mRNA_H-elongata_contig60417.13583.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A6H5KHQ5_9PHAE (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ5_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.660e-46 Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
VS LMEWAG EGVCLIPFGGGT+VTRALE+P LDVEPRP+ M VL VD+ NGTAH++AG VGR L+ ELA RGVT+GHEPDS+EFSTLGGWVATRASGMKRGR
Sbjct: 1662 VSRLMEWAGAEGVCLIPFGGGTNVTRALEVPPLDVEPRPV-------MDRVLDVDVANGTAHIQAGVVGRKLAAELAERGVTMGHEPDSLEFSTLGGWVATRASGMKRGR 1764
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: D7FUE9_ECTSI (Alkylglycerone-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.070e-45 Identity = 84/110 (76.36%), Postives = 90/110 (81.82%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
VS LMEWAG EGVCLIPFGGGTSVTRALE+P LDVEPRP+ M VL VD NGTAH++AG VGR L+ ELA RGVT GHEPDS+EFSTLGGWVATRASGMKRGR
Sbjct: 2042 VSRLMEWAGAEGVCLIPFGGGTSVTRALEVPPLDVEPRPV-------MDRVLDVDDANGTAHIQAGVVGRKLAAELAERGVTTGHEPDSLEFSTLGGWVATRASGMKRGR 2144
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A7S2PPS2_9STRA (Alkylglycerone-phosphate synthase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPS2_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.180e-36 Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
VS L+ A E CLIPFGGGT+V+ A P + EPRPI+SVDM+++C VL V+ +G AHVEAG G L+ +L + GVT+GHEPDS+EFSTLGGW+AT+ASGMKR R
Sbjct: 190 VSQLVALAAAENWCLIPFGGGTNVSHATWCPPKEKEPRPIISVDMKRLCRVLWVNKEDGLAHVEAGITGGELASQLEKFGVTMGHEPDSIEFSTLGGWIATKASGMKRSR 299
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: B5Y5M7_PHATC (Alkylglycerone-phosphate synthase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5M7_PHATC) HSP 1 Score: 134 bits (337), Expect = 1.100e-34 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 40 CLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
C+IPFGGGT+V++A P + VEPRPI+SVDM +M +L V NG AHVEAG GR L EE+ RRG T+GHEPDS EFSTLGGW+AT+ASGMKR +
Sbjct: 117 CVIPFGGGTNVSQATRCPPIQVEPRPIISVDMTQMNRILWVSEENGLAHVEAGITGRALVEEMNRRGFTIGHEPDSYEFSTLGGWIATKASGMKRNK 213
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A1Z5JHW7_FISSO (Alkylglycerone-phosphate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHW7_FISSO) HSP 1 Score: 134 bits (338), Expect = 2.260e-34 Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 10 LMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKR 324
L+ A + CLIPFGGGT+V++A + P++DV+PRPI+SVDM +M ++L+VD N AHVE G GR L +E+ R G T+GH+PDS EFSTLGGW+AT+ASGMKR
Sbjct: 1770 LIRMAQSQNWCLIPFGGGTNVSQATKCPSIDVDPRPIISVDMTEMRKILAVDEENEVAHVECGITGRELVQEMKRFGYTIGHQPDSYEFSTLGGWIATKASGMKR 1874
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A4Q3JUW0_9DELT (Alkylglycerone-phosphate synthase (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q3JUW0_9DELT) HSP 1 Score: 133 bits (334), Expect = 5.860e-34 Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 10 LMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
L+E A GVCL+PFGGGT+VT AL LP LD E R +++ D+R+M ++L VD N TA +EAGA GRH++ ELAR G+T+GHEPDS EFSTLGGWVAT ASGMK+ R
Sbjct: 179 LVETARERGVCLVPFGGGTNVTDALRLP-LD-EQRLVIAADVRRMNKILWVDPVNRTACIEAGATGRHIATELARHGMTMGHEPDSAEFSTLGGWVATNASGMKKNR 283
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A1Z5JB54_FISSO (Alkylglycerone-phosphate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JB54_FISSO) HSP 1 Score: 133 bits (334), Expect = 7.830e-34 Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 10 LMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
L+ A CLIPFGGGTSV++A + P+++V+PRPI+SVDM +M VL+VD N AHVE G G+ L +E+ R G T+GH+PDS EFSTLGGW+AT+ASGMKR +
Sbjct: 1769 LIRMARSRNWCLIPFGGGTSVSQATKCPSIEVDPRPIISVDMTEMRRVLAVDEENEVAHVECGITGKELVQEMKRLGYTIGHQPDSYEFSTLGGWIATKASGMKRNK 1875
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A2N1L5H9_TRIHA (Alkylglycerone-phosphate synthase n=2 Tax=Trichoderma harzianum TaxID=5544 RepID=A0A2N1L5H9_TRIHA) HSP 1 Score: 129 bits (323), Expect = 1.080e-33 Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPT-LDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
V G++E A ++GVCLIP+GGGT+V+ AL P+ D E R IVSVD R+M ++L +D N A +EAGAVG ++ E LA RG T+GHEPDS EFSTLGGW+AT ASGMK+ R
Sbjct: 201 VIGIVEAARQKGVCLIPYGGGTNVSAALRCPSNQDGENRMIVSVDTRRMDKILWIDPVNRLAQIEAGAVGSNIMEALAERGFTMGHEPDSCEFSTLGGWIATNASGMKKNR 311
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A448ZP76_9STRA (Alkylglycerone-phosphate synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP76_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.720e-33 Identity = 64/110 (58.18%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
V +++ A R+G CLIP+GGGT+V A P D EPRPIV+V +++ VL ++ +G AHVEAG GR L E LARRG T+GHEPDS+EFSTLGGW+AT+ASGMKR +
Sbjct: 2112 VLAIVDAARRKGWCLIPYGGGTNVIEATRCPPRDTEPRPIVTVSTKRLNRVLWLNEEDGLAHVEAGITGRDLVEILARRGYTMGHEPDSIEFSTLGGWIATKASGMKRSK 2221
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Match: A0A150PM43_SORCE (Alkylglycerone-phosphate synthase (Fragment) n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150PM43_SORCE) HSP 1 Score: 130 bits (327), Expect = 3.720e-33 Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 1 VSGLMEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVDIGNGTAHVEAGAVGRHLSEELARRGVTLGHEPDSMEFSTLGGWVATRASGMKRGR 330
V L+E A G CL+PFGGGT+VT AL LP E R +V++DMR+M ++ VD N TA +EAGA GRH++ ELAR G+TLGHEPDS EFSTLGGW+AT ASGMK+ R
Sbjct: 138 VERLVEVAHARGACLVPFGGGTNVTDALRLPV--DEARVVVALDMRRMNKLRWVDPVNRTACIEAGATGRHIAAELARHGLTLGHEPDSAEFSTLGGWIATNASGMKKNR 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60417.13583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60417.13583.1 >prot_H-elongata_contig60417.13583.1 ID=prot_H-elongata_contig60417.13583.1|Name=mRNA_H-elongata_contig60417.13583.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp MEWAGREGVCLIPFGGGTSVTRALELPTLDVEPRPIVSVDMRKMCEVLSVback to top mRNA from alignment at H-elongata_contig60417:310..982- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60417.13583.1 ID=mRNA_H-elongata_contig60417.13583.1|Name=mRNA_H-elongata_contig60417.13583.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=673bp|location=Sequence derived from alignment at H-elongata_contig60417:310..982- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60417:310..982- >mRNA_H-elongata_contig60417.13583.1 ID=mRNA_H-elongata_contig60417.13583.1|Name=mRNA_H-elongata_contig60417.13583.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig60417:310..982- (Himanthalia elongata Himel1 dioecious)back to top |