mRNA_H-elongata_contig60144.13549.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 6.940e-130 Identity = 182/228 (79.82%), Postives = 206/228 (90.35%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKS 684
+M+F+ RK MHMLFL++LV LCFHS FRYV IL++WY++D YFITKQT+LVSHPT+EAIGRGTMVGIDLPEGY +KAGSYIYVNCPAIDR EWHPFSLIPVPG+ SRAAFYAEAVGDWT +LFRLGL NPS PLWITAAQPS +ETTL+YDNVLLICTGAG+TPA+AVA+RF+ KKNIHLMWIARDHGMMALFEKQLR+V STVHLTG P EE+K AMS+L S+S
Sbjct: 275 KMTFQFRKRMHMLFLVMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVTSRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNVLLICTGAGITPAVAVADRFAAKKNIHLMWIARDHGMMALFEKQLRMVTSTVHLTGNPDEEIKDAMSKLLSRS 502
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.690e-94 Identity = 136/228 (59.65%), Postives = 174/228 (76.32%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKS 684
Q++FE RK +H+LF+ ++ +CFH + +G IL+ WY+LD+LYF TK T+L+S P ++ +GRGT+V +LP GY YK G+Y+ VNCPAI EWHPFSL PVPG RA F+ EAVGDWT E+FR L NP PLWITAAQPS +E T+Y++NVLL+CTGAG+TPA++VAERF KKKNIHL+W RD GM+A+FEKQLR V STV LTGKPT + K+ M L + S
Sbjct: 404 QLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGPRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFENVLLVCTGAGITPAVSVAERFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVFLTGKPTNKTKKRMVDLLAPS 631
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI) HSP 1 Score: 271 bits (693), Expect = 7.820e-82 Identity = 124/228 (54.39%), Postives = 162/228 (71.05%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKS 684
+++FEARK +H+LF+ ++ +CFH + +G IL+ WY+LD+LYF TK T+L+S P ++ +GRGT+V +LP GY YK G+Y+ VNCPAI EWHPFSL PVPG RA F+ EAVGDWT E+FR L NP PLWITAAQPS VE T+Y+DN ++ A+ + F KKKNIHL+W RD GM+A+FEKQLR V STV+LTGKPT + K+ M L + S
Sbjct: 392 KLTFEARKYLHLLFIPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGSRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVVEKTMYFDNE------PSISEAIELEPVFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVYLTGKPTNKTKKRMVDLLAPS 613
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.620e-79 Identity = 120/227 (52.86%), Postives = 156/227 (68.72%), Query Frame = 1
Query: 4 MSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKS 684
M+FE RK +HMLF+ +V +CFH + GIL+ WY++D+ YF T+ GY +K GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT ELFRL L +P PLWITAAQPS +E ++Y++NV+++CTGAG+TPA+ +A+ SKKKN+HLMW++R+ GM+A FEKQLR VNSTVHLTGKPTE+ K+ ++ L + S
Sbjct: 172 MTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRI------------------------GYQFKVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFENVIMVCTGAGITPAICLADMLSKKKNVHLMWLSREAGMVATFEKQLRRVNSTVHLTGKPTEKTKQRLTDLLAHS 374
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE) HSP 1 Score: 192 bits (489), Expect = 9.450e-55 Identity = 82/154 (53.25%), Postives = 105/154 (68.18%), Query Frame = 1
Query: 4 MSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDN 465
M+FE RK +HMLF+ +V +CFH + GIL+ WY++D+ YF T+ + + F +GR T+V DLP GY + GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT ELFRL L +P PLWITAAQPS +E ++Y++N
Sbjct: 381 MTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRMHFCIERAVFRPVGRATLVRFDLPPGYQFNVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLEDPCMPLWITAAQPSVLEKSVYFEN 534
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: A0A7S2A4J8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4J8_TRICV) HSP 1 Score: 139 bits (350), Expect = 2.440e-34 Identity = 70/219 (31.96%), Postives = 110/219 (50.23%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGS--YIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVN---STVHLTGKPT 642
++ +E RKG+H LF + +C+CFH G YV G I Y LD +Y T + TF+ + G ++ +++ + + + G + YV P +DR +WH FSL P S+ + GDWT + RN P+W+ SP YDN +L+ +G G+TPAL+V + +L+W RD M+ F + L L + + + TGK T
Sbjct: 181 KIRYEIRKGLHYLFYVFAICMCFHGGYIGYVLGFCISLYSLDMMYITLFMTEKIETTTFQVLSSGVLMSMNVSKSFQKRGGQGGFAYVCLPWVDRNQWHAFSLFEHPSNPSKRQVFMLKTGDWTRAVHEALQRNTVRPVWVQGPFVSPYSQAEAYDNQILVASGIGITPALSVIRAHRDSRRSNLIWAVRDPSMLQFFLEHLYLDHDGWNLIFYTGKET 399
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: B8CG47_THAPS (FAD-binding FR-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG47_THAPS) HSP 1 Score: 127 bits (320), Expect = 2.720e-30 Identity = 72/215 (33.49%), Postives = 106/215 (49.30%), Query Frame = 1
Query: 4 MSFEARKGMHMLFLLLLVCLCFHSGTFRY--------VGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYH--YKAGSYIYVNCPAIDRGEWHPFSLIPVP-GINSRAAFYAEAVG-DWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVN 612
MS+E RKG+H LF L + +CFH+ T + V G IV+Y LD LY + T ++ F + G + + + + + Y G Y YV P + + +WH FSL P N R F + G DWT + RN P+WI+ SP L +DN + + +G G+TPAL+V + + I+L+W RD M+ F L L N
Sbjct: 214 MSYEVRKGLHYLFYLFAIGMCFHNKTSAFPNGGFNQVVLGFCIVYYTLDSLYVMIFMTEMIETTVFNVLPSGVQMTMAVSDHFQKTYAQGGYGYVCLPWVSKYQWHAFSLFEHPTDPNLRQVFMMKVQGGDWTNSVHEQLQRNTVRPVWISGPFVSPYNNALDFDNTICVASGIGITPALSVIRAHRESRRINLIWTCRDVAMLEFFSDHLYLNN 428
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL) HSP 1 Score: 127 bits (318), Expect = 6.380e-30 Identity = 69/219 (31.51%), Postives = 116/219 (52.97%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHS---GTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPS-HPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVNST---VHLTGK 636
++S+E RKG+H L + + L FH+ F + +L+V Y LD LY + + Y++ F + G + PEG+ + G Y+ + P ++R +WH FSL P +++ + VGDWT L P+ P W+ SP T L +DN++L+ +G G+TPA+ V +K + ++L+W RD G++ + +QL NS ++ TGK
Sbjct: 211 RLSWEVRKGLHHLHWVFGIALAFHAPAVNIFWIMFAVLLV-YGLDALYGLLLKAYIIETAEFTCLKNGVQLRFVNPEGF--RGGGYVLLCVPWLNRHQWHAFSLFSHPTEPNQSCVHISNVGDWTDLLHGSLTERPTCRPCWVQGPFASPYHTALEFDNIILVASGIGITPAIEVINHHAKTRKVNLVWSCRDPGLVQFYLEQLAFTNSAWNLIYYTGK 426
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU) HSP 1 Score: 123 bits (308), Expect = 1.230e-28 Identity = 66/226 (29.20%), Postives = 115/226 (50.88%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFHSGTF--RYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKAGSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRLVN---STVHLTGKPTEEVKRAM 663
+M++E RKG+H L ++ + +CFH+ ++ G+ + Y+ D L +TY V F + G + + P G+H++ Y+ V P I + +WH FSL + A AVGDWT L P WI+ SP T YDN++L+ +G G+TPAL++ + +K+ ++L+W RD ++ + + + + ++ TGK E+ RA+
Sbjct: 187 RMAWEWRKGLHYLSIVWGITICFHAPLMDIAWLMGVPVGMYLADMLIGSVWRTYRVDTSIFYRLENGVELTFEHPPGFHFQGAGYVLVCLPWISQYQWHAFSLFAHSTKPNHACVCMSAVGDWTKSLHAHVQEPTRRPAWISGPFASPYSTAGEYDNLILVASGIGITPALSLITTYKEKRRVNLIWSCRDASLVEFYLDKCQFSTDGWTLIYYTGKRQLELPRAL 412
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Match: A0A7S4NI13_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI13_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.410e-28 Identity = 68/212 (32.08%), Postives = 100/212 (47.17%), Query Frame = 1
Query: 1 QMSFEARKGMHMLFLLLLVCLCFH--------SGTFRYVGGILIVWYILDKLYFITKQTYLVSHPTFEAIGRGTMVGIDLPEGYHYKA--GSYIYVNCPAIDRGEWHPFSLIPVPGINSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFSKKKNIHLMWIARDHGMMALFEKQLRL 606
++S+E RKG+H LF+L V LCFH G G I Y D Y T + TF + G + + + E + + G + +V P +D+ +WH FSL P S+ + GDWTT + + R+ P+WI SP YDN +L+ TG G+TPAL+V + I+L+W RD M+ F + L L
Sbjct: 103 KISYEMRKGLHYLFILFAVGLCFHVPMSAIPNGGFIAPAMGFCIFLYAADASYVYLFMTEKIETTTFHVLSSGVRITMPVSETFQKSSEKGGFAFVCLPWVDKLQWHAFSLFEDPSDPSKRQMFMLKTGDWTTAVHKALQRDTVRPVWIQGPFLSPYNYAEMYDNQVLVATGIGITPALSVIRAHKSSRRINLVWAVRDPSMLEFFLEHLYL 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60144.13549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60144.13549.1 >prot_H-elongata_contig60144.13549.1 ID=prot_H-elongata_contig60144.13549.1|Name=mRNA_H-elongata_contig60144.13549.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp MSFEARKGMHMLFLLLLVCLCFHSGTFRYVGGILIVWYILDKLYFITKQTback to top mRNA from alignment at H-elongata_contig60144:63..2495+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60144.13549.1 ID=mRNA_H-elongata_contig60144.13549.1|Name=mRNA_H-elongata_contig60144.13549.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2433bp|location=Sequence derived from alignment at H-elongata_contig60144:63..2495+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60144:63..2495+ >mRNA_H-elongata_contig60144.13549.1 ID=mRNA_H-elongata_contig60144.13549.1|Name=mRNA_H-elongata_contig60144.13549.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig60144:63..2495+ (Himanthalia elongata Himel1 dioecious)back to top |