mRNA_H-elongata_contig60325.13573.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 3.520e-56 Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 1
Query: 169 LLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKE 537
L W +RWVR + G AHKFH FDFLHLDEKWFYICK GQRY+ YEGE L +RKVQHKSH++KV+FL AVARPR+DS+R+R FDGKI IYPF V+RA +RN R+ AGTMVTHSVEVNR YK+
Sbjct: 34 LSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKK 156
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A6A4ZGT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGT3_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.580e-39 Identity = 70/182 (38.46%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 7 LQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLG-LRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLIN 549
++ VP R T+R +AA D P +T+ H+K L++ S +++P LTD K AR+ + ++R T GG F ++ D++H+DEKWFY+ K +RY++Y+ E+++ R +HKSHI K++FL AVARPR+D FDGKI ++PF+ + +R++++R GT++ VN Y + ++N
Sbjct: 12 IKAVPHHLRQTMRSLAAQADIPKTTILRHMKATSRLKARSSYIRPMLTDANKRARIKFAASFLRPTSGGT-TFVNMHDYVHVDEKWFYLTKVKRRYYVYDDEEVAARACKHKSHITKIMFLAAVARPRYDPHTRSFFDGKIGVWPFVQESVAKRSSKNRPRGTVIIEPQSVNGDVYCDKMLN 192
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A6A4Z4U1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4U1_9STRA) HSP 1 Score: 144 bits (363), Expect = 8.800e-38 Identity = 67/185 (36.22%), Postives = 121/185 (65.41%), Query Frame = 1
Query: 1 EILQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLG-LRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLINR 552
+ ++ VP R TLR +A + P ST+ H++ L++ S ++KP LT++ RL + + +VR + G H F S+ ++H+DEKWFY+ K +++++Y+ ED+++R V+ K I KV+FL AVARPR+DS++ + FDGK+ ++PF+ +R +++R GT VT + VN Y+++++++
Sbjct: 109 QAIKTVPHFARQTLRSVAHQSNIPKSTIIRHIRETKRLKARSSYVKPLLTEDNLKTRLKFAMNFVRPSASGTHIFASMHQYVHVDEKWFYLTKVKRKFYVYDDEDIALRSVKSKQFITKVMFLAAVARPRYDSSKKKFFDGKVGVWPFVEVAPAKRTSKNRPKGTAVTVPISVNGDVYRDSIVDK 293
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384) HSP 1 Score: 143 bits (360), Expect = 1.170e-37 Identity = 74/167 (44.31%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 16 VPLQTRTTLRLIAAALDTPLSTLFDHLKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWV-RDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVE 513
+PL RTT+R +A AL+ ++L +K L+S S +KP LT+E + RL + I + ++P F ++D +H+DEKWF++ K Q+Y++ GED R + K I KV+FL AVARPRFDS RN +FDGKI I+PFI K A +R +++R AGT+VT +E
Sbjct: 70 IPLNRRTTIRSMATALNMSKTSLHRRVKEGSLKSHSNAIKPLLTEENRKVRLQFCISMIDSNSPPHNPSFIDMYDRVHIDEKWFFLSKSSQKYYLLPGEDEPYRTCKSKKFIAKVMFLCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIE 236
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.260e-37 Identity = 74/183 (40.44%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 7 LQGVPLQTRTTLRLIAAALDTPLSTLFDH-LKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLINR 552
++ VP R TLR +AA++ PL+TL H + + S +LKP LTD RL + + ++R PG F + D +H+DEKWFY+ K+ Y+IY+ E L++R VQ KSHI KV+FL AVARPR+D R +FDGK+ ++PF+V +R++++R GT+ T V V Y+ + ++
Sbjct: 112 IRAVPHARRRTLRSVAASVVIPLTTLHRHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVWPFVVDEPAKRSSKNRPKGTIETKPVSVTADVYQAMMFDK 294
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A485K7A8_9STRA (Aste57867_2337 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7A8_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.780e-36 Identity = 73/182 (40.11%), Postives = 114/182 (62.64%), Query Frame = 1
Query: 1 EILQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLI 546
+ ++ VP R+T R +AAA PL+TL+ LK L+ + LKP LT + A R + + + T G++K+H + D +H+DEKWFYI K ++Y+++ EDL K Q K HI+KV+FLVAVARPR D R++++DGKI +PF+ + +R +++R GT VT + V + Y+ L+
Sbjct: 90 KAIKDVPPFARSTFRSLAAATGVPLATLWALLKKKKLQRRTSRLKPLLTPDHMARRFEFARSFTQRTVDGSYKWHDMMDRVHIDEKWFYITKVNRKYYLWHDEDLPQWKCQSKRHILKVMFLVAVARPRHDFQRHKMWDGKIGCWPFVETQLAKRRSKNRDRGTPVTVPITVTKNVYRRYLV 271
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR) HSP 1 Score: 139 bits (350), Expect = 2.360e-36 Identity = 71/181 (39.23%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 7 LQGVPLQTRTTLRLIAAALDTPLSTLFD-HLKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLI 546
++ +PL R TLR ++ A+D P STLFD + ++ S +KP LTD+ K RL + + V G F L+D++H+DEKWFY+ K + Y++ E+ R + K IMK++F+ AVARPR+D+ R FDGKI I+PF+ + +RN+++R GTM+T +VE + +N+I
Sbjct: 84 IRNIPLNRRGTLRSLSLAIDIPKSTLFDIFISGKYMKRISSTVKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEEPERNYKSKRFIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMI 264
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: W2YNB0_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YNB0_PHYPR) HSP 1 Score: 137 bits (344), Expect = 4.200e-36 Identity = 73/181 (40.33%), Postives = 117/181 (64.64%), Query Frame = 1
Query: 1 EILQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENL 543
E ++ +PL+ R +R +A++L STL D+ + RS S +KP LTD+ +AAR+ + +V G F+S+ DF+HLDEKWF++ K QR+++ E E++ V++K++I+KV+FL AV RPR+D+TR R++DGKI ++PF V ER +++R AGT+ + V R Y + L
Sbjct: 98 EAIELIPLEDRADIRTLASSLGIAKSTLHDYYQAGAFRSHSAHVKPLLTDKQRAARVEFAAGFVHRGFGERLTFNSMMDFVHLDEKWFFLKKDKQRFYLGENEEVPHITVKNKNYIIKVMFLCAVTRPRWDATRLRIWDGKIGLWPFAVYEPAERASKNRPAGTLEIKTYSVGREIYHQAL 278
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: W4FF05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF05_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.030e-35 Identity = 68/174 (39.08%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 31 RTTLRLIAAALDTPLSTLFDHLKNLGLRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLINR 552
R+T R +AA +TL+ +K+ ++ C+ LKP LT + K RL++ ++R P G +H + D++H DEKWFY+ K ++Y+++ ED+ RK Q K+HI+KV+FL AVARPR+DST+ +DGKI + F R RN+R+ G V V+R Y++ L+N+
Sbjct: 76 RSTFRALAAVTGVSKTTLWRLVKSKAMKRCTSRLKPMLTQKHKHVRLVYSKTFLRRHPNGTLYWHDMLDYVHKDEKWFYMTKVNRQYYLWSDEDVPARKCQSKNHIIKVMFLTAVARPRYDSTKRTHWDGKIGTWAFTSTRQALRNSRNCKRGDDVVEPTTVSREVYRDYLVNK 249
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Match: A0A6A4Z4V5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4V5_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.160e-35 Identity = 68/183 (37.16%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 7 LQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLG-LRSCSRFLKPPLTDEGKAARLLWVIRWVRDTPGGAHKFHSLFDFLHLDEKWFYICKHGQRYHIYEGEDLSVRKVQHKSHIMKVIFLVAVARPRFDSTRNRLFDGKISIYPFIVKRAVERNNRDRVAGTMVTHSVEVNRLTYKENLINR 552
++ VP +R TLR ++AA P++T+F H K +S S ++KP LT ARL + + +VR P G H F + +++H+DEKWFY+ K +RY++Y+ E+++ R V+ K I KV+FL AVARPR+D +++DGK+ ++P + R++++R GT++T VN Y + ++N+
Sbjct: 109 IRAVPHMSRQTLRSLSAASGIPMTTIFQHKKATPRFKSKSSYVKPFLTQGNIEARLRYALSFVRPLPNGRHCFSDMHEYVHIDEKWFYLTKVKRRYYVYDDEEVAARSVKSKHFITKVMFLAAVARPRYDHHAKKIWDGKVGVWPLVQVSPAARSSKNRPRGTLITVPQIVNFDVYFDAVVNK 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60325.13573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60325.13573.1 >prot_H-elongata_contig60325.13573.1 ID=prot_H-elongata_contig60325.13573.1|Name=mRNA_H-elongata_contig60325.13573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp EILQGVPLQTRTTLRLIAAALDTPLSTLFDHLKNLGLRSCSRFLKPPLTDback to top mRNA from alignment at H-elongata_contig60325:1137..1688+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60325.13573.1 ID=mRNA_H-elongata_contig60325.13573.1|Name=mRNA_H-elongata_contig60325.13573.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=552bp|location=Sequence derived from alignment at H-elongata_contig60325:1137..1688+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60325:1137..1688+ >mRNA_H-elongata_contig60325.13573.1 ID=mRNA_H-elongata_contig60325.13573.1|Name=mRNA_H-elongata_contig60325.13573.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig60325:1137..1688+ (Himanthalia elongata Himel1 dioecious)back to top |