mRNA_H-elongata_contig6108.13655.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A6H5KJ57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ57_9PHAE) HSP 1 Score: 663 bits (1710), Expect = 9.530e-229 Identity = 358/627 (57.10%), Postives = 439/627 (70.02%), Query Frame = 1
Query: 37 MYHPTALLWLIISSTFIRSLNSFEPPCSPTCSKFNEEICKGLTNKRRCFLSGSDSLLLPRATHRIVGSSSPWDGRRPVRSLRRLHFVSSKSLTGDDLEDPTQEYVRPQGCVLAPHDPNIQAFEEWTIQ---QGSRGDLAHADFEGLRGLMAKKAVAAWKPVATVPSSILLQE------CSMATGASIPTS-----------PPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKN--SALVNALADPTAFSWALECVLSRAFQLPPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHMYWEDDGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWLREDGFLGANLSSKFLACAGAREAWRYLRQGVILRDAIHPSTLQAMRVICCEGTTDYTQSGKVESRLWDGTEADLERFGSPVSLASELASFELLMRYSAREADAWAESGVAAATVEDPTAPGLDTDLDGLGLDADRQLMLSVFRKEKLMLLRSIVSRLTHMSKISNMLNRPITMPVVRSPPQVLG 1851
M +LL L ++ ++ F SP S ++ C T +R S + + + P +I S+ GRR R L L + + G + P GC APH+P +QAFE WT + +GS G L+HADF+GL GLM K AV W+P+ATVP S+ L+E CS AS + PP PLSV+AW+RCPWWVRLGVRLLKE++ GEGS+ +EY+ +LP+ G +GAPL+WS+EQL RL+YPRLLSQI +QRRLF+ F+++LLAD S RE + + LV+ALADP FSWALECVLSRAFQLPP AAA V EE DVP++AP + P AP+++ MALLPLIDS+NHYSR+PTHMYWE DGA+SL+VGA + GDHAF SYGPVSNDDLLQ+YGFVERDNPSDTYVL+DMGKWLREDG LGA+LSS+ LAC AR WRYLR+GVILRDA+HP+T+QA+R++ CE +G WDGTEADL RF +P+SLASE A+FELLMRYSAREAD W ++GVAAA EDP APGLD DLDGLGLD DR+LMLSVFR EK+ LLR IV RLTHM K+S++LNRPI MPV SPP VLG
Sbjct: 1 MTQHISLLLLTLAISYQHPAVGFSLCRSPAASSSSK--CSA-TQRRNRAASAARARIPPSRCGQIAPPSA---GRRR-RPLSALSAATDEPAAGAAAQVDEAAGEPPTGCERAPHEPAVQAFEGWTARAGCRGSSGSLSHADFDGLPGLMTKVAVPPWQPIATVPESLFLREEFLFVPCSPTAAASDAGAAAGTERTQRLPPPPPLSVEAWQRCPWWVRLGVRLLKERADGEGSRLQEYVGMLPRPGETGAPLNWSAEQLDRLYYPRLLSQIKIQRRLFEGFRKVLLADARRGDNAPSTREGDCVNRLVSALADPAMFSWALECVLSRAFQLPPRGAAALVVEEGDDVPVKAPEVTPPAPDEMTMALLPLIDSINHYSRMPTHMYWEADGALSLSVGAAFDPGDHAFASYGPVSNDDLLQYYGFVERDNPSDTYVLEDMGKWLREDGLLGADLSSRLLACPAARNVWRYLRRGVILRDAVHPATMQAVRIVACEAAG--LSAGGESELSWDGTEADLSRFTAPISLASENAAFELLMRYSAREADDWGKAGVAAALAEDPAAPGLDGDLDGLGLDTDRRLMLSVFRLEKIALLRGIVGRLTHMRKVSDLLNRPIKMPVSGSPPPVLG 618
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: D8LC97_ECTSI (Protein N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC97_ECTSI) HSP 1 Score: 599 bits (1545), Expect = 5.550e-206 Identity = 308/478 (64.44%), Postives = 368/478 (76.99%), Query Frame = 1
Query: 475 MAKKAVAAWKPVATVPSSILLQE------CSMAT-----GASIPTSPPEPL------SVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSA--LVNALADPTAFSWALECVLSRAFQLPPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHMYWEDDGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWLREDGFLGANLSSKFLACAGAREAWRYLRQGVILRDAIHPSTLQAMRVICCEGTTDYTQSGKVESRLWDGTEADLERFGSPVSLASELASFELLMRYSAREADAWAESGVAAATVEDPTAPGLDTDLDGLGLDADRQLMLSVFRKEKLMLLRSIVSRLTHMSKISNMLNRPITMPVVRSPPQVLG 1851
M K AV W+P+ATVP S+ LQE CS GA+ T +PL SV+AW+RCPWWVRLGVRLLKE++ GEGS+ ++Y+ +LP+ G +GAP++WS+EQL RLHYPRLLSQI LQRRLF+ F++ LLAD S RE + LV+ALADP FSWALECVLSRAFQLPP +AAA V EE DVP++AP + P AP+++RMALLPLIDS+NHYSR+PTHMYWE DGA+SL+VGA + GDHAF SYGPVSNDDLLQ+YGFVE+DNPSDTYVL+DMGKWLREDG LG +LSS+ LAC AR+ WRYLR+GVILRDA+HP+T+QA+R++ CE +G WDGTEA L RF +PVSL SE A+FELLMRYSAREAD W ++GVAAA EDP AP LD DLDGLGLD DR+LMLSVFR+EK+ LLR IV RLTHM K+S++LNRPI MPV SPP VLG
Sbjct: 1 MTKDAVPPWQPIATVPESLFLQEDFLFAPCSGTAAAADAGAAADTERTQPLPXXXXLSVEAWQRCPWWVRLGVRLLKERADGEGSRLQDYVGMLPRPGETGAPVNWSAEQLDRLHYPRLLSQIKLQRRLFEGFRKFLLADARRGDNAPSTREGDGVNRLVSALADPAMFSWALECVLSRAFQLPPRSAAALVVEEGDDVPVKAPEVTPPAPDEMRMALLPLIDSINHYSRMPTHMYWEADGALSLSVGAAFDPGDHAFASYGPVSNDDLLQYYGFVEQDNPSDTYVLEDMGKWLREDGLLGTDLSSRLLACPAARDVWRYLRRGVILRDAVHPATMQAVRIVSCEAAG--LSAGDESELSWDGTEAGLSRFTAPVSLVSENAAFELLMRYSAREADDWGKAGVAAALAEDPAAPRLDGDLDGLGLDTDRRLMLSVFRQEKIALLRGIVGRLTHMRKVSDLLNRPIKMPVSGSPPPVLG 476
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A6H5KDV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV2_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.920e-29 Identity = 111/361 (30.75%), Postives = 158/361 (43.77%), Query Frame = 1
Query: 400 FEEWTIQQGSRGD-LAHADFEG-----LRGLMAKKAVAAWKPVATVPSSILLQECSMATGASIPTSPPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQ----------------LPPSTAAAPVFEEDGDVPIRAPALEP-------------SAPEDVRMA-----LLPLIDSMNHYSRIPTHMYWED-DGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWLREDGFLGANLSSKFLACAGA 1359
FE W Q G R L H F LRGL A +A + + + TVP+ + S+ S P +S + W+ W+V+L ++LL E+ G S Y+ +LP +G +HW+ ++L L Y R + QR + + L+A R+ WALECVLSRAF S AA V E+ V + A AL P S D + A L+P +DSMNH + T + + G + ++V G+ A++SYG SND+LLQFYGFVE D P+DTYVL D+ K L G G + + + GA
Sbjct: 85 FERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAI---SLTASESTPFR--SWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPVQGSFETLIHWTDQELDTLKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDD-------------LVWALECVLSRAFNGRFGGGQKSAVLSAGLFAASGAAYAVTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAAASDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGA 427
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A7S3XNH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNH5_HETAK) HSP 1 Score: 121 bits (304), Expect = 1.050e-24 Identity = 100/353 (28.33%), Postives = 157/353 (44.48%), Query Frame = 1
Query: 382 DPNIQAFEEWTIQQGSRGD-LAHADFEGL----RGLMAKKAVAAWKPVATVPSSILLQECSMATGASIPTSPPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAF---------------QL---------------PPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHMYWED-DGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDT-------YVLQDMGKWLREDG 1311
D ++ FE W + + D L H FE L +G+ A V A K + +P +++T S P +S W++ P ++RL ++LL EK GE S + Y+++LP +W+ E+L L YP L + + QR+ + + L++ + P +WAL CVLSRAF QL P AAA G + A++P + + LLP+IDS+NH + + T + + + ++V ETG+ F+SYG +ND+LLQF+GFVE+ NP+D YV D + LR +G
Sbjct: 60 DTIVKDFENWAQNKNIKFDGLRHEQFEFLGSKIQGIKALGKVDAGKQLVQLPKKF-----TISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSS-------------SPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGLYVAQDSPWGLAAAAALALPGTLQEARTAMDPELQKS-ELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVWAFALSDYVDPDRAELLRREG 393
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A7S3XME2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XME2_HETAK) HSP 1 Score: 121 bits (304), Expect = 1.070e-24 Identity = 100/353 (28.33%), Postives = 157/353 (44.48%), Query Frame = 1
Query: 382 DPNIQAFEEWTIQQGSRGD-LAHADFEGL----RGLMAKKAVAAWKPVATVPSSILLQECSMATGASIPTSPPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAF---------------QL---------------PPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHMYWED-DGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDT-------YVLQDMGKWLREDG 1311
D ++ FE W + + D L H FE L +G+ A V A K + +P +++T S P +S W++ P ++RL ++LL EK GE S + Y+++LP +W+ E+L L YP L + + QR+ + + L++ + P +WAL CVLSRAF QL P AAA G + A++P + + LLP+IDS+NH + + T + + + ++V ETG+ F+SYG +ND+LLQF+GFVE+ NP+D YV D + LR +G
Sbjct: 60 DTIVKDFENWAQNKNIKFDGLRHEQFEFLGSKIQGIKALGKVDAGKQLVQLPKKF-----TISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSS-------------SPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGLYVAQDSPWGLAAAAALALPGTLQEARTAMDPELQKS-ELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVWAFALSDYVDPDRAELLRREG 393
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A8J4F2B9_9CHLO (SET domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F2B9_9CHLO) HSP 1 Score: 119 bits (297), Expect = 1.870e-24 Identity = 108/387 (27.91%), Postives = 164/387 (42.38%), Query Frame = 1
Query: 382 DPNIQAFEEWTIQQGSR--GDLAHADFEGLRGLMAKKAVAAWKPVATVP--SSILLQECSMATGASIPTSP-PEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQLP-PSTAAAPVFEEDGDVPIRA----------PALEPSAPEDVRM----------------ALLPLIDSMNHYSRIPTHMYWEDDG-AVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWLREDGFLGANLSSKFLACAGAREAWRYLRQGVILRDAIHPSTLQAMRVI 1443
D QAF W S + + F G+RGL A +A + VP S+++L A +P P+ ++ D W+ PW+ ++ +L K G S ++ LP + +G P+ WS Q+ L YP L+ Q+ Q+R +Q+ L++ ++ + RE F WA+ CV SR F P + G V + A P SA V + A+ PLID NH S + + + + G + S+ G+ F+SYGP SND L+Q+YGF E +NP D YV+ DM +W+ +G A A A L+Q VI R LQA+R +
Sbjct: 61 DSRTQAFMSWARGPASIRFSGVRPSTFAGVRGLAASSDIATDALMVEVPRHSAVVL--------APKQRNPCPDMVTDDWWKSAPWFAKIAAMILWHKRRGSQSPLASWVAQLPAD--TGVPVRWSERQIAALQYPHLIRQVTEQQREWQQLYDDLVSKGTPSSAQPPTRED-------------FIWAMSCVRSRTFSGPYVGSTLQDRLRTGGLVAVLALGNTVLGLADPQKTLSAAIAVLLFNVLYEVILSRSLKQYAICPLIDFFNHSSAVQSEVSYNYFGDSYSVVASREFTKGEQVFISYGPQSNDSLMQYYGFAEANNPQDVYVMTDMLRWVTAVQPVGQTRLDALKASALAGS----LQQVVIQRAGFPAEALQAVRFL 420
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A8J4FZN4_9CHLO (SET domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FZN4_9CHLO) HSP 1 Score: 118 bits (296), Expect = 2.620e-24 Identity = 121/439 (27.56%), Postives = 185/439 (42.14%), Query Frame = 1
Query: 382 DPNIQAFEEWTIQQGSR--GDLAHADFEGLRGLMAKKAVAAWKPVATVP--SSILLQECSMATGASIPTSP-PEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQLP-PSTAAAPVFEEDGDVPIRA----------PALEPSAPEDVRM----------------ALLPLIDSMNHYSRIPTHMYWEDDG-AVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWLREDGFLGANLSSKFLACAGAREAWRYLRQGVILRDAIHPSTLQAMRVICCE------GTTDYT------QSGKVESRLWDGTEADLERFGSPVSLASELA 1563
D QAF W S + + F G+RGL A +A V VP S+++L A +P P+ ++ D W+ PW+ ++ LL KS G S ++ LP + +G P+ W+ Q+ L YP L++Q+ Q+R +Q+ L+ + RE F WA+ CV SR F P + G V + A P SA V + A+ PLID NH S + + + + G + S+ + G+ F+SYGP SND L+Q+YGF E +NP D YV+ DM +W+ +G + A A A L+Q VI R LQA+R + G + ++ Q ++ L D +LE+ GS SL ++A
Sbjct: 64 DWRTQAFMSWARGPASIRFAGVRPSTFAGVRGLAASSDIAPEALVVEVPRRSAVVL--------APKQRNPCPDMVTDDWWKSAPWFAKMAAMLLWHKSRGSQSPLALWLAQLPAD--TGVPVRWNERQIAALQYPHLITQVKEQQREWQQLYDDLVNKGTPPGAQPPPRED-------------FIWAMSCVRSRTFSGPYVGSTLQDRLRTAGLVAVLALGNTVLGLADPQKTLSAAIAVLLFNVLYEVILSRSLRQYAICPLIDFFNHSSAVQSEVSYNYFGDSYSVVASREFKKGEQVFISYGPQSNDSLMQYYGFAEANNPHDVYVMTDMLRWVTAVRTVGQSRLDALRASALAVS----LQQVVIQRAGFPAEALQAIRFLMASDKEAAAGISSFSKPVSPDQEAQLALVLADVVRRELEQLGS--SLQEDMA 473
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: M2YA31_GALSU (Ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2YA31_GALSU) HSP 1 Score: 117 bits (294), Expect = 3.500e-24 Identity = 87/330 (26.36%), Postives = 149/330 (45.15%), Query Frame = 1
Query: 334 PTQEYVRPQGCVLAPHDPNIQAFEEWTIQQGSRGDLAHADF--EGLRGLMAKKAVAAWKPVATVPSSILLQ-----ECSMATGASIPTSPPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQLPPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHMYWED-DGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVLQDMGKWL 1299
P+ +P L + F W ++ D +GLRG++A + + + VP + LQ EC+M+ E + + W + W+V+L ++LLKEK G+ S ++ YI+ILP +G ++WSS +L +L Y L+ ++ + + + + ++ + EK + F WAL+ V SRAF +P DV + ALLP++D +NH TH ++ + + L G ++SYGP+ ND LL FYGF++ +NPSD + ++D+ +WL
Sbjct: 55 PSSRLCKPSRLFLVCSSGRLDLFYHWLTRENVYMPKIKLDQNKDGLRGVVAVEGIECDESFLKVPRDLSLQVTEHEECTMS----------EFVDPELWSQENWYVKLSLKLLKEKYLGKLSLWKPYIDILPHALNTGL-VYWSSSELAQLQYRPLIEEVKINQYYREALYTRVFESLSSPVRVWLQNEKENV----------FFWALDMVQSRAFGIP-------------DVGNKT------------YALLPMMDMLNHRVNSQTHFLYDSIANQYEMKTYSKLSPGTDIYISYGPLDNDHLLHFYGFLQTNNPSDYFQVKDIFQWL 338
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A7S3EP57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP57_9RHOD) HSP 1 Score: 112 bits (281), Expect = 1.010e-22 Identity = 93/318 (29.25%), Postives = 141/318 (44.34%), Query Frame = 1
Query: 445 HADFEGLRGLMAKKAVAAWKPVATVPSSILLQECSMATGASIPTSPPEPLSVDA--WERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQLPPSTAAAPVFEED-------GDVPIRAPALEPSAPEDV-------------------------------RMALLPLIDSMNHYSRIPTHMYWEDDGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVL 1278
H +RG++A++ A + VP ++L+ SIP + P P V + W+ WWVRL +RL+ +K + Y+ LPK + P HW++E+L+ Y + Q+ Q++ ++R R+L TE + E++ + F WALECV SRAF A A F E G + + A L + E V R L P+ID NH SR + + +E + + P + G+ F+SYG SND LLQ+YGFVE +NP D YV+
Sbjct: 50 HTFAGNVRGMIAEQDFDASSAIVKVPKEMVLES------NSIPETNPIPSFVTSSYWKSQRWWVRLALRLVYQKQTDKKPNLSGYVNALPKTFST--PFHWTAEELQETQYIPIQKQVVNQQQEWKRLHRLL--------TENLKDERS-------VEFDEFVWALECVRSRAFS---GEAEATPFGERLKTIAFAGALSVAALTLHLADSEQVLNGLSLAVIALLSYDLIYPRVQKAIGGEEWKRYILCPIIDFCNHSSRAESDISYEYFFSSFVLKTGPYKKGEQVFISYGDRSNDQLLQYYGFVEENNPHDVYVV 341
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Match: A0A6H5LFY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFY0_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.690e-21 Identity = 140/541 (25.88%), Postives = 212/541 (39.19%), Query Frame = 1
Query: 265 PVRSLRRLHFVSSKSLTGDDLEDPTQEYVRPQGCVLAPHDPNIQAFEEWTIQQ-GSRGDLAHADF-EGLRGLMAKKAVAAWKPVATVPSSILLQECSMATGASIPTSPPEPLSVDAWERCPWWVRLGVRLLKEKSAGEGSKFREYIEILPKEGGSGAPLHWSSEQLKRLHYPRLLSQIALQRRLFQRFQRMLLADVNFATTERSEREKNSALVNALADPTAFSWALECVLSRAFQL---------------------------------PPSTAAAPVFEEDGDVPIRAPALEPSAPEDVRMALLPLIDSMNHYSRIPTHM-YWEDDGAVSLAVGAPLETGDHAFLSYGPVSNDDLLQFYGFVERDNPSDTYVL------------QDMGKWLREDGFLGANLSSKFLACAGAREAWRYLRQGVILRDAIHPSTLQAMRVICCEGTTDYTQSGKVESRLWDGTEADLERFGSPVSLASELASFELLMRYSAREADAWAESGVAAATVEDPTAPGLDTDLDGLG--LDADRQLMLSVFRKEK 1737
P R L SSKS P D ++ F W ++ G + F +GLRGL+A + +A + VPS E ++ T PE +S + W PW VRL + LL+EK G GS+ +I LP+ G P+ WS+ +L L YP L QR ++ + L+A E SWA+ SRAF+ P A F +P+R + + R AL P++D +NH S I + + Y G ++ G+ F+SYGP SND LLQ YGFVE+DNP+D Y + ++ + LRE G G ++ A G E+ R G++ + + + V+ D GK +R+ L+ F + +S A+E A+ + L + +E + G A+ ED + L LG L A +++ S FR EK
Sbjct: 56 PTRYCTELRMTSSKSKRSXXXXXXX---AGPTATATVSRDEDLAGFLRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPS-----ESALVTTTDQLCPFPEWVSKEFWASSPWQVRLALLLLREKQKGAGSELEPWISRLPE--SFGTPVSWSAAELLELQYPHLEVVAKEQREEWKGYYSSLMASSPGCGVAEEE----------------LSWAIGVAYSRAFRRYSGPYEGRGPKERLAEVAFVSALAGGSLALGLGTPDQVANGAFAVLLSIPLRDFFMTKLV-QLKRYALTPVVDLINHQSGIDSDVSYNYFYGYFAVTTQRGWTAGEQVFISYGPRSNDHLLQRYGFVEQDNPNDVYRITGLIDKLSDVLGKESVRVLRESG--GKLGTTGDNAEGGPVESVTVGRSGLLGEEEARVMPVLRLAVV----NDDQLPEGKA-ARI------SLKDFSNEISPANEAAARDALRKLCIKERE-----GFASTLAED------EAYLSSLGNSLGAQKRVAFS-FRMEK 544 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6108.13655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6108.13655.1 >prot_H-elongata_contig6108.13655.1 ID=prot_H-elongata_contig6108.13655.1|Name=mRNA_H-elongata_contig6108.13655.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=619bp MYHPTALLWLIISSTFIRSLNSFEPPCSPTCSKFNEEICKGLTNKRRCFLback to top mRNA from alignment at H-elongata_contig6108:1105..4489+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6108.13655.1 ID=mRNA_H-elongata_contig6108.13655.1|Name=mRNA_H-elongata_contig6108.13655.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3385bp|location=Sequence derived from alignment at H-elongata_contig6108:1105..4489+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6108:1105..4489+ >mRNA_H-elongata_contig6108.13655.1 ID=mRNA_H-elongata_contig6108.13655.1|Name=mRNA_H-elongata_contig6108.13655.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3714bp|location=Sequence derived from alignment at H-elongata_contig6108:1105..4489+ (Himanthalia elongata Himel1 dioecious)back to top |