mRNA_H-elongata_contig61147.13661.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 266 bits (679), Expect = 8.510e-78 Identity = 167/417 (40.05%), Postives = 229/417 (54.92%), Query Frame = 3
Query: 540 LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYD---GYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQ--PAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRYGPRD----------AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWP-------SDGKEFGVIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
+GM ++ + + E +L +++WCPG P LEL YR SRDG+N F+ +C + PST+TLL V +G S+IGGFSSV W P + GY + + SPGAF+F++K + +G P W + G A V + GP FG +V +N + + +V G+ FL+L + + ++E +RV P A G + T ++ FG IA LME + L +A EL LAK A A AL +VYGP +ASG+ + VVEL V GT MTTLRSTLR CP+SALAARFD+ KWP SDG+ +IDC PA+F+KVLDVLR+ KRA W+ + + +K +RV I GDR + EEFVDMYF GC+ F+M V G
Sbjct: 175 VGMSIQGGTTIFEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGY-------YLRGSPGAFVFILK---DEGKGSSTFPPMKWGVKNGLAAKAVNQ---GCGPCFGECDLKVNWNGNMSTVGTDNSTYDVPAGSH--FLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAGEGTNTPTAPVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRR--MIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFIMAHVCLPG 574
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 260 bits (664), Expect = 7.260e-76 Identity = 182/447 (40.72%), Postives = 241/447 (53.91%), Query Frame = 3
Query: 474 LSVDQRPYLLNIARVLRLDT--PFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGG---CQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFN--VPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVR---------------YGPRD---AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
L++D+ YL +AR L L P GMEV + LS E+ EL ++ WCPG+P + L YR SRDG++ FH C + P+TITLL V G+ S++GGFSSV W P AY G DS S GAFIFM+K +++ GG QP W V+ GP FG V FN P + ++ + S T F L + + E+EV++V GP D A S S T + ++ FG +IAG LMEER+AL AE EL A + A+ AL +VYGP +A G D+VVEL V GTRMTTLRSTL+AC ESALAA F++ KWP K+ +I+CSPA+F KVLDVLR+RKRA W+ R + + V + DR + + FV+MYFPG ++F+ D V QG
Sbjct: 127 LALDEMVYLPYVARALGLSAYIPRQGMEVVGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRV-----GASQSIVGGFSSVPWSPHAYGG-DSI------MSSLGAFIFMLK---DSDMGGPNSFQPVKWGKRDNNGGCDVVV-GASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGST---FPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDR----ELAHVRVDAADRPAFDSFVNMYFPGFENFITDMVVPQG 550
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 256 bits (655), Expect = 1.020e-74 Identity = 176/441 (39.91%), Postives = 237/441 (53.74%), Query Frame = 3
Query: 483 DQRPYLLNIARVLRLDTPFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSW--VPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLP-RGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRY-------------GPRD-AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTR----MTTLRSTLRACPESALAARFDDSKWPSDGKEFG------VIDCSPAIFAKVLDVLRLRKRAEWSKQ--KRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSF 1718
D++PY+ +A L LD LGM V S L E E L I WCPG P+ LEL YR SRDG++ + H +C D+ PSTI+L V + + S++GGFSSV W +P G DS F+F++K G+E E QPA W L R P P +D + G G +V N+ + + + F+ L + + ++EV+RVR G D AA ++ + N+ FG SIAG L +ER AL A+ EL+ A T A+ AL +VYGP+ A+G D +VEL V G+R MTTL STL+ACPESALAARFD++KWP K+ + DCSP++F+KVLDVLR++KR W+ K A V V I + DRA EEFV+MYFPGC+ F+MD V F
Sbjct: 114 DEKPYIGGVASALGLD---LGMTVPGGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTALPPENRGLDS-------------FLFILKDGIE-ESHNFQPAIWGLRIRNPK--PSGAYDMEKFGLIFGRGRIFDLSVVWTNQTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQTMGTLPTTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGAAVL---VAIKDADRAPFEEFVNMYFPGCESFIMDSVKF 532
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 251 bits (642), Expect = 7.690e-73 Identity = 172/428 (40.19%), Postives = 235/428 (54.91%), Query Frame = 3
Query: 474 LSVDQRPYLLNIARVLRLDT--PFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGG---CQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFN-VPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRYGPRDAASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
L+ D+ YL ++AR L L P GMEV + +LS E+ EL ++ WCPG+P ++L YR SRD ++ FH C + P+TITLL V G+ +S++GGFSSV W P AY G DS S GAFIFM+K +++ GG QP WS + V+ GP FG V F VP + ++ + S + F L + + E+EV++V + N +IAG LMEER+AL AE EL A + + AL +VYGP +A G D+VVEL V GTRMTTLRSTLRAC ESALAA F++ KWP+ K+ +I+CSPA+F KVLDVLR+RKRA W+ R + + V + DR + + FV+M+FPG ++F+ D V QG
Sbjct: 149 LAPDEMAYLPHVARALGLSAYIPLQGMEVVGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRV-----GASASIVGGFSSVPWSPHAYGG-DSV------MSSLGAFIFMLK---DSDMGGPNSFQPVKWSKRDNNGGYDVVV-GASRGPFFGRTDLVVNFTYVPVTLQAQPYSYDVPS---VPAFPNLNGQTITEIEVFQV-------------------NICN------AIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRES----AHVRVDAADRPAFDSFVNMFFPGFENFITDMVVPQG 528
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 228 bits (582), Expect = 3.020e-64 Identity = 164/451 (36.36%), Postives = 225/451 (49.89%), Query Frame = 3
Query: 459 THPVPLSVDQRPYLLN-IARVLRLDTPF--LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEI-PSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGG-GCRVTFNVPCKNECSIFAGENVSEG-TMTPFLELQRKRVFEMEVYRVRYGPRD------------AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSK---------QKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVS 1715
T +S D +P L + ARVL L +GM +K + E +L ++ WCPG+P +C D+ P+TIT L V + + +IGGFSS+ W YD + + SPGAF+FM+K G G Q W + G + + V R GP FG G V +N E ++ G T +PF EL R+ ++E +RV GP+ A K+G ++ FG +A LMEE L A +EL LAK A A A+ +VYGP +A+G D VVEL+V GTRMTTLRSTLR CP+SALAA F++ +WP K+ +IDC P++F+KVLDVLR+ KRA W++ ++RV RV I GD A+ EEFVDMYFP C+ F+M+ V
Sbjct: 99 TGEADMSRDDQPDLFHHTARVLGLSGQLAPVGMTIKGGTTTFDPHEASKLTAVVQRWCPGNP---------------GAACQDRCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYD-----SDAGYYSPSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQ-GYGPCFGEGRDLHVVWN---GTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRV--GPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKP----RVTIKAGDCAAFEEFVDMYFPCCETFMMEHVD 519
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 209 bits (531), Expect = 7.350e-57 Identity = 152/379 (40.11%), Postives = 203/379 (53.56%), Query Frame = 3
Query: 657 RGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNE-----CSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVR------YGPRD-AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTR----MTTLRSTLRACPESALAARFDDSKWPSDGKEFG------VIDCSPAIFAKVLDVLRLRKRAEWS---KQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSF 1718
R SRD ++ + FH +C D+ PSTI+L V+ + + SV+G FS V W ++ E++ SPG+F+FM+K G E + QP+ W P+ V+ T+ D+ V C + C I+ T PFL + V ++EV+RV G D AA K + N+ FG SIAG L +ER AL A+ EL+ A T A+ AL +VYGP IA+G D VVEL V G R MTTL STL+ACPESALAARFD++KWP KE + DCSP +FAKVLDVLR++KR W+ K+ R A + V I DRA E+FV+MYFP C+ F+MD V F
Sbjct: 175 RASRDSWSDHAFHARCGDDSPSTISLFCVEAQGANNSDSVVGRFSVVPWT--------ASPEFSPVLPSPGSFLFMLKDGNEGSDA-VQPSKWG-PKVGYTGQVVDGRTEGPVDW----------VMCLHRMFTVHCGIY-----DIPTEHPFLYHMGREVVDIEVFRVLPTSLTVTGLIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRAAVL----VAIKAADRAPFEKFVNMYFPACESFIMDSVKF 524
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI) HSP 1 Score: 199 bits (507), Expect = 2.450e-53 Identity = 156/447 (34.90%), Postives = 219/447 (48.99%), Query Frame = 3
Query: 474 LSVDQRPYLLNIARVLRLDTPFL--GMEVKSK-SAVLSTS-ELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYS--GSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCK------NECSIFAGENVSEGTMTP-----------FLELQRKRVFEMEVYRVRYGPRDAASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCG----TRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG---VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
L D++ YL ++ L + +P V S+ SA+L EL+ L + +WCPG+P+ L+L YR SRDG++ FH +C D+ P T+TL ++ + G SV+G FSSV W P + DGY K SPG F+F++ G + P VHP G G G +F+V + S +G N T FL+ V E+EVYRV + + + ++ FG SIA EE AL A+ +L+ A A+A AL +VYGP +AS D VV+ V G TR+TTLRSTL+ CP L AR D SKW + + G + DCSPA+F+KVLDVLR++KRA W + + VV+ DR + E+ V MYFPGC+ ++D V F G
Sbjct: 102 LPTDEQAYLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLNDASNRKGLNCSVLGCFSSVPWTPPS-DGYTKL------KSSPGGFVFILTDGSRSFR----------PTKLKVHPHYA-KRGCGLVVLGEGSMPSFHVDLEVFHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRV-------------WSAEEERSDDIHRFGGSIAASFEEEHKALHKAQSKLVEATEKGAASASALAAVYGPGVASNSRDPVVDFSVRGSRTTTRITTLRSTLQLCPY--LVARLDQSKWTENKDKHGRWLIKDCSPAVFSKVLDVLRMKKRAGW-----IGGEVKAHVVVKATDREAFEQAVGMYFPGCERVILDHVEFLG 510
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 187 bits (476), Expect = 7.020e-48 Identity = 160/477 (33.54%), Postives = 229/477 (48.01%), Query Frame = 3
Query: 474 LSVDQRPYLLNIARVLRLDTPF------LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAH-WSLPRGP---AVHPVIRWDTDVGPDFGGGGCRVTFNVP----CKNECSIFAG-ENVSEGTMTPFLELQRKRVFEMEVYRV----RYGPRDAA-------SGKSGGTKRKWKVNNTGL-----------FGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPD--SVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWP----SDGK--EFGV-----------IDCSPAIFAKVLDVLRLRKRAEW-SKQKRVATVKFS------RVVITEGDRASLEEFVDMYFPGCKDFVMDWVS 1715
++ + PYLL I+ VL L GM V + + +L + +R+WCPGDP L L YR SRDGF+ F +C + TITL+ V G SV+GGFS + VP N S AF+F+ L++ GG A WS+ G A+H D GP FG VTF+ + C++ G E +PF+ L K V E+E++RV R +D A KRK ++ FG+S+A +LMEE++AL+ A+ EL AK A A AL VYGP +AS + + +VVEL V G +TTLRSTL ACP+SA + + P DG+ + G+ +DC P+ F+K+LDV+R+RKRA W + ++ A ++ + R+ + E DRA + V FP C+DFVMD +
Sbjct: 158 VAAHEEPYLLYISHVLGLSNVIPACPNTKGMVVAGGTTTANPLQLPQWSSLLRSWCPGDPAGLHLLYRASRDGFSTGPFQ-QCVRGVCETITLIRVKSD-DGRPDSVVGGFSDIEIVPQEVGMETGNQR------SSSAFLFL----LDSPGGGFPTAKKWSIKEGEDSCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQFGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMDMIE 622
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 164 bits (416), Expect = 4.010e-41 Identity = 139/443 (31.38%), Postives = 196/443 (44.24%), Query Frame = 3
Query: 474 LSVDQRPYLLNI-ARVLRL---DTPFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTP--FLELQRKRVFEMEVYRVRY-GPRDAASGKSG------------GTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDS-VVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSK-QKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
L+ D +P LL ARVL L PF M ++ +L E + L ++ WCPG P LEL YR SRDG++A F KC D PSTI+L + G++S A +F + ++ + P G RV + V S +N+++ L L + V ++E +R+ Y P DA S R + + FG IA LMEE + L A +EL +A+ A A AL VYGP +A G+ + VVEL VCGTR+T + STLR CP S A +F + +WP+ K+ VIDC P++F+KV+D+LR A W++ K RV I DRA EEFVD+YF GC+ +M++V G
Sbjct: 90 LAPDDKPELLYYTARVLGLRGQSAPF-DMPMRGGPNILEPHETKRLTAIVQGWCPGHPGGLELLYRASRDGWSARSFDDKCRDGSPSTISL--------------------------PFSGFESR-----------ADLFTIS------------------------TIVLFS--AAPGNGMCDLRVVWKV---GAASTVQTKNLTQDVQAESRLLALNGRGVVDIETFRLCYCRPTDALSSAKPKHHFIGDIAVPTAPVRSRLLRMSFPFGRLIADALMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYVESLG 460
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 155 bits (391), Expect = 8.460e-41 Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 3
Query: 1254 MEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFS-RVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
ME + L A EL AK A A AL +VYGP +A+G+ + VVEL V GT M TLRSTLR CP SALAARFD+ KWP+ K+ VIDC P++F+KVLDVLR+ KR W+ +++ + + RV I GDR + EEFVDMYF GC+ F+M+ VS G
Sbjct: 1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKGCESFIMEHVSLLG 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61147.13661.1 >prot_H-elongata_contig61147.13661.1 ID=prot_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp MSRRSINEKAVFTVSTDACSKELQAALSNWRAYLDRAWDTLDDGWKELEKback to top mRNA from alignment at H-elongata_contig61147:439..2187+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61147.13661.1 ID=mRNA_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1749bp|location=Sequence derived from alignment at H-elongata_contig61147:439..2187+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61147:439..2187+ >mRNA_H-elongata_contig61147.13661.1 ID=mRNA_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at H-elongata_contig61147:439..2187+ (Himanthalia elongata Himel1 dioecious)back to top |