTQRKFCHELAKQLGLKSKSSGKGEERRIRVSKVQSGNSGGMMGTVNTGRKNPNVLPTEGDYKSIPRINVGKRGEEALRKHLLNFPPTEEE--NCESVETGSSLVKKHKESEERSGQFDSNALTPTDFKSRNPPAQRQQQL-ASQRRDRHERLVQQRIQYHKQAQMQTKASPQYKQMMKQRRKLPAFSYAQDICNVLRNPKNQVVILTGDTGCGKSTQVPQFLLDDPEIGATANILVTQPRRISAISVAERVASERCEQAG-QTVGYSVRLESCLSKRTQLLFMTPGVLMKKLHPVDGSSYQTEGSVNRLEEYTHIIMDEIHERDKNTEFLMIALQDLLDDRDDLQLILMSATMPTRDLAEYWCGVGSRRSREQSQADDGLSNPACMPVELNIPGRTFPVQEFFLEDVLSMTGFVSEVPGEADMQQIENELLALVGGPSGSVKNRNGGKHSKSKSFPLLDS-SPSMSCPMCGKEGFRNAEEFGSHVALCDGT-------------------------------------GESLIDLEDRLRGMEVAASGFDIMAANPE----------------------------TNEDTDDMEAVEMPDGEFEE---YDEDDGDDPL---------WDGESPFLQSAPKSSKPSLSEENMMTRYQTMYDDEATNYELTLELVKYIVKSSFGDGAILIFFSGWGDISEFALLLDTTPPFNDRSKFVVHPLHSGIPSREQRNVFVAPPMGVRKIV----------------FVIDTGRAKVKSYDPHLKTSTLQESWISQASAKQRKGRAGRCKAGVCFHLFSRRRHENMRPFVESELIRTPLE 839
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A7S3Q8V1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8V1_9STRA) HSP 1 Score: 450 bits (1158), Expect = 2.380e-137 Identity = 316/888 (35.59%), Postives = 434/888 (48.87%), Query Frame = 1
Query: 109 SLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSK----KEAKTHGSRDSAE--LPPILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGMNAAAD----------------------------LVMQKRHKAGLRDRRARAMISAGASPEQ------------------------------LRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAG-GK-VVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPD--LRLILMSATLQQGKYSSYFGGCPIAT-------IGARTFPVQAFFLEDVLVQT------KYLGEIGAGDGG--------SLLGGSDRVLGLGLEDER---------------------------EEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDME----------TGLHDALALSQRWDGRGTFR-------GERASATSGRANA--LLTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
+L P L NT RKF+H+ +LGL SKS GKGD R I VSK K G D + P L +G AL Y ++ E M + N + + ++ + G+R ++ ++ + +++R+ + QT + +K M R LPA +Y+ IV+ + +++V ++SG+TGCGKSTQVPQF+LDD IGP CNIV TQPRRISAI++AER+A ER E G GK +GY +R+E++ S TQ++F+TPG+LL+KL + P L ++THV+IDE+HERD+ +EFL+I LR ++ + L L+LMSAT+Q + Y+ G + RTFPVQ+F+LEDVL T + G G+G GG ++L S R +G G + E + C +CGK GF+ +ELG+H +C G D T LE + +H +V + G+ DE G NA+ V E Y DE++ +++ G+H +WDG F G + G +L +YQ DD +D ELI +LRYI +S+Y +GAVL+FLPGW +I+ L L + F D KF +L LHSG+P+ +QR VF RP +G RKIVLSTNIAETS+TIDDVAFVIDSGRAKE +YDPHLK TL W+S+ASA+QRRGRAGRTKAGVCFHLFS RRH + R+ ESELLRT LE
Sbjct: 206 TLEMPTDLSNTERKFLHQLAMQLGLKSKSYGKGDNRRIVVSKINTTSNNKNRGDEDGEKDMKLPELNIGVEAHRALHKYIKDFPASDVEKAEGMETGSSLWKNTSXXXXXXXXXXXXXXXXXXXXXXXMLTSGPYIQPNQKEEEGMRLLETLNELNIDSTTGKSKNDXXXXXXXXXXXXXXXXXXXYKQPKVDMKKRISLHKTLQTSKLTQPNYKSMKQARSKLPAHNYKSKIVDTIANNRVTILSGDTGCGKSTQVPQFILDDEVIGPGCNIVVTQPRRISAISIAERVAAERCENNGNGKSAIGYTVRMEANTSPSTQVLFLTPGVLLRKLQSSPSLSEYTHVIIDEIHERDKYTEFLMIALRQIMTRDTSSKLHLVLMSATIQTNELMKYWAGVGHVDMIPAEICVPGRTFPVQSFYLEDVLHITGVVSDENFAGGSGSGSGGMEDLEKDLAMLLESKRKIGNGSDGNXXXXXXXXXXXXXXXXXXXXXXELIMVSENSLVCVMCGKGGFKCPEELGSHMGLCMGPVVGDNNNSEMTMVDLENKV-------------RHANVCTIIAGVNDNNED------------------------------DENDKSKGKGNAEEVF------------EDYEDEDIVISDEERGIDXXXXXXXINGMHHG-----KWDGESPFAVADVLSGGXXXXXSRGTLTEEEMLNRYQMIHDDEQIDSELILEVLRYIHKSSYGDGAVLIFLPGWQEISELSLLLDSTHPFNDRNKFSVLPLHSGIPSKEQRLVFQRPRQGVRKIVLSTNIAETSVTIDDVAFVIDSGRAKEKNYDPHLKTSTLQPMWISQASAKQRRGRAGRTKAGVCFHLFSRRRHTAFREFLESELLRTSLE 1033
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A8J9RMQ1_9CHLO (3'-5' RNA helicase YTHDC2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RMQ1_9CHLO) HSP 1 Score: 445 bits (1144), Expect = 1.450e-136 Identity = 309/797 (38.77%), Postives = 413/797 (51.82%), Query Frame = 1
Query: 40 VAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSKKEAKTHGSRDSAELPPILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGMNAAADLVMQKRHKAGLRDRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDP-SIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQAFFLEDVLVQTKYLGEIGAGDGGSLLGGSDRVLGL---GLEDEREEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYIC-----RSAYEE----GAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLEVNRMGVVL 2391
V+E +R+++ QL F+ +E TS FPP L+N R +H R+ G SKS+GKGD+R +TVSK A ++D+ +LP + A E L+AY+ RH P E EL + + AA V Q+ L R+ A EQ RR H A K + A +++ R LP YR I+ + HQV LV+GETGCGK+TQVPQFLL+D + G C I+CTQPRRISAI++AER+A ERGE G VGY IRLES + L+F T G+LL+ L L D THV++DE+HERDR ++FLLI+LRDL+P P+LR++LMSATL +S+YFGGCP+ + T PV +LEDVL L+G D +LG G + GK+ A ++ +A + L G +DE + L+ GA+ + V V+ +S A G G +V + + G P+ D D D+ L + +Q AS + +++YQ + D VD LIE LL YIC R A E+ GAVL+FLPGWD+I RL L K+ IL LHS VP +QR+VF RPP G RKIVL+TNIAET++TIDD+ VI+SGR KE SYDP+ + TL + W+SKAS RQRRGRAGR + GVCFHL+S R E L D Q EL R+PL+ + V L
Sbjct: 24 VSEQSRLSIAEQLEEFQRSDE-TSYRFPPGLNNHDRAVVHAECRKYGFTSKSQGKGDSRQVTVSKPAASGQLAKDTFDLP----VSPASLEVLQAYYERHLPKEEELTAIQQGGGVTSLGAADHQVHQQ-----LGGRKRGTTTGAAHFSEQEVRRQH---AAWQKAQQAPAVTAITSTRNSLPIAPYRSDILQAIASHQVVLVAGETGCGKTTQVPQFLLEDAWAAGRGCRIMCTQPRRISAISIAERVAAERGERCG-TTVGYTIRLESKGGPASSLMFCTNGVLLRMLTQGEGLNDITHVIVDEIHERDRFADFLLILLRDLLPAHPNLRVVLMSATLHIELFSNYFGGCPVIEVPGFTHPVTDMYLEDVL---------------RLIGYQDALLGQHNGGPGRRGPPGIQQPAPGKA----AADIPKEQREAIESAIMQAFLHG-SDEHFDFLLE---------------MTGANSMDEADASGCVNVVHSSTGATALMAAAGKGRLA--------DVAALL--------TAGADPLLRSRDGSSAQDWATKFGHADIAEFLGSHMEAAQ------------ASGHVEVSALAVSQYQASTDADEVDLALIEALLMYICGEGPYRRAEEQDAALGAVLIFLPGWDEIIRLKEQLENKQSALSGSKYSILPLHSMVPAAEQRKVFKRPPVGVRKIVLATNIAETAVTIDDIVCVINSGRHKEKSYDPYTNVSTLQATWISKASERQRRGRAGRCQQGVCFHLYSRVRSEGLADFQLPELQRSPLDELSLQVKL 743
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A7S2UJW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJW6_9STRA) HSP 1 Score: 424 bits (1089), Expect = 1.550e-132 Identity = 269/680 (39.56%), Postives = 356/680 (52.35%), Query Frame = 1
Query: 508 MHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDPSIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKD-TQLVFMTPGILLKKLGNDPMLKDFTHVLIDEVHERDRNSEFLLIVLRDLVP--KRPDLRLILMSATLQQGKYSSYFGGC----------PIATIGARTFPVQAFFLEDVLVQTKYLGEIGAGDGGSLLGGSDRVLGLGLEDEREEAYE------------------------------------------CSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANAL-----LTKYQFTFDDGSVDFELIECLLRYICRSAYEEGAVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
M + +Q + + FK+M R+ LPA+ Y ++I V+ H V +++G+TGCGKSTQVPQFLLDDP+IGP+CNIV TQPRRISAI+VAER+A E+ ++ K VGY +RLESS S D TQLVF+TPGILL+KL + P L ++TH+++DEVHERDR +EFL+I L++L+ +RPDL +ILMSATLQ Y+ G +I RTFPVQ FFLED L T ++ + SD L +E E E+ C +C SGF+S +ELGTH A+C G G +G+ + + VR + + + + DG + P + +WDG F ++ L L +YQ DD VD+EL+ +++YI S+Y +GA+L+F PGW++I+ L + F D KF IL LHSG+P+ Q++VF RPPK RKI+LSTNIAETSITIDDVAFV+D+GRAKE SYDPHLK TL WVS+ASA+QR+GRAGR KAGVCFHLFS RR+ES R +SELLRTPLE
Sbjct: 1 MAAHFASQKAKRHDPSFKQMLKHRQQLPAFSYAESICKSVQSHAVTILTGDTGCGKSTQVPQFLLDDPTIGPTCNIVITQPRRISAISVAERVASEQCSSSS-KTVGYQVRLESSFSPDETQLVFVTPGILLRKLQSSPSLSEYTHIILDEVHERDRYTEFLMICLKNLLASGQRPDLHVILMSATLQTNALMEYWSGLNDTIEGFSLPAQVSIPGRTFPVQEFFLEDALAMTGFVNDDRFE--------SDMTL---VESELEKVXXXXXXXXXXXXXXXXXXXXXXXXXXKKSKDPHTLAMGGGNTLTCIMCNHSGFKSPEELGTHVALCDGGGG---------------------------------------IGMDQLEEKVREIPLHSSLLSGYDDGAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG-----------------------------TVMGKWDGESPFMVADMMSSKNTGPTLTEEEHLNRYQSMHDDEQVDYELLLAVIQYIHGSSYGDGAILIFFPGWNEISEFTMLLEGTMPFSDTSKFWILPLHSGIPSKDQKKVFQRPPKNMRKIILSTNIAETSITIDDVAFVVDTGRAKEKSYDPHLKTSTLQPVWVSQASAKQRKGRAGRVKAGVCFHLFSRRRYESFRPFLDSELLRTPLE 600
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Match: A0A7S0KL54_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KL54_9CHLO) HSP 1 Score: 417 bits (1073), Expect = 4.700e-131 Identity = 293/788 (37.18%), Postives = 413/788 (52.41%), Query Frame = 1
Query: 31 VHAVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKFIHEAVRRLGLVSKSRGKGDARFITVSKK-EAKTHGSRDSAELPPILRLGQAREEALEAYFLRHRPTERELETVMSAATGRGMNAAADLVMQKRHKAGLRDRRARAMISAGASPEQLRRRMHTYNVAQTKRENATGFKRMSALREGLPAWDYRDTIVNMVRDHQVCLVSGETGCGKSTQVPQFLLDDP-SIGPSCNIVCTQPRRISAIAVAERIAEERGEAAGGKVVGYAIRLESSVSKDTQLVFMTPGILLKKLGNDP---MLKDFTHVLIDEVHERDRNSEFLLIVLRDLVPKRPDLRLILMSATLQQGKYSSYFGGCPIATIGARTFPVQAFFLEDVLVQTKYLGEIGAGDGGSLLGGSDRVLGLGLEDEREEAYECSLCGKSGFRSAQELGTHAAICFGTAGLDPALEGYTDEGLELLMAAASGAGSPRFEGKHVSVGASVVGIGKEQSGVRVLANSAVPRAAHTDGGSGERGVNVGDGGDEVVSRIGGVNADGVNGGTKPMETEEDDEGYLDEEVAAEEDDMETGLHDALALSQRWDGRGTFRGERASATSGRANALLTKYQFTFDDGSVDFELIECLLRYICRS-AYEEG---AVLVFLPGWDDITRLGSFLRQSPHFCDEKKFQILSLHSGVPTGKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVSQWVSKASARQRRGRAGRTKAGVCFHLFSARRHESLRDHQESELLRTPLE 2367
V V E+ RI + L FR D EA+ L FPP +DN R +H ++LGL SKS GKGD R + V+K E K + D +L LG ALE YF R + T E+ ++ + A HK G R + M +P++ RR+ T ++ + A + R+ LP W+++D I+ V ++Q+ LV+G TGCGK+TQVPQ++LDD + G IVCTQPRRISA+ V+ERIA ERGE+ G VGY IRLES VS + L+F T G+LL+KL +D M + TH++IDE+HERD ++FL I+L+ ++PK P L+L+LMSAT+++ +S YFG CP+ ++ T PV F LED+L G GG GG+ ++ + A+E L E A + A L+ +DE + L++ A +VS +G L V G G VS++ G+ A T +G + A + D +E L DA+ R + +A LL+ YQ + D VD +LI L+ +I + A +EG A+LVFLPGWD+I++L L + C +L LHS V +QR+VF RPPKG RKIVLSTNIAET++TIDDV FVIDSGR KE SYD + + TL + W+S+ASA+QRRGRAGR + G C+ ++S R +S + Q E+ R+PLE
Sbjct: 15 VRPVGETARIDIHNALEQFRSDPEASELVFPPDVDNHFRAVVHAECKKLGLKSKSHGKGDERRVHVTKSTEFKPSDAEDLFDLG----LGARATSALETYFGRFQQTPEEIRLSVAGSLDAAWEEQASAEKTSSHKRG-RGASSLEMRGRSLTPDEAARRIETL-ASRVATDGALAA--IQTKRQALPVWEFKDAIIEAVANNQIVLVAGSTGCGKTTQVPQYVLDDAWARGQGAAIVCTQPRRISAMTVSERIANERGESIGQSTVGYQIRLESKVSPECSLLFCTSGVLLRKLTSDTSDKMCQSLTHIIIDELHERDLFADFLTIILKGVLPKHPHLKLVLMSATVREDLFSEYFGSCPVISVPGYTHPVTEFHLEDILPMV--------GWGGGARGGAH------VQAHAKAAHEQPLVKAPTSGPIVEQMREAIM---RAFLED-----SDEAFDWLLSCARDVDPAGLSYVNVS----------HSTGATALM------------------VAAGKGRQMEVSQLLGLGASSTMRST---------DGRTAADWAEKFDHVE--LADAI--------RSMDEENEDVGNNEQAALLLSDYQLSVDPDEVDVDLIHNLIVWIVKERAVDEGSDGAILVFLPGWDEISKLRESLTADYNICHAAT--VLPLHSMVAPAEQRKVFQRPPKGLRKIVLSTNIAETAVTIDDVVFVIDSGRLKEKSYDAYSAVSTLQAAWISQASAKQRRGRAGRVRPGECYRVYSTSRFKSFSEFQLPEMQRSPLE 723 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6139.13692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6139.13692.1 >prot_H-elongata_contig6139.13692.1 ID=prot_H-elongata_contig6139.13692.1|Name=mRNA_H-elongata_contig6139.13692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=798bp SLTSGQKGLDVHAVAESTRITLDRQLHAFRDDEEATSLAFPPALDNTSRKback to top mRNA from alignment at H-elongata_contig6139:160..9941- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6139.13692.1 ID=mRNA_H-elongata_contig6139.13692.1|Name=mRNA_H-elongata_contig6139.13692.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9782bp|location=Sequence derived from alignment at H-elongata_contig6139:160..9941- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6139:160..9941- >mRNA_H-elongata_contig6139.13692.1 ID=mRNA_H-elongata_contig6139.13692.1|Name=mRNA_H-elongata_contig6139.13692.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4788bp|location=Sequence derived from alignment at H-elongata_contig6139:160..9941- (Himanthalia elongata Himel1 dioecious)back to top |