mRNA_H-elongata_contig60696.13609.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A6H5KSL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL2_9PHAE) HSP 1 Score: 329 bits (844), Expect = 3.070e-106 Identity = 143/175 (81.71%), Postives = 162/175 (92.57%), Query Frame = 1
Query: 4 VHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDSL 528
VHFIGE+SGAEGFGSG+SCRFRVEGG HWTCLAGL+EGQTHV H D GD F PWNHP+DLHYTTKSIQGWPR+M+QVWQLDT+GRNVLRGYGFRHLPS PGFSEVS+PCWRP+G+ QEETAAFFLGVTPRLT +DAVFNRAWDQRCRL+TLP+GT W++++ LFRNL DQ VD++
Sbjct: 584 VHFIGEISGAEGFGSGISCRFRVEGGRHWTCLAGLEEGQTHVIHMDYGDTFAPWNHPVDLHYTTKSIQGWPRVMLQVWQLDTHGRNVLRGYGFRHLPSTPGFSEVSIPCWRPSGSMQEETAAFFLGVTPRLTAEDAVFNRAWDQRCRLITLPAGTVWLQMHGLFRNLEDQGVDNI 758
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: D8LL98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL98_ECTSI) HSP 1 Score: 330 bits (845), Expect = 4.230e-106 Identity = 143/176 (81.25%), Postives = 163/176 (92.61%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDSL 528
+VHFIGE+SGAEGFGSG+SCRFRVEGG HWTCLAGL+EGQTHV H D GD F PWNHP+DLHYTTKSIQGWPR+M+QVWQLDT+GRNVLRGYGFRHLPS PGFSEVS+PCWRP+G+ QEETAAFFLGVTPRLT +DAVFNRAWDQRCRL+TLP+GT W++++ LFRNL DQ VD++
Sbjct: 612 EVHFIGEISGAEGFGSGISCRFRVEGGRHWTCLAGLEEGQTHVMHMDYGDTFAPWNHPVDLHYTTKSIQGWPRMMLQVWQLDTHGRNVLRGYGFRHLPSTPGFSEVSVPCWRPSGSMQEETAAFFLGVTPRLTAEDAVFNRAWDQRCRLITLPAGTVWLQMHGLFRNLEDQGVDNI 787
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A836CKT8_9STRA (B9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKT8_9STRA) HSP 1 Score: 228 bits (582), Expect = 7.560e-74 Identity = 99/175 (56.57%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDS 525
++H IGE+ G GFG+GVSC +RVE G +WT L G G T VA+AD + PWNHP+D+HYTTKS+QGWPRL++QVW+LD GR ++GYGF HLP G +EV++PCWRP G+ QEE A+FFLG P+L +D+ +FN AWDQRC+L T PSGT +++N+L R++ DQ+VD+
Sbjct: 8 EMHVIGEILGGVGFGTGVSCMYRVEAGKNWTLLCGHDAGHTQVAYADP-EELAPWNHPLDVHYTTKSMQGWPRLVMQVWRLDEFGRMAVQGYGFAHLPCAAGAAEVAVPCWRPVGSVQEEIASFFLGTAPQLRSDEVLFNMAWDQRCQLTTAPSGTIILQLNILLRDMRDQNVDT 181
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A7S1XQQ9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQQ9_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.520e-59 Identity = 98/184 (53.26%), Postives = 124/184 (67.39%), Query Frame = 1
Query: 1 KVHFIGELSGA--EGFGS-------GVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDS 525
+VHF+GE+ GA E F + G+ C+F VE G +W+ LAG Q GQT VA+++ P NHPIDLH+TTKS+QGWPR + QVW LD GR + GYGF HLP PG V +PCWRPTGT +EET AFFLG T +LTTDD VF AWD R RLVT +G+ ++V VL R+ ++ VD+
Sbjct: 235 EVHFMGEIRGAVGESFSTMIGFDAEGIFCKFMVEAGKYWSHLAGDQIGQTQVAYSEDETGLRPMNHPIDLHFTTKSLQGWPRFIAQVWALDVFGRANVVGYGFAHLPVMPGMHTVEVPCWRPTGTLKEETEAFFLGTTTQLTTDDVVFGTAWDNRWRLVTASAGSLVLDVAVLTRHFNEHSVDA 418
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A2R5G8Y1_9STRA (B9 domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Y1_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.170e-56 Identity = 89/175 (50.86%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDS 525
+VH IGE+ G FGSGV CR++++ G W L+G EGQTHV + GD W+HP+D+H+ K IQGWPRL+VQVWQ+D GR LRGYGF HLP G E+ + WRP GT +EE AA FLGVTP+L D +F +AW RCRL T +G + V++L RN H +V++
Sbjct: 98 EVHVIGEIDGGINFGSGVCCRWQLDFGSAWEPLSGNVEGQTHVDYPSDGDS-AVWSHPLDVHFLAKGIQGWPRLLVQVWQMDEFGRVHLRGYGFTHLPCASGSYELDVATWRPMGTLKEEIAANFLGVTPQLRDMDLLFKKAWSDRCRLSTTSAGIVRVNVDILLRNFHLYNVNA 271
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: B5YLQ9_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLQ9_THAPS) HSP 1 Score: 169 bits (429), Expect = 1.030e-50 Identity = 80/174 (45.98%), Postives = 116/174 (66.67%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFG-SGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDV 519
+VHFIGE+ GF S VSC++ +E G W+ LAG QT A +D G W+HPID+H+ + S+QGWPR++VQVW+LD GR+ L GYGF HLP+N G+ + + CWRP+G+ +EE +FFLG + L +D +F +AW+ R +LVT+ SG + + VL R ++Q+V
Sbjct: 1 EVHFIGEICEGIGFNDSFVSCKWYLEWGKSWSFLAGDDSSQTQYACSDDGVQV--WSHPIDVHFASASMQGWPRIIVQVWELDEFGRSSLSGYGFVHLPTNAGYHSLEIRCWRPSGSVREELQSFFLGTSSCLLDEDTIFGKAWENRSQLVTVSSGIVKLNLTVLLRFFNEQNV 172
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: K3X035_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X035_GLOUD) HSP 1 Score: 171 bits (433), Expect = 2.800e-49 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFG-SGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRN 501
+VH +GE++ EGFG G +C++ +E G W +AG Q GQT + + W+HPIDLH+ S QGWP+L+ QVWQ+DT+ ++ + GYGF HLP +PG +S+ WRP G+A+EE A FLG TP L TD+ +F+ AW +RCRL T+ +G ++V +L RN
Sbjct: 163 EVHIVGEITSGEGFGHGGFACKWGIEYGSMWHHIAGDQLGQTQIDYPSSSTHPIIWSHPIDLHFAAASFQGWPKLLFQVWQIDTHMKSSVAGYGFIHLPFSPGEYHLSVALWRPIGSAKEEMEARFLGHTPELVTDEVIFSSAWAERCRLQTIATGKVHLQVGILLRN 330
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A7S3YY39_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YY39_9EUKA) HSP 1 Score: 166 bits (420), Expect = 2.950e-49 Identity = 78/167 (46.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFG-SGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFR 498
+VH IGE+ G EGFG S C FRVE G +W C G + GQ+ V +A G WNHP+DLH+ TKS +GWP L +V LD+ G L GYG ++PS+PG ++ P WRPTGT +EE FFLG P+L DA+F++A +QR RL T +G ++++V+ R
Sbjct: 7 EVHVIGEICGGEGFGHSNAFCSFRVEKGEYWECCEGKETGQSQVDYAQPGSAGFTWNHPLDLHFFTKSAKGWPALSFEVGALDSTGARTLCGYGSCYIPSSPGSHDIKCPIWRPTGTPKEEITGFFLGARPQLVDKDAIFSKASEQRYRLFTETAGYVKLKLDVIVR 173
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: A0A6U0YPS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0YPS4_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.330e-48 Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRNLHDQDVDS 525
+VH IGEL G E FG+GV+CR+R+E G W L G +G T A+ G WNHPID+HY S+QGWP+++V V +LD GR GYGF LP+ PG +V++ CWRPTGT +E AFFLG P L DD ++++A R RLVT+P+G +E+N++ R+ VD+
Sbjct: 253 EVHVIGELLGGEAFGTGVACRWRLEHGKFWGVLEGSTQGHTQTAYCPDG-ALAVWNHPIDVHYHATSVQGWPKIIVHVTKLDEYGRLGTVGYGFASLPTVPGCHDVTVNCWRPTGTKGDELRAFFLGDYPHLLDDDVIYHKATAFRNRLVTIPAGRVHLEINLMTRHFAAYGVDA 426
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Match: T0QYV4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QYV4_SAPDV) HSP 1 Score: 169 bits (428), Expect = 4.500e-48 Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 1 KVHFIGELSGAEGFGSGVS--CRFRVEGGHHWTCLAGLQEGQTHVAHADIGDPFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTNGRNVLRGYGFRHLPSNPGFSEVSLPCWRPTGTAQEETAAFFLGVTPRLTTDDAVFNRAWDQRCRLVTLPSGTAWIEVNVLFRN 501
+VH +G+L G GF +G S C++RV+ G W + G + GQTHV +GD W HPID+ +TT S+QGWPRL+VQVW +D +G + GYGF H+PS+PG V++ WRP G+ +E AA FLG T L DD VFN AW RCRL T+ SG EV+V+ R+
Sbjct: 207 EVHLLGDLVGGSGFDTGASYVCKWRVDYGEAWQHVCGKEVGQTHVDTPSVGDEVI-WAHPIDVLWTTYSMQGWPRLLVQVWTVDEHGSAHVCGYGFAHVPSSPGHHLVTIGLWRPLGSEHQELAALFLGQTTELLGDDVVFNSAWADRCRLRTIASGQVHFEVHVILRH 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60696.13609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60696.13609.1 >prot_H-elongata_contig60696.13609.1 ID=prot_H-elongata_contig60696.13609.1|Name=mRNA_H-elongata_contig60696.13609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp KVHFIGELSGAEGFGSGVSCRFRVEGGHHWTCLAGLQEGQTHVAHADIGDback to top mRNA from alignment at H-elongata_contig60696:2026..3291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60696.13609.1 ID=mRNA_H-elongata_contig60696.13609.1|Name=mRNA_H-elongata_contig60696.13609.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1266bp|location=Sequence derived from alignment at H-elongata_contig60696:2026..3291- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60696:2026..3291- >mRNA_H-elongata_contig60696.13609.1 ID=mRNA_H-elongata_contig60696.13609.1|Name=mRNA_H-elongata_contig60696.13609.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at H-elongata_contig60696:2026..3291- (Himanthalia elongata Himel1 dioecious)back to top |