mRNA_H-elongata_contig60424.13585.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 293 bits (749), Expect = 3.870e-88 Identity = 162/249 (65.06%), Postives = 186/249 (74.70%), Query Frame = 1
Query: 13 PSGAAPLAPGSVSQVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREGAFH--DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREIDDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTIS---IADRELSRHHSTVEC------VCTR---QSGDGSG-ASAGEDIPVAGAVGAKAL---VGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
P+GAAP APGS+S+V+LKFTTVADGNE SF+V REGATVGRG CNDI IP D CMGES+HASIVWREGAFH DRG PYGAS+RIGTGRG RDWPL +G++FSAGN+VFH EID+ +GMLLEIVAGPLKG+ RRVQ GA +GRATE+TI IADRELSR+HST+EC +C+ SGDG A G+D A A L + G G G+ G GR EFYLCDVGSTNGTYVQ+
Sbjct: 313 PAGAAPSAPGSLSEVILKFTTVADGNEASSFTVKREGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIRHIIIADRELSRNHSTIECDDNARSLCSSGWASSGDGGADAGGGDDRRSAEAKKDGMLDLSTAESVDGKSGQGEAGGGRTEFYLCDVGSTNGTYVQL 561
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S1UBQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ7_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.400e-40 Identity = 91/222 (40.99%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 52 QVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREG--AFH--DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREIDDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
++VLKFTT+++GNE P+F VG GA++GR P N++S+PTD + HA I +R AF+ D GH +GA+IRI G G R W L E +VFSAGN+ F D +LLE+ +GPLKGE RRV GAT+GR N SI D+ELSR H +E S FY+CDVGSTNGTY+ +
Sbjct: 170 EIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCD-ASSVLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEPKDDS-------------------------------------------FYICDVGSTNGTYMHL 347
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.750e-39 Identity = 91/222 (40.99%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 52 QVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREG--AFH--DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREIDDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
++VLKFTT+++GNE P+F VG GA++GR P N++S+PTD + HA I +R AF+ D GH +GA+IRI G G R W L E +VFSAGN+ F D +LLE+ +GPLKGE RRV GAT+GR N SI D+ELSR H +E S FY+CDVGSTNGTY+ +
Sbjct: 170 EIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCD-ASSVLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEPKDDS-------------------------------------------FYICDVGSTNGTYMHL 347
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S2GBR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GBR9_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.460e-37 Identity = 86/226 (38.05%), Postives = 123/226 (54.42%), Query Frame = 1
Query: 43 SVSQVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREGAFH---DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREID--DRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
SV+++VLKFTT++DG+E SF V + G T+GR P N+IS+P+DM + + HASI +GAF + Y A++R+G GR W L + + FSAGN++F ++ D + + ++ GP K ET V GAT+GRAT NT+ I+DRELSR HS V + + DG+ FY+ D+GSTNGTYVQ+
Sbjct: 11 SVTKLVLKFTTLSDGSEKASFCVDQRGGTIGRSPDNNISVPSDMTLAKVRHASIEHSDGAFELVDANTNEYHAAVRVGVGRSASAWLLAKDAAFSAGNSIFQVMDVQQGDNPRLTVTVLTGPRKNETLCVTRQGATLGRATVNTVCISDRELSRRHSKV----SYDAVDGN---------------------------------------FYVSDLGSTNGTYVQL 193
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.330e-35 Identity = 83/224 (37.05%), Postives = 118/224 (52.68%), Query Frame = 1
Query: 46 VSQVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREGAFH--DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREID--DRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
V ++VLKFTT++DGNE SF + G T+GRG N + +P+D + + HA + + G F D Y A++R+G GR + WPL + + FS+GN++F +++ + L + GP KGET V GAT+GRAT+NT+ I DRELSR HS V S +G D+P FY+ D+GSTNGTYVQ+
Sbjct: 1 VDRLVLKFTTLSDGNEKASFCLDARGGTIGRGLENHVCVPSDTTLAKLRHACVEYSNGEFQLVDTSSDYHAAVRVGVGRAAQAWPLTKTAAFSSGNSIFEVVDVELHPTPAVSLAVRTGPRKGETLVVGKDGATLGRATDNTVCIPDRELSRRHSRVSF-----SKEG-------DVP-----------------------------SFYISDLGSTNGTYVQL 183
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7R9U1S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1S5_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.000e-35 Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 121 GATVGRGPCNDISIPTDMCMGESDHASIVWREG--AFH--DRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREIDDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVE 507
GA++GRGP N++++PTD + HA IV++ AF+ D G +GA++RI G G R W L E ++FSAGN+ F E DD G+L+E+ AGPLKGE RRV GA++GRAT+N +SI DRELSR HS +E
Sbjct: 2 GASIGRGPANEVAVPTDTTLEADKHAMIVYKHDRKAFYLKDMGLEHGAAVRIEAGTGLRQWRLSENALFSAGNSSFKVVESDDT-GVLIEVGAGPLKGERRRVTQKGASLGRATDNVLSIGDRELSRRHSRIE 133
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: W7U755_9STRA (Protein phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.690e-34 Identity = 83/222 (37.39%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 46 VSQVVLKFTTVADGNEVPSFSVGREGATVGRGPCNDISIPTDMCMGESDHASIVWREGAFHDR--GHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREIDDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
V +++LKFTT + E +F +G+ G ++GR N +S+P+D + E HA I ++ G+F+ + G + A+IR+G RDWPLV G+ FSAGN++F EI M+ E++ GPLKGE V GAT+GR+ +NT+SIAD ELSR HS +E + DG ++YL DVGSTNGTY+Q+
Sbjct: 491 VDKLILKFTTYSQDKEHSAFVIGKGGGSIGRDVKNTVSVPSDSTLQEDSHAFIGFKAGSFYIKNLGVTHCAAIRVGAEPVVRDWPLVRGATFSAGNSIFLVVEITPTE-MVAEVIDGPLKGERLEVSQKGATLGRSPDNTLSIADPELSRRHSRIEY----EEKDG---------------------------------------KYYLSDVGSTNGTYMQL 668
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S3YCX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCX7_HETAK) HSP 1 Score: 110 bits (275), Expect = 1.580e-26 Identity = 67/164 (40.85%), Postives = 82/164 (50.00%), Query Frame = 1
Query: 223 FHDRGHPYGASIRIGTGRGRRDWPLVEGSVFSAGNTVFHAREID---DRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
HD G P GA+++IG G R+WPL+ S FSAGN+V D D + L I GPLKGE R++ GA +GRATEN +SI DRELSR HS + V D R R +FYLCDVGSTNGTY+Q+
Sbjct: 8 LHDLGQPLGAAVQIGKGIEDREWPLIVNSAFSAGNSVLVVESADLNGDEPMIWLRIEEGPLKGERRKITKEGAALGRATENALSIPDRELSRRHSLI-------------------------------VHDPR------------RRQFYLCDVGSTNGTYMQL 128
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 5.730e-12 Identity = 44/118 (37.29%), Postives = 56/118 (47.46%), Query Frame = 1
Query: 352 DDRRGMLLEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
D + LE+ +GPL+GE RRV GA +GRAT+N IS+AD+ELSR HS VE GR ++LCDVGSTNGTY+Q+
Sbjct: 4 DAEPALFLEVTSGPLRGERRRVGREGAALGRATDNAISVADKELSRRHSLVEYD-------------------------------------------RGRGAYFLCDVGSTNGTYMQL 78
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Match: A0A6H5LAB3_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB3_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 3.170e-8 Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 1
Query: 373 LEIVAGPLKGETRRVQTGGATVGRATENTISIADRELSRHHSTVECVCTRQSGDGSGASAGEDIPVAGAVGAKALVGDGRKGARGGGKGGDGRLEFYLCDVGSTNGTYVQV 705
LE VAG LKG + V+ GAT+GRA++NT+S+AD+E+SR HS +E +AL EF+LCD+GS NGTY+Q+
Sbjct: 504 LEAVAGCLKGRSWMVEAAGATLGRASDNTLSLADKEMSRRHSKIEYD-------------------------EALG------------------EFFLCDLGSLNGTYMQM 571 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60424.13585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60424.13585.1 >prot_H-elongata_contig60424.13585.1 ID=prot_H-elongata_contig60424.13585.1|Name=mRNA_H-elongata_contig60424.13585.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp SAGPPSGAAPLAPGSVSQVVLKFTTVADGNEVPSFSVGREGATVGRGPCNback to top mRNA from alignment at H-elongata_contig60424:332..2664- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60424.13585.1 ID=mRNA_H-elongata_contig60424.13585.1|Name=mRNA_H-elongata_contig60424.13585.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2333bp|location=Sequence derived from alignment at H-elongata_contig60424:332..2664- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60424:332..2664- >mRNA_H-elongata_contig60424.13585.1 ID=mRNA_H-elongata_contig60424.13585.1|Name=mRNA_H-elongata_contig60424.13585.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig60424:332..2664- (Himanthalia elongata Himel1 dioecious)back to top |