mRNA_H-elongata_contig5998.13529.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: D7FLW6_ECTSI (RNA methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW6_ECTSI) HSP 1 Score: 310 bits (793), Expect = 3.780e-95 Identity = 192/429 (44.76%), Postives = 239/429 (55.71%), Query Frame = 3
Query: 3 GYYNTRYGCEPASAT---------DNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADRE---------DFDSGGYNNALNNGVAFATGHPD-----LLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKV------RRGE----SNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLD--------------DAEEDT---FLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
GYYNTRYG + + A+ AG RDPR+ +++RSWFEGKKCLDVGCNEGHLTLA+VR FRPRRMVG+DID YLV+ AR+ L+ EIN+A K R + D G A + PD S P + + G A + E +VP + R+G S V + R G S++ G E + +D + KP S+S +G DA T + + DA D L+GC V FR EDFV EAH GYD VCLFSVVKWMH+NGGD+A++GVFRKT+ LLRPGGRLILEPQPWK+YRKSARQHG+ +A I++RP DF A+LTGEVGFRSWEE+G+P EGVG FAKRS+HVF+K
Sbjct: 38 GYYNTRYGIDGSGASAXXXXXXXXXXXXXAGARDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRTFRPRRMVGLDIDSYLVRRARKELSMEINAAAHAGKSTEFRPLMPRSLRGGEDDVGDEEQATPATASIPVARPDEEAHGADSSTPKLKANAGGEGDASGVSGGARSTEPEVHVPGRKNECRDSRKGSVGAASESVALPESRGGGTTGGAAAGSTSVGTEIDPVRKDRDTR---KPVATVGGSLSDTHEGGNDATADDTTSGSTVAEAATVVAVAAAGVVADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGLPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 463
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A2D4C8W2_PYTIN (RNA methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8W2_PYTIN) HSP 1 Score: 145 bits (366), Expect = 2.240e-35 Identity = 114/346 (32.95%), Postives = 148/346 (42.77%), Query Frame = 3
Query: 75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAR---------EALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPL--VPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
DPRL +L + WF GK+ LDVGCN G LT+AI ++F P ++G+D+D L+ AR E L G + + +A R D D A ++ A H + S + VP S + T + K SA V KV A G+E R+ V F+ ED V +AH G YD + FSV KW+HL GD ++GVF+ H+LL PGGRLILEPQPWKSY K R+ A AN DKI++RP DF AFL VGF+S E L
Sbjct: 35 DPRLAVLSKDWFAGKRGLDVGCNSGDLTVAIAKKFEPAYLLGIDVDPQLIARARGQLKDIMQREHLQGALEAVATSATRSDDATDA-------ATDSSAEAAPSHDESKTSAMVTDVPLSFKLWKTPAHS------KTSAPKVLGKV---------------------------ALGSEFPRN-------------------------------------------------------VVFKREDIVKDAHAGKDYDFITCFSVTKWIHLFHGDDGIKGVFQHLHDLLAPGGRLILEPQPWKSYHK--RKFTSAVTAANYDKIQLRPKDFPAFLVETVGFKSCEFL 283
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A3B3RW34_9TELE (RNA methyltransferase n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RW34_9TELE) HSP 1 Score: 144 bits (364), Expect = 1.690e-32 Identity = 128/392 (32.65%), Postives = 174/392 (44.39%), Query Frame = 3
Query: 3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDF-----DSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVS-------VVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADAR-ANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
G YN YG ++ DPR+ +L+ WF+GK LD+GCN GHLTLAI + +RP R+VG+DID LV AR+ + ++ RRA RED DS G +AL + + RP +S + L + A P V RG++ V C + E V T +E +P +N+ V +S G A T D +F+ G V D +L A YD + SV KW+HLN GD VQ +F + LRPGG ILEPQPW SY K + + DA N IR +P F+ +LT EVGF S+E +G P F +R I++F K
Sbjct: 415 GNYNKYYGYRNPGWSE--------DPRMCVLQPEWFQGKAVLDLGCNTGHLTLAIAKNWRPARIVGLDIDSALVHAARQNIRHYLSEVQAQQARRAVREDAGGSHGDSTGRRDALPESPSGGAANNVQKMDRP--DKSDKKTEAGLDVMWVPDGSTKLAEPPVSVERGDTGAV-------------C-----SEDMEGVEGT------MEPEPPRNSPMDVDHPFPVSLKISRGPIAAPPLPDTPPAVPGDFPANISFVRGNYV--LDNDILLHAQKP-EYDVILCLSVTKWVHLNWGDSGVQRLFHRVFRHLRPGGLFILEPQPWGSYGKRKK---LTDAIFKNYHSIRFKPDQFSTYLTSEVGFSSYELIGTPKSSSRGF-QRPIYLFRK 765
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A329RWP6_9STRA (RNA methyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWP6_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.390e-31 Identity = 117/366 (31.97%), Postives = 157/366 (42.90%), Query Frame = 3
Query: 6 YYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
YY R G + ++ DPRL L RSWFEGK+ LD+GCN G LT+ I ++ P ++GVD+D L+ AR L K+ R+ E AF+ + + +S G A + + S EE E V+ GE + G +G+ A NK+ L K + + A + AVG F+ ED V +AH G GYD + FSV KW+HL GD+ ++ VF K +ELL PGGRLI+EPQPWKSY K R+ AN KI++RP DF L VGFRS E L
Sbjct: 39 YYTYRLGQKHQGELED-------DPRLAALDRSWFEGKRGLDIGCNSGELTITIAKRLEPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AFSE-----IPAVKAPAKSEEGAAASPADVSDEE--------KEAVKVGEDGIKKTG---DGDAFA---------------------NKMP----------------------LSFKLWKPSMHSQATVPRAIGKAAVGSKFPLNVVFKREDIVSDAHAGKGYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLIIEPQPWKSYHK--RKFTSEVTAANYPKIQLRPKDFPKHLVESVGFRSCEFL 314
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6A3JM65_9STRA (RNA methyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JM65_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.850e-31 Identity = 119/369 (32.25%), Postives = 158/369 (42.82%), Query Frame = 3
Query: 6 YYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDG---AKDADLHGKTFTTATLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
YY R G + ++ DPRL L RSWF+GK+ LD+GCN G LT+AI ++ P ++GVD+D L+ AR L K+ R+ E AF G A+ T S + K S+A H+ A + AE +K+D K S V DG A + L + + + A + AVG F+ ED V +AH G YD + FSV KW+HL GD+ ++ VF K +ELL PGGRLI+EPQPWKSY K R+ AN KI++RP DF L VGFRS E L
Sbjct: 51 YYTYRLGQKHQGELED-------DPRLAALDRSWFDGKRGLDIGCNSGDLTIAIAKRLAPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AF-------------------GEIPAVKTTSKSDKKGSSAG----------------------HVDAESPADVSGEAEQEVVEKKEDEK----------KSNVKVGDGDAFASEMPLSFRLWKPSMQTQASVPKAIGKAAVGSEFPLNVIFKREDIVADAHAGKEYDFITCFSVTKWIHLFHGDEGIKKVFEKIYELLTPGGRLIIEPQPWKSYHK--RKFTSDVTAANYPKIQLRPKDFPKHLVEAVGFRSCEFL 337
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: G3QBV8_GASAC (RNA methyltransferase n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3QBV8_GASAC) HSP 1 Score: 135 bits (340), Expect = 4.750e-31 Identity = 114/381 (29.92%), Postives = 169/381 (44.36%), Query Frame = 3
Query: 3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFT-TATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMAD-ARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
G YN YG A++ D R+ +L+ WFEGK LD+GCN GHLTL I + RP R++G+DID LV AR+ + ++ R A +E N +G H D S G A +GES E GK H + G + V++ + +++ P ++ + VS + T TAT E + ++ + E+ L YD + SV KW+HLN GD ++ +F++ + LRPGG ILEPQPW+SY R+ + D N IR++P FA++LT EVGF S+E LG P + F +R +++F K
Sbjct: 52 GNYNKYYGYRNPGASE--------DARVRVLRPEWFEGKDVLDLGCNSGHLTLYIAKMLRPARILGLDIDSGLVHAARKNIRHYLSELQTQEARHALQEKKG----NKQGESGTGTGERHSDAKSSE-------ENGKPA---------------------KGESGPAEAGKDNGSCHADEVGTQ-----RQVVKTGETEQEDLDSPPADHSASCSFPVSLRISRGPIAAPPLTETATTRPGEFPSNVSFVKANYVLENDNLLVTQRPEYDVIMCLSVTKWVHLNWGDCGLKRLFQRVYRHLRPGGVFILEPQPWESY---VRRKKLTDNIGRNFHSIRLKPDQFASYLTSEVGFTSYEYLGAPKCSIKGF-QRPMYLFHK 383
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A3R7GWV4_9STRA (RNA methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GWV4_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.730e-31 Identity = 114/369 (30.89%), Postives = 154/369 (41.73%), Query Frame = 3
Query: 75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTA------TLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
DPRL L ++WFEGK+ LD+GCN G T+ I R P ++G+D+D LV AR L K+ R+ E AF TA+ TA +E K S + + AD + +GA+ + + V + A +AD + T A + AVG F+ ED V +AH G YD + FSV KW+HL GD+ ++ VF K +ELL PGGRLILEPQPWKSY K R+ AN KI++RP DF L VGFRS E L + F +R ++V +K
Sbjct: 58 DPRLAALDKNWFEGKRGLDIGCNSGEFTITIARHLEPSYLLGIDVDPQLVSRARGHL--------KDIMRQEQIEK--------------AFEK-------------------ITAVKTAVNKEDKVSTTAIV------------------ADSPADVSGGDATSGADTIGDKQS-------------------VKEDAAEADAFANDMPLSFRLWKPTQPQAAVPRAIGKAAVGSKFPLNVIFKREDVVTDAHAGMDYDFITCFSVTKWIHLFHGDEGIKKVFVKIYELLAPGGRLILEPQPWKSYHK--RKFTSDITAANYPKIQLRPKDFPTHLVEMVGFRSCEFLEVCQTSAKGF-RRPVYVALK 345
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6P3W781_CLUHA (RNA methyltransferase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W781_CLUHA) HSP 1 Score: 139 bits (351), Expect = 6.990e-31 Identity = 118/391 (30.18%), Postives = 173/391 (44.25%), Query Frame = 3
Query: 3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGH------PDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGC-----GYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADA-RANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
G Y YG +D DPR+ +L+ WF+GK LD+GCN GHLT++I +Q+RP R+VG+DIDG L+ AR+ + ++ RR ED G + +GV T + + RP+ R L+ ++ + E+ R E N ++++G G G S R I A P + + + +F A V F ++VLEA YD + SV KW+HLN GD ++ +FR+ + LRPGG LILEPQPW SY R+ + D N I +RP F+ +LT EVGF S+E +G P E + +R I++F K
Sbjct: 416 GNYTKYYGYRNPGTSD--------DPRMEMLRPEWFQGKTVLDLGCNTGHLTMSIAKQWRPSRIVGLDIDGGLIHAARQNIRYYLSEIQAREARRHGEEDGQRGRVTDDRKDGVCEETTEHRNDPMEEDREDRPVTDRGLKSN----------RAEQGGNGLDERRRALERNEERTSEKKDG----GGGRGYPKGGGTFPVSLRISRGPIAAPPLPRSPSQ--------------------------QRGSFPAN--VSFVTGNYVLEADQLLLPEKEEYDVILCLSVTKWVHLNWGDAGLKRLFRRAYRHLRPGGLLILEPQPWSSY---GRKKRLTDTIYKNYFNIHLRPDQFSTYLTCEVGFSSYEFIGTP-EHLSRGFQRPIYLFRK 752
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6G1QV82_9TELE (RNA methyltransferase n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1QV82_9TELE) HSP 1 Score: 137 bits (345), Expect = 3.650e-30 Identity = 123/401 (30.67%), Postives = 181/401 (45.14%), Query Frame = 3
Query: 3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRS---------TRKKDNKIEAKPQKNNEA-----SVSV-------VSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMAD-ARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
G YN YG A++ DPR+ +L+ WFEGK LD+GCN GHLTL I + RP R++G+DID LV AR+ + ++ RR +E S R+ G + + EK + NR ENGK GE + AEAV T+++D+K E Q++ ++ SVS +S G A +TFTT + +F+ V ++ +L YD + SV KW+HLN GD ++ +F++ + LRPGG+ ILEPQPW+SY R+ + D N I ++P F+++LT EVGF S+E LG P V F +R +++F K
Sbjct: 395 GNYNKYYGYRNPGASE--------DPRIRLLRPEWFEGKDVLDLGCNSGHLTLYIAKMLRPARILGLDIDNSLVHAARKNIRHYLSELQTQEARRVMQEK------------------------KSPKQEERNGDGDESHMGI--------------EKKHNKDENRNENGKPVTGE----------SGPAEAVNDNDCHTDETGTQRQDSKAEEMEQEDCKSPPADHSVSCSFPVSLRISRGPIAAPPLTETFTTRPGEFPSNVSFIKANYV-LENDSLLLTQRPE--YDLILCLSVTKWVHLNWGDSGLKRLFKRVYRHLRPGGKFILEPQPWESY---VRRKKLTDNINRNYHSICLKPDQFSSYLTTEVGFTSFEYLGSPKCSVRGF-QRPVYLFHK 732
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: H3GI20_PHYRM (RNA methyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI20_PHYRM) HSP 1 Score: 131 bits (330), Expect = 5.030e-30 Identity = 114/335 (34.03%), Postives = 149/335 (44.48%), Query Frame = 3
Query: 75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
DPRL L RSWFEGK LD+GCN G T+ I ++ P ++GVD+D L+ AR L K+ R+ E AF P + + + STA+ E +S A V + GES + K E E + G+A + + R KP N+A+V A G F + F+ ED V +AH G YD + FSV KW+HL GD+ ++ VF K +ELL PGGRLI EPQPWKSY K R+ AN KI +RP DF L VGF+S E L
Sbjct: 57 DPRLASLDRSWFEGKHGLDIGCNSGEFTITIAKRLAPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AFG--------EIPAAKTTAKNEDS--STAAGGEAADSPADVSGETSAGESKQE---KTEEEEKKSGDGDAFANEMPLSFRLW---------KPSMQNQAAVPRAIGKA----AVGSVFPLNVI---------------FKREDIVSDAHAGKNYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLIFEPQPWKSYHK--RKFTSEVTAANYPKIELRPKDFPKHLIDTVGFQSCEFL 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5998.13529.1 >prot_H-elongata_contig5998.13529.1 ID=prot_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp MVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGback to top mRNA from alignment at H-elongata_contig5998:1112..4411+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5998.13529.1 ID=mRNA_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3300bp|location=Sequence derived from alignment at H-elongata_contig5998:1112..4411+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5998:1112..4411+ >mRNA_H-elongata_contig5998.13529.1 ID=mRNA_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1902bp|location=Sequence derived from alignment at H-elongata_contig5998:1112..4411+ (Himanthalia elongata Himel1 dioecious)back to top |