mRNA_H-elongata_contig60751.13613.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig60751.13613.1
Unique NamemRNA_H-elongata_contig60751.13613.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.300e-81
Identity = 120/202 (59.41%), Postives = 150/202 (74.26%), Query Frame = 1
Query:    1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
            R GIKE++++PHVF  RPEFLMI+GVY+ TY  AN + TTCE  +VD  WP+ + TSAVN+ SC+AKD  FTRMF +  P  +P STY LFT RD  TV ASFN+P P S++LQ + GMSK  AD TAQ+ACPAA+Q  STPL+L+G+D+YNNP S+   R  F+ S+YTSS+  R+ R GPAFGIGGVGNTAFRK   + F
Sbjct:   77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG)

HSP 1 Score: 208 bits (529), Expect = 1.280e-64
Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
Query:    1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
            ++G + + LKPH F +  +FL I+GVY  TYVAAN I TTCE +++D T PK  GT+A N+A C+ KD  FTRMF TV     P  +Y LF ARD +TVAASFN P   S YLQ+    +K TAD+ AQL CPA +Q  STPL+LLG+D+YN  N  +  R   I  EY  S + R++R GPAFGIGGVGNT  R
Sbjct:   25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLR 219          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.010e-57
Identity = 96/204 (47.06%), Postives = 128/204 (62.75%), Query Frame = 1
Query:    7 GIKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
            G+K++    +  P  F  + EFL+I+G+Y+ TYV+AN I T CE ++ D+  PK IGT+AVN++ C+AKD  F RMF  + P   P ++  LF  RD +TVAASFN P   +K L++   M    A   AQL CPAA+Q  STPL+LLG+D+YNN   S   R  F+  EY  S+  R+ R GPAFGIGGVGNT FR    + F
Sbjct:   58 GLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG)

HSP 1 Score: 192 bits (487), Expect = 3.360e-57
Identity = 95/197 (48.22%), Postives = 131/197 (66.50%), Query Frame = 1
Query:    1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGM--SKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
            R+G++ ++++PH F   P+F +I G+Y  TY+ AN + TTCE  + + + PK + T+ VN++ C+ KD  FTRMF     RP+P +TY LF +RD +TVAASFN P+  S  L  R G    K++ADV AQLACPAA+Q  STP++LLG+D+YN P  S   R   +  EY  S I R++R GPAFGIGG+GN  FR
Sbjct:   85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG)

HSP 1 Score: 188 bits (478), Expect = 2.440e-56
Identity = 97/199 (48.74%), Postives = 130/199 (65.33%), Query Frame = 1
Query:    4 EGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVD---DTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
            +G + +  +PH F    ++ +I+G+Y  TY+ ANM+ TTCE+  VD    +W K + T+AVN++ C+ KD  FTRMF     +P+P  +YL F  RD MTVAASF  P   SK LQE+   S+  A V AQL+CPAA+Q FSTPL+LLG+D+YN P ++V  R   I S Y  + + R +R GPAFGIGGVGNT FR Y
Sbjct:   70 QGFQTLFTQPHKFVGSIQYRLIFGLYFGTYMTANMVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEK-EWSEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD)

HSP 1 Score: 188 bits (477), Expect = 2.500e-56
Identity = 94/204 (46.08%), Postives = 126/204 (61.76%), Query Frame = 1
Query:    7 GIKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMF 606
            GIKE+    +  P  F  + EF++++G+Y  TY +AN I T CE ++ D+  PK +GT+AVN+  C+AKD  F +MF  V P   P     LF  RD +TV ASFN P   +K L+   G+    A   AQL CPAA+Q  STPL+LLG+D+YNN  +SV AR +F+  EY  S + R+ R GPAFGIGGVGNT  R+   + F
Sbjct:   59 GIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS)

HSP 1 Score: 187 bits (476), Expect = 5.640e-56
Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = 1
Query:    1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCE---RSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
            ++G    +  PH F +  +F +++ +Y  TY+ AN+I TT E   R   +    K +GT+AVN+ +C+ KD  FTRMF TV  +P+P  +YLLF +RD +T+ +SFN P   SKY+Q E +  S K +D  AQLACPA MQ  STPL+LLG+D+YNN NSS   R   I  EY  S++ RV+R  PAFGIGGVGN   R Y
Sbjct:   71 KQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM)

HSP 1 Score: 186 bits (473), Expect = 9.730e-56
Identity = 92/195 (47.18%), Postives = 125/195 (64.10%), Query Frame = 1
Query:    1 REGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
            RE   + +  P  F  + EF +I+G+Y  TY+AAN+  T CE +++D+  PK I T+AVN++ C+AKD  F RMF  + P   P ++  LF  RD MT  ASFN P   +K ++++  M K  A   AQL CPAA+QL STPL+LLG+D+YNN   +V  R  F+  EY  S++ R+ R GPAFGIGGVGNT FR
Sbjct:   60 RELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFR 254          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG)

HSP 1 Score: 186 bits (471), Expect = 1.730e-55
Identity = 94/199 (47.24%), Postives = 125/199 (62.81%), Query Frame = 1
Query:    4 EGIKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDT---WPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 591
            +G K +I +P  F    +F +++G+Y  TY+ AN++ T  E+  +  T   W K I TS +N+  C+ KD  FTRMF     R +P  TYL F ARD MTVAASFN P   + +LQE   M ++ + VTAQLACPA +Q  STP++LLG+D+YN PN++   R   I  EY  S + RV R GPAFGIGGVGNT FR +
Sbjct:   56 QGFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254          
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP)

HSP 1 Score: 184 bits (468), Expect = 5.860e-55
Identity = 91/197 (46.19%), Postives = 125/197 (63.45%), Query Frame = 1
Query:    7 GIKEMILK----PHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFR 585
            G+KE+ ++    P  F  + EF +I+G+Y  TYV AN++ + CE ++ D+  PK IGT+AVN++ C+AKD  F RMF  + P   P ++  LF  RD MT  ASFN P   +K +++   M K  A   AQL CPAA+Q  STPL+L+G+D+YNN   ++  R  F+  EY  S+  RV R GPAFGIGGVGNT FR
Sbjct:   60 GLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFR 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60751.13613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G8_9STRA3.300e-8159.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A261XX22_9FUNG1.280e-6452.82Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A662XCZ4_9STRA3.010e-5747.06Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A433PI02_9FUNG3.360e-5748.22Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
A0A8H7BJY4_9FUNG2.440e-5648.74Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
K3WSU5_GLOUD2.500e-5646.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8H7U8D9_MORIS5.640e-5647.26Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
H3GH37_PHYRM9.730e-5647.18Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8H7S7R9_9FUNG1.730e-5547.24Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
G4ZUB7_PHYSP5.860e-5546.19Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60751contigH-elongata_contig60751:1481..2789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue3e-46
Seed eggNOG ortholog42099.EPrPV00000018360
EggNOG free text desc.Pc13g06010 protein. Source PGD
EggNOG OGs1MEHD@121069,28PN9@1,2QWAD@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size615
Cds size597
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60751.13613.1prot_H-elongata_contig60751.13613.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig60751 1481..2771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930981.8452132-CDS-H-elongata_contig60751:1480..17081622930981.8452132-CDS-H-elongata_contig60751:1480..1708Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 1481..1708 -
1691679649.7882612-CDS-H-elongata_contig60751:1480..17081691679649.7882612-CDS-H-elongata_contig60751:1480..1708Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 1481..1708 -
1622930981.8638246-CDS-H-elongata_contig60751:2096..22821622930981.8638246-CDS-H-elongata_contig60751:2096..2282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 2097..2282 -
1691679649.8018308-CDS-H-elongata_contig60751:2096..22821691679649.8018308-CDS-H-elongata_contig60751:2096..2282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 2097..2282 -
1622930981.8794513-CDS-H-elongata_contig60751:2588..27711622930981.8794513-CDS-H-elongata_contig60751:2588..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 2589..2771 -
1691679649.810803-CDS-H-elongata_contig60751:2588..27711691679649.810803-CDS-H-elongata_contig60751:2588..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60751 2589..2771 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930981.9032443-UTR-H-elongata_contig60751:2771..27891622930981.9032443-UTR-H-elongata_contig60751:2771..2789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig60751 2772..2789 -
1691679649.820416-UTR-H-elongata_contig60751:2771..27891691679649.820416-UTR-H-elongata_contig60751:2771..2789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig60751 2772..2789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig60751.13613.1

>prot_H-elongata_contig60751.13613.1 ID=prot_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDTWPKLIGT
SAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMP
DPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNS
SVIARGKFIMSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSMFTS*
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mRNA from alignment at H-elongata_contig60751:1481..2789-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig60751.13613.1 ID=mRNA_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1309bp|location=Sequence derived from alignment at H-elongata_contig60751:1481..2789- (Himanthalia elongata Himel1 dioecious)
AGGGAAGGGATCAAGGAAATGATTCTCAAGCCTCACGTTTTCCACAGCCG GCCGGAGTTCTTGATGATCTGGGGTGTCTACGCGGTAACGTACGTTGCCG CAAACATGATCATCACGACTTGTGAGCGAAGTCAGGTAGACGACACGTGG CCGAAGCTCATCGGCACCAGCGCCGTCAACATTGCCAGTTGTGTCGCAAA GGTAACCGCTCGTTCTTGCTTTTAGGATACGAACACATAGATCACGATAG CTTGGATCTCCTGTGAACATTATTCCCTCGTCTTGATGGGTAATCTAAGG TGCTGTACATATGTTTTTTTATCGTGCTTAATGAATACCGCAATTGGCAA TATAAAACATATGACATGTTGTGTGCGTAATGCTCTTTGTACTGATGTGC TTGATCACAAGCGTTTTCTCCGGAGAAACATATCAAGAGCTAACTTGTCT TGTGGCAAATACCGTGTGTGTTTTGTTCGTGAATAATGATTTTCCTCGCC CGACCAGGATCTACAATTTACGCGTATGTTCGCAACGGTGAAGCCGAGAC CAATTCCAGCCTCGACGTACCTTCTATTCACGGCCCGTGACGGCATGACC GTCGCAGCATCGTTCAACATGCCTGATCCGGCATCGAAGTACCTCCAAGA GCGGCTCGGAATGTCAAAGAAGACCGCTGACGTCACTGCGCAGGTATGCA TGACGACGGGATCCAGAATCGTTCATTTTATTTACGGAGTTGGTGGTTGG GTTATTTTAGTGTAAATAACCAGGCGATAGCGGCGCATTAGGTACGTAAG TCAGGGCAGATTGCTCTGTCCAGGGCAAATGTGATGAGCGCGTGGATGAT GTCACCCTCTCACGAGTCAAGTACATCCCAAATGTGTGCCCGCCGTTTAA TTTAGTTTCAGTCCATCGAAAATAAATTGGCTTCATCTCCACCTTTTTCT CGAGGGTGGTCCTTACGACGTATATCTGGTAGCGCAATGTCCCTCCTTAT ACCCACCCCACCCTCCTTGCACCACTTGCCGTATGCTGTCGGATACCCTC CCTCCATTCCCCGACATATTATGGCTTGCAGCTTGCGTGTCCAGCCGCCA TGCAACTTTTCTCGACGCCGTTGAATCTTCTCGGGATGGACGTTTACAAC AACCCGAACAGCAGCGTAATCGCCCGCGGGAAGTTCATTATGTCGGAGTA CACTTCGTCCATGATTTTGCGAGTCAGCCGCACCGGCCCCGCTTTCGGTA TCGGGGGCGTGGGTAACACGGCGTTCCGAAAATACTTTACGTCCATGTTC ACCTCTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig60751:1481..2789-

>mRNA_H-elongata_contig60751.13613.1 ID=mRNA_H-elongata_contig60751.13613.1|Name=mRNA_H-elongata_contig60751.13613.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig60751:1481..2789- (Himanthalia elongata Himel1 dioecious)
ATGATTCTCAAGCCTCACGTTTTCCACAGCCGGCCGGAGTTCTTGATGAT
CTGGGGTGTCTACGCGGTAACGTACGTTGCCGCAAACATGATCATCACGA
CTTGTGAGCGAAGTCAGGTAGACGACACGTGGCCGAAGCTCATCGGCACC
AGCGCCGTCAACATTGCCAGTTGTGTCGCAAAGATGATTCTCAAGCCTCA
CGTTTTCCACAGCCGGCCGGAGTTCTTGATGATCTGGGGTGTCTACGCGG
TAACGTACGTTGCCGCAAACATGATCATCACGACTTGTGAGCGAAGTCAG
GTAGACGACACGTGGCCGAAGCTCATCGGCACCAGCGCCGTCAACATTGC
CAGTTGTGTCGCAAAGGATCTACAATTTACGCGTATGTTCGCAACGGTGA
AGCCGAGACCAATTCCAGCCTCGACGTACCTTCTATTCACGGCCCGTGAC
GGCATGACCGTCGCAGCATCGTTCAACATGCCTGATCCGGCATCGAAGTA
CCTCCAAGAGCGGCTCGGAATGTCAAAGAAGACCGCTGACGTCACTGCGC
AGGATCTACAATTTACGCGTATGTTCGCAACGGTGAAGCCGAGACCAATT
CCAGCCTCGACGTACCTTCTATTCACGGCCCGTGACGGCATGACCGTCGC
AGCATCGTTCAACATGCCTGATCCGGCATCGAAGTACCTCCAAGAGCGGC
TCGGAATGTCAAAGAAGACCGCTGACGTCACTGCGCAGCTTGCGTGTCCA
GCCGCCATGCAACTTTTCTCGACGCCGTTGAATCTTCTCGGGATGGACGT
TTACAACAACCCGAACAGCAGCGTAATCGCCCGCGGGAAGTTCATTATGT
CGGAGTACACTTCGTCCATGATTTTGCGAGTCAGCCGCACCGGCCCCGCT
TTCGGTATCGGGGGCGTGGGTAACACGGCGTTCCGAAAATACTTTACGTC
CATGTTCACCTCTTAGCTTGCGTGTCCAGCCGCCATGCAACTTTTCTCGA
CGCCGTTGAATCTTCTCGGGATGGACGTTTACAACAACCCGAACAGCAGC
GTAATCGCCCGCGGGAAGTTCATTATGTCGGAGTACACTTCGTCCATGAT
TTTGCGAGTCAGCCGCACCGGCCCCGCTTTCGGTATCGGGGGCGTGGGTA
ACACGGCGTTCCGAAAATACTTTACGTCCATGTTCACCTCTTAG
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