mRNA_H-elongata_contig60078.13544.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI) HSP 1 Score: 248 bits (634), Expect = 5.200e-81 Identity = 115/127 (90.55%), Postives = 121/127 (95.28%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
VMALTGKP+EHLELPQVGRYYT+QKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDV SGGCT+FP+LG++VQPRKGMAVVFFPATL G LD LLHAAEPAIDTKWVSQIWIRQG YHGTPT
Sbjct: 162 VMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPT 288
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.410e-59 Identity = 93/127 (73.23%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
V LTGKP +HLELPQVGRY TQ YA H DAFDL T+DG RFAQNGGQRV TVL+YLNDV GG TSFPRLGL V PR+GMAVVFFP+TL G D + LH AEPA+D K+VSQIWIRQG Y G PT
Sbjct: 85 VCMLTGKPADHLELPQVGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLYTGEPT 211
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.910e-58 Identity = 89/127 (70.08%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
+MALTGKPLEH ELPQ+GRY +QKY H+DAFDL E GRRFA NGGQR TVL+YLNDV +GG T+FP L L V+PR+GMA+VFFPAT+ G LD M LHAA PAIDTK+VSQ+WIRQG Y G P+
Sbjct: 130 IMALTGKPLEHCELPQIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVSQVWIRQGNYEGQPS 256
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.500e-58 Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
V LTGKP+EH ELPQVGRY+ +Q+Y H+DAFDL+ EDGRRFA NGGQR TVLVYLNDV GG TSFP L L VQPR+GMA+VFFPAT+ G LD M LHAA PA+DTK+VSQ+WIRQG Y G P+
Sbjct: 255 VSLLTGKPIEHCELPQVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEYKGQPS 381
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.460e-57 Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
V LTGKP +H ELPQVGRY TQ+Y H+DAFDL++EDGRRFA NGGQR T+LVYLNDVS+GG T FPRL ++VQPR+GMA+VFFPAT+ GTLD M LHAA PA+D K+VSQ+WIRQ Y G P+
Sbjct: 179 VTLLTGKPFQHCELPQVGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVSQVWIRQTNYDGVPS 305
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A8J9TA93_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TA93_PHATR) HSP 1 Score: 183 bits (465), Expect = 8.540e-57 Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTY 366
V +LTGKP+EH ELPQVGRY+ +Q+Y H+DAFDL TEDG RFA NGGQR TVL+YLNDV+ GG T FP L L VQPR+GMA+VFFPAT+ G LD M LHAA PA+DTK+VSQ+WIRQG Y
Sbjct: 67 VSSLTGKPIEHCELPQVGRYFPSQQYLQHYDAFDLGTEDGLRFAANGGQRTITVLLYLNDVARGGATRFPALNLDVQPRQGMALVFFPATIDGMLDRMALHAAMPAVDTKYVSQVWIRQGHY 188
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO) HSP 1 Score: 186 bits (471), Expect = 8.670e-57 Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
V LTGKP EH ELPQVGRY+ +KY H+DAFDL+TEDGRRFA NGGQR TVL+YLNDV GG T FP L L +QPR+GMA+VFFPAT+ G LD M LHAA PAIDTK+VSQ+WIRQ Y+G P+
Sbjct: 84 VSLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPS 210
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A7S2YBM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBM7_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.530e-56 Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHGTPT 381
V LTGKP++H ELPQVGRY+ +Q+Y H+DAFDL TEDG RFA NGGQR TVL+YLND GG T FP L L VQPR+GMA+VFFPAT+ G LD M LHAA PAIDTK+VSQ WIRQ TY G P+
Sbjct: 97 VSLLTGKPMDHCELPQVGRYFASQQYLQHFDAFDLGTEDGLRFAANGGQRTVTVLIYLNDCERGGGTRFPALNLEVQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKYVSQCWIRQSTYSGQPS 223
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.080e-56 Identity = 88/124 (70.97%), Postives = 101/124 (81.45%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQGTYHG 372
V ALTG P+EHLELPQVGRY + Y H+DAFD ++ DGRRFAQNGGQRV TVLVYLNDV+ GGCTSF +LGL +QP+KG A+VFFPA+L G LD LHAAEPA+D KWVSQIWIRQ Y+G
Sbjct: 109 VCALTGCPVEHLELPQVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAYNG 232
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Match: F0Y4P1_AURAN (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P1_AURAN) HSP 1 Score: 180 bits (457), Expect = 1.160e-55 Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 1 VMALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVSSGGCTSFPRLGLRVQPRKGMAVVFFPATLGGTLDPMLLHAAEPAIDTKWVSQIWIRQ 357
V ALTGKPLEHLELPQVGRY + Y H+DAFD ++ DGRRFAQNGGQRV TVLVYLNDV GG TSF +LG+R++PRKG A++FFPATL G LD LHAAEPA+D KWVSQIWIRQ
Sbjct: 62 VCALTGKPLEHLELPQVGRYRGGEFYKPHYDAFDTSSADGRRFAQNGGQRVATVLVYLNDVERGGETSFSKLGVRIKPRKGNALIFFPATLDGVLDQNYLHAAEPAVDPKWVSQIWIRQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60078.13544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60078.13544.1 >prot_H-elongata_contig60078.13544.1 ID=prot_H-elongata_contig60078.13544.1|Name=mRNA_H-elongata_contig60078.13544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp MALTGKPLEHLELPQVGRYYTTQKYANHWDAFDLNTEDGRRFAQNGGQRVback to top mRNA from alignment at H-elongata_contig60078:1..1881- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60078.13544.1 ID=mRNA_H-elongata_contig60078.13544.1|Name=mRNA_H-elongata_contig60078.13544.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1881bp|location=Sequence derived from alignment at H-elongata_contig60078:1..1881- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60078:1..1881- >mRNA_H-elongata_contig60078.13544.1 ID=mRNA_H-elongata_contig60078.13544.1|Name=mRNA_H-elongata_contig60078.13544.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig60078:1..1881- (Himanthalia elongata Himel1 dioecious)back to top |