mRNA_H-elongata_contig61286.13677.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: D7FWJ2_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ2_ECTSI) HSP 1 Score: 349 bits (896), Expect = 2.070e-114 Identity = 173/282 (61.35%), Postives = 210/282 (74.47%), Query Frame = 1
Query: 1 RATINSLSRSDSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKA-ATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVI---CTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
R T+++L R AI++VLHAGDL+YA+C +ERWDSF+ MLDPVAS +PWMVAAGNHEIEA GST G F A++HRFRMP+ PAV G ECG+ GGLDGN TACG GL D A A ++ A GE + +AVL AREA+ P+ PV ++GWPE++ GG G + + C+ SEWSGTYDFGNSFYSFDVASVHVVVLNPYTA+GEGS+Q SWL+ DL DRS TPW++ MFHCPW+NSNL H ER A TAM ME +LFQH+ +L I+GHVH
Sbjct: 192 RNTLDALGRHQPAIDVVLHAGDLAYAECIQERWDSFMRMLDPVASHVPWMVAAGNHEIEA--GSTSSGPFAAFQHRFRMPSEAPAVRGFECGVAGGLDGNRTACGPGLNDLSTKGASAKESEAAEFGGEWMTQAVLGAREAVAPFERPVSSTGWPESEGGGGEEDEGEVEGLVPKCSPSEWSGTYDFGNSFYSFDVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMHAMEPVLFQHKASLAIAGHVHA 471
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: D8LBI4_ECTSI (Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI4_ECTSI) HSP 1 Score: 288 bits (738), Expect = 5.950e-90 Identity = 157/275 (57.09%), Postives = 179/275 (65.09%), Query Frame = 1
Query: 31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAG-PAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAAN------AGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
D++I+LVLHAGDLSYADC + RWDSF+ MLDPVASR+PWMVAAGNHEIE + F AYE RFRMPA G P G CG GGGLDG+G CG G G A AA + A GEGVA RG V + T G + V C SEWSGTYD+GNSFYSFDV VHVV LNPYTA+GE S+Q SWL DL + DR+LTPW++VM HCPWYNSNL HQ ERQA TAMR ME LL QH+ A++I+GHVH
Sbjct: 203 DNSIDLVLHAGDLSYADCDQPRWDSFMRMLDPVASRLPWMVAAGNHEIETNGAYPGAKPFLAYESRFRMPAVGAPTDLGRGCGAGGGLDGDGYLCGEGWGADEADAAAIEEAERLSSPVGTRGGEGVAAGNTVGAAVRQAARG--VRMAFDAT---GEGSEDEQPPVSCCPSEWSGTYDYGNSFYSFDVGPVHVVALNPYTATGENSVQYSWLQKDLESADRALTPWLVVMMHCPWYNSNLAHQGERQAETAMRAMEPLLHQHKAAVVITGHVHA 472
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A6H5KE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE14_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.780e-79 Identity = 126/221 (57.01%), Postives = 158/221 (71.49%), Query Frame = 1
Query: 184 AGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGD-TVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVI---CTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
AGST G F A++HRFRMP+ PAV G ECG+ GGLDGN TACG GL D + + ++ A GE + +AVL AREA+ P+ PV ++GWPE++ +GG G + C+ SEWSGTYDFGNSF DVASVHVVVLNPYTA+GEGS+Q SWL+ DL DRS TPW++ MFHCPW+NSNL H ER A TAMR ME +LFQ++ +L+++GHVH
Sbjct: 7 AGSTTSGPFAAFQHRFRMPSEAPAVRGFECGVAGGLDGNRTACGPGLNDLSTKGTSVKESEAADFGGEWMTQAVLGAREAVDPFERPVSSTGWPESEGEGGEEDEGEVDGLVPKCSPSEWSGTYDFGNSF---DVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMRAMEPVLFQNKASLVVAGHVHA 224
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A835YVM8_9STRA (Purple acid phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM8_9STRA) HSP 1 Score: 219 bits (557), Expect = 6.990e-65 Identity = 122/263 (46.39%), Postives = 151/263 (57.41%), Query Frame = 1
Query: 46 LVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
+VLHAGDL+YADC+++RWDS+ + + A+R+PWM AAGNHEIE + + + FTAYE R+ MPAA P V A + +A GEG V H + + + K A QAG CT SEW G YDFGNSFYSFDVA+ HVVVLNPYT + GS QQ WL ADL A DRS+TPW+IV+ HCPWYNSN HQ E QA+ +ME ++ R AL+ISGHVH
Sbjct: 144 VVLHAGDLAYADCEQDRWDSYGRLAEAAAARVPWMTAAGNHEIELEPSTGLA--FTAYEARYAMPAARPPVV----------------------------RAPPSMSAAATGEGGDSPVGHEGSNFVDKK---------QIK----ARQAGG--YACTPSEWLGRYDFGNSFYSFDVATAHVVVLNPYTPARAGSPQQRWLAADLAALDRSVTPWLIVITHCPWYNSNFAHQLESQAVAMKESMEGMIADARAALVISGHVHA 361
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A7S2CG88_9STRA (Purple acid phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG88_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.530e-52 Identity = 100/265 (37.74%), Postives = 129/265 (48.68%), Query Frame = 1
Query: 40 IELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
I VLHAGDL+YADC++ RWDS+ M+ P ASR+PWMV GNHEIE D G FTA+E RFRMPA AV +A P G CT SE+ G YD+GNSF+SFD VH++ +N YT + GS Q W+++DL A +R TPW+ V+FHCPWYNS+ DHQ E QA++ +E + +RV + +GHVH
Sbjct: 137 IAAVLHAGDLAYADCKDTRWDSWSQMVQPAASRLPWMVCPGNHEIETD--KFTGATFTAFEARFRMPAVAQAV----------------------------------------------------QAPSPTEGE------------------------CTPSEFMGVYDYGNSFFSFDYGPVHIIFMNSYTNASAGSAQYGWVVSDLSAVNRVKTPWVFVLFHCPWYNSDDDHQDEFQAVSMQAALEPVFLNYRVNAVFTGHVHA 323
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A482RNP1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNP1_9ARCH) HSP 1 Score: 167 bits (423), Expect = 1.020e-45 Identity = 90/265 (33.96%), Postives = 130/265 (49.06%), Query Frame = 1
Query: 40 IELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
+ ++LHAGDLSYADC + WD + +++ +A PWMV GNHEIE + T G F A+E R++MPA PA G + + TD +SG P C +S + Y++GNSFYSF+ S HV+ LNPY+ + S+Q +WL+ DL +R +TPW+IV+ HCPWYNSN H E QA+ +ME + +++RV ++ +GHVH
Sbjct: 98 LSMILHAGDLSYADCNQPVWDQYGVLIEDLAKLRPWMVGPGNHEIEFN---TDGSTFLAFEERYKMPAIKPAEIGK----------------------ITIPPGTD------------------------------SSGHP----------------YCASSVFQQDYNYGNSFYSFEAGSAHVIFLNPYSTTDASSVQYNWLVQDLQGVNREVTPWVIVVMHCPWYNSNQAHYGELQAVLMRESMEEVFYKNRVNIVFTGHVHA 291
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A812QP08_SYMMI (Purple acid phosphatase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QP08_SYMMI) HSP 1 Score: 159 bits (401), Expect = 3.970e-41 Identity = 98/272 (36.03%), Postives = 132/272 (48.53%), Query Frame = 1
Query: 31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDR--SLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT--MESLLFQHRVALIISGHVHG 834
D +++++LHAGD++YAD + RWDS+ ++P++SR+ WMV GNHEIE+D + G F AYE RF MPA PA E+ R S WP G CT S +SG+YD+GNSFY+ D V+ LN YT +G S Q +WL +L A R + TPW+IVM HCP+Y+SN+ HQ+E QA+ E LL H A++ISGHVH
Sbjct: 169 DRSLQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYT--GESFKAYEARFAMPAVQPA-----------------------------------------------------ESRPSKRQIGCQSPWPRGSHPG---------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAIEMRDAHGFEDLLHAHAAAVVISGHVHA 376
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A1Q9EB14_SYMMI (Purple acid phosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EB14_SYMMI) HSP 1 Score: 159 bits (401), Expect = 3.800e-40 Identity = 98/272 (36.03%), Postives = 132/272 (48.53%), Query Frame = 1
Query: 31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDR--SLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT--MESLLFQHRVALIISGHVHG 834
D +++++LHAGD++YAD + RWDS+ ++P++SR+ WMV GNHEIE+D + G F AYE RF MPA PA E+ R S WP G CT S +SG+YD+GNSFY+ D V+ LN YT +G S Q +WL +L A R + TPW+IVM HCP+Y+SN+ HQ+E QA+ E LL H A++ISGHVH
Sbjct: 169 DRSLQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYT--GESFKAYEARFAMPAVQPA-----------------------------------------------------ESRPSKRQIGCQSPWPRGSHPG---------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAIEMRDAHGFEDLLHAHAAAVVISGHVHA 376
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A024UBB1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBB1_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.980e-40 Identity = 97/269 (36.06%), Postives = 124/269 (46.10%), Query Frame = 1
Query: 31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT-MESLLFQHRVALIISGHVHG 834
+SA+ VL AGDLSYAD + RWD++ ++++P S IPWM+AAGNHEIE ST F AY+ R+RMP A ++ A++ GN FYSFDVASVHVVVL PY + GS Q W+ DL DRS+TPWI+VM H PWY+SN HQ++ + AMR ME LLF HRV L+++GHVH
Sbjct: 26 NSAVRAVLLAGDLSYADTVQTRWDTWGSLVEPSTSCIPWMMAAGNHEIETSCHSTT---FDAYQARYRMPFA---------------------------------------------------------------------------------ESNASR--------------GNLFYSFDVASVHVVVLTPYLPTYRGSAQYKWVGRDLERVDRSVTPWIVVMMHGPWYSSNRAHQSKVEPQHAMRKDMEDLLFDHRVHLVLAGHVHS 196
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A024UCE4_9STRA (Purple acid phosphatase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCE4_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.420e-38 Identity = 97/269 (36.06%), Postives = 124/269 (46.10%), Query Frame = 1
Query: 31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT-MESLLFQHRVALIISGHVHG 834
+SA+ VL AGDLSYAD + RWD++ ++++P S IPWM+AAGNHEIE ST F AY+ R+RMP A ++ A++ GN FYSFDVASVHVVVL PY + GS Q W+ DL DRS+TPWI+VM H PWY+SN HQ++ + AMR ME LLF HRV L+++GHVH
Sbjct: 185 NSAVRAVLLAGDLSYADTVQTRWDTWGSLVEPSTSCIPWMMAAGNHEIETSCHSTT---FDAYQARYRMPFA---------------------------------------------------------------------------------ESNASR--------------GNLFYSFDVASVHVVVLTPYLPTYRGSAQYKWVGRDLERVDRSVTPWIVVMMHGPWYSSNRAHQSKVEPQHAMRKDMEDLLFDHRVHLVLAGHVHS 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61286.13677.1 >prot_H-elongata_contig61286.13677.1 ID=prot_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp RATINSLSRSDSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMback to top mRNA from alignment at H-elongata_contig61286:194..3435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61286.13677.1 ID=mRNA_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3242bp|location=Sequence derived from alignment at H-elongata_contig61286:194..3435+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61286:194..3435+ >mRNA_H-elongata_contig61286.13677.1 ID=mRNA_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1704bp|location=Sequence derived from alignment at H-elongata_contig61286:194..3435+ (Himanthalia elongata Himel1 dioecious)back to top |