mRNA_H-elongata_contig59891.13519.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A097ITX1_9PHAE (Alanine transaminase n=8 Tax=Sargassum TaxID=3015 RepID=A0A097ITX1_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 9.060e-145 Identity = 202/235 (85.96%), Postives = 221/235 (94.04%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLC NT+GQLAMG+MVNPPK GDPS++TF+KER DILSSLRRRS+MVH+A+N++EGITCN+ADGALY FPRIRLS KA +AA KGIPTDEYYCL+ILD TGIILVPGSGF QE+DTLHFRTTFL +EDTM++TL + ASAH+KFMD HRD
Sbjct: 267 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCSNTVGQLAMGMMVNPPKPGDPSYQTFEKERGDILSSLRRRSMMVHKALNEMEGITCNKADGALYAFPRIRLSNKAVQAAADKGIPTDEYYCLKILDETGIILVPGSGFGQEEDTLHFRTTFLPSEDTMEETLKVLASAHNKFMDDHRD 501
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A097ITX3_SCYLO (Alanine transaminase n=6 Tax=Ectocarpales TaxID=2877 RepID=A0A097ITX3_SCYLO) HSP 1 Score: 410 bits (1053), Expect = 8.830e-140 Identity = 196/235 (83.40%), Postives = 212/235 (90.21%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
KLV+LADEVYQ+NIWKEGASFSSFKKVACDMGY GEDGD+RLQLVSFHSTSKGYFGECGLRGGYMEVHGIG EVRAELYKLASLSLC NT+GQLA GIM+NPPK GDPSFETFQKERDDILSSL RRS+MVH+A+N LEGITCN ADGALY FPRIRLS+KAK AA A G+P DEYYCLQILD +GI+LVPGSGF QE+ TLHFRTTFL AE+TM +TL + A AH KFMD HRD
Sbjct: 266 KLVVLADEVYQANIWKEGASFSSFKKVACDMGYTGEDGDDRLQLVSFHSTSKGYFGECGLRGGYMEVHGIGAEVRAELYKLASLSLCSNTVGQLATGIMINPPKPGDPSFETFQKERDDILSSLERRSIMVHKALNDLEGITCNEADGALYAFPRIRLSDKAKRAAEANGVPADEYYCLQILDQSGIVLVPGSGFGQEEGTLHFRTTFLPAEETMHETLKIMAKAHEKFMDEHRD 500
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A097ITY2_9PHAE (Alanine transaminase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097ITY2_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 1.990e-135 Identity = 188/235 (80.00%), Postives = 210/235 (89.36%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
K+V+LADEVYQ+NIWK+GASFSSFKKVACDMGY GEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIG EVRAELYKL+SLSLC NT+GQLA G+M+NPPK GDPSFETF++ERD ILSSL+RRS+MVH+A+N+LEGITCN ADGALY FPRIRLS+KA A KG+P DEYYCLQ+LD +GI+LVPGSGF QE+ TLHFRTTFL AE+TM TL FA AH KFMD HRD
Sbjct: 263 KMVVLADEVYQANIWKKGASFSSFKKVACDMGYSGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGAEVRAELYKLSSLSLCSNTVGQLAAGLMINPPKKGDPSFETFEQERDGILSSLKRRSIMVHKALNELEGITCNEADGALYAFPRIRLSKKASNTAEGKGVPADEYYCLQMLDESGIVLVPGSGFGQEEGTLHFRTTFLPAEETMHDTLKRFAKAHKKFMDEHRD 497
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A097ITY9_SACJA (Alanine transaminase n=3 Tax=Laminariales TaxID=2886 RepID=A0A097ITY9_SACJA) HSP 1 Score: 395 bits (1016), Expect = 3.680e-134 Identity = 190/235 (80.85%), Postives = 208/235 (88.51%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
KLV++ADEVYQSNIWK+ ASFSSFKKVACDMGY G +GDERLQLVSFHSTSKGY+GECGLRGGYMEVHGIG EVRAELYKL+SLSLC NTIGQLA GIM+NPPK GDPS+ETF KERDDILSSL RRS+MVH A+N LEG+TCNRADGALY FPRIRLS KAK+AA AKG+P DE+YCL+ILD +GI+LVPGSGF QE DTLHFRTTFL AE TM +TL A AH KFMD HRD
Sbjct: 267 KLVVIADEVYQSNIWKKDASFSSFKKVACDMGYTGAEGDERLQLVSFHSTSKGYYGECGLRGGYMEVHGIGAEVRAELYKLSSLSLCSNTIGQLATGIMINPPKKGDPSYETFTKERDDILSSLERRSIMVHTALNDLEGVTCNRADGALYAFPRIRLSNKAKKAAEAKGVPADEFYCLEILDQSGIVLVPGSGFGQEDDTLHFRTTFLPAEATMHETLKNLARAHEKFMDEHRD 501
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A097ITY8_9PHAE (Alanine transaminase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097ITY8_9PHAE) HSP 1 Score: 382 bits (982), Expect = 4.720e-129 Identity = 181/235 (77.02%), Postives = 207/235 (88.09%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
KLVILADEVYQ+NIWK+GASFSSFKKVACDMG G+DGD+RLQLVSFHSTSKG+ GECGLRGGYMEVHGIGPEVRAELYKLASLSLC NT+GQLA G+M+NPP+ G+PS+ET++KERDDILSSL RRS MVH+A+N+LEG+TCN A+GALY FPRIRLS++AK+ A KG+P DEYYCL++LD TGIILVPGSGF QE TLHFRTTFL AED M T+ A AH+ FMD HRD
Sbjct: 264 KLVILADEVYQANIWKKGASFSSFKKVACDMGLTGKDGDDRLQLVSFHSTSKGFLGECGLRGGYMEVHGIGPEVRAELYKLASLSLCSNTVGQLATGLMINPPREGEPSYETYRKERDDILSSLERRSRMVHKALNELEGVTCNEAEGALYAFPRIRLSKRAKDVAEGKGLPGDEYYCLKMLDETGIILVPGSGFGQEDGTLHFRTTFLPAEDIMHDTIKRLAKAHAAFMDAHRD 498
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A835ZD97_9STRA (Alanine transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD97_9STRA) HSP 1 Score: 300 bits (769), Expect = 3.920e-97 Identity = 141/232 (60.78%), Postives = 174/232 (75.00%), Query Frame = 1
Query: 4 LVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRH 699
LV++ADEVYQ+N+W++ F SFKKVACD+GY E GD RLQLVSFHSTSKGY GECG+RGGYME+HGI +++A+LYKLASLSLC NT GQ+ MG+MVNPPK GD S F KERD IL S+ RR+ ++ +A+N LEG++CN DGALY FP I LS+KA++ A +GIP DEYYCL++L+ GII VPGSGF Q T HFRTTFL E+ L + H+ FM H
Sbjct: 246 LVVIADEVYQANVWQQERPFVSFKKVACDLGYTAEPGDHRLQLVSFHSTSKGYMGECGVRGGYMELHGISDDIKAQLYKLASLSLCSNTAGQVMMGLMVNPPKEGDKSHALFAKERDAILDSMFRRAKLLSDALNTLEGVSCNSVDGALYAFPTITLSKKARDIAKERGIPADEYYCLEMLERAGIIFVPGSGFGQAHGTYHFRTTFLPPENKFPIMLERIKAGHASFMKDH 477
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A6V2S6R4_HETAK (Alanine transaminase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2S6R4_HETAK) HSP 1 Score: 275 bits (703), Expect = 5.370e-90 Identity = 132/238 (55.46%), Postives = 173/238 (72.69%), Query Frame = 1
Query: 4 LVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDG----DERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
L++ ADEVYQ N+W+EG F SF+KVA +MGY GE+ E LQLVSFHS SKG+ GECGLRGGY +VHGI A++YKLAS+SLC NT+GQL G+M P+ G PSF+ F +ERD IL S+RRR+ + A+N+LEG++CN A GA+YVFPRI L +A AA A+G+ D +YC+++L+ TGII+VPGSGF Q++ T HFRTTFL +E M + A H+ FMD++RD
Sbjct: 29 LILCADEVYQENVWEEGKEFVSFRKVAIEMGYTGEEEITKPGEGLQLVSFHSVSKGFLGECGLRGGYFQVHGIPAAAAAQVYKLASISLCSNTVGQLTTGLMCALPRPGSPSFKKFARERDAILGSMRRRAGQLGAALNRLEGVSCNSAQGAMYVFPRITLPRRAVAAAAAEGVAPDAFYCMRLLEATGIIVVPGSGFGQQEGTWHFRTTFLPSEARMAGVVDRLARFHAAFMDQYRD 266
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A7S2UXD2_9STRA (Alanine transaminase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXD2_9STRA) HSP 1 Score: 276 bits (707), Expect = 7.190e-89 Identity = 130/234 (55.56%), Postives = 173/234 (73.93%), Query Frame = 1
Query: 1 KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHR 702
KLV+ ADEVYQ NIW E F+SFKKV DMG+ E+G+ R QL+SFHSTSKG+ GECGLRGGY E+ G PEVRA+LYKLAS+SLC NTIGQ+A+G+MV+PPK D S ++KE+ IL S++RRS+ + EA+NKLEG++CN + GA+Y FP+I + KA + A KG+ D YC+ L+ TGI++VPGSGF Q + T HFRTTFL ++D +D + + H FM+++R
Sbjct: 161 KLVLCADEVYQENIWTEVNPFTSFKKVVKDMGFE-EEGENRFQLISFHSTSKGFIGECGLRGGYFEMFGFTPEVRAQLYKLASVSLCSNTIGQIALGLMVDPPKMSDASSAVYEKEKTAILGSMKRRSIKLVEALNKLEGVSCNLSQGAMYAFPQITIPAKAAKEADMKGVKPDVMYCMDCLEATGIVMVPGSGFGQVEGTWHFRTTFLPSDDQIDSVIDKISKFHQCFMEKYR 393
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A176VX62_MARPO (Alanine transaminase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VX62_MARPO) HSP 1 Score: 263 bits (671), Expect = 8.600e-82 Identity = 128/234 (54.70%), Postives = 169/234 (72.22%), Query Frame = 1
Query: 4 LVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
L++LADEVYQ NI++E +F SFKKVA MG+ +D L LVS+HS SKGY+GECG RGGYMEV G+ EVR +LYK+AS++LC N GQ+ M +++NPPK GD S++ F KERD ILSSL RR+ ++ +AMNKLEG+TCN+A+GA+YVFPR+ L E+A +AA A + D +Y ++LD TGI++VPGSGF Q T HFR T L E + +A F H +FM+ RD
Sbjct: 302 LLLLADEVYQENIYEETKTFHSFKKVARSMGFFDKD----LSLVSYHSVSKGYYGECGKRGGYMEVTGLDAEVRDQLYKVASVNLCSNITGQILMSLVMNPPKPGDESYDNFTKERDGILSSLARRAQLMTDAMNKLEGVTCNKAEGAMYVFPRLNLPERAMKAAAAVQMLPDVFYARRLLDATGIVVVPGSGFGQVPGTHHFRCTILPQEGKLPDVIAKFTQFHERFMEEFRD 531
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Match: A0A446KRI3_TRITD (Alanine transaminase n=4 Tax=Triticum TaxID=4564 RepID=A0A446KRI3_TRITD) HSP 1 Score: 259 bits (662), Expect = 9.160e-82 Identity = 128/234 (54.70%), Postives = 161/234 (68.80%), Query Frame = 1
Query: 4 LVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTSKGYFGECGLRGGYMEVHGIGPEVRAELYKLASLSLCPNTIGQLAMGIMVNPPKAGDPSFETFQKERDDILSSLRRRSLMVHEAMNKLEGITCNRADGALYVFPRIRLSEKAKEAATAKGIPTDEYYCLQILDTTGIILVPGSGFKQEKDTLHFRTTFLAAEDTMDKTLALFASAHSKFMDRHRD 705
LV+LADEVYQ NI+ E F SFKK+A MGY +D L LVSF S SKGY+GECG RGGYMEV G +VR ++YK+AS++LC N GQ+ +++NPPK GD S+E+F ERD I+SSL RR+ + EA N LEGITCN+A+GA+Y+FPR+ L +KA AA A G D YY L++L TGI++VPGSGF Q T HFR T L ED + ++ F H KFMD RD
Sbjct: 172 LVLLADEVYQENIYVEDKQFHSFKKIARSMGYTDDD----LPLVSFQSVSKGYYGECGKRGGYMEVTGFNADVREQIYKVASVNLCSNISGQILSSLIMNPPKVGDESYESFMVERDGIISSLARRAKALEEAFNSLEGITCNKAEGAMYLFPRLHLPQKAIGAAQAAGAAPDAYYALRLLQATGIVVVPGSGFGQAPGTYHFRCTILPQEDKIPAIISRFKEFHEKFMDEFRD 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59891.13519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59891.13519.1 >prot_H-elongata_contig59891.13519.1 ID=prot_H-elongata_contig59891.13519.1|Name=mRNA_H-elongata_contig59891.13519.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp KLVILADEVYQSNIWKEGASFSSFKKVACDMGYHGEDGDERLQLVSFHSTback to top mRNA from alignment at H-elongata_contig59891:6..2658+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59891.13519.1 ID=mRNA_H-elongata_contig59891.13519.1|Name=mRNA_H-elongata_contig59891.13519.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2653bp|location=Sequence derived from alignment at H-elongata_contig59891:6..2658+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59891:6..2658+ >mRNA_H-elongata_contig59891.13519.1 ID=mRNA_H-elongata_contig59891.13519.1|Name=mRNA_H-elongata_contig59891.13519.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig59891:6..2658+ (Himanthalia elongata Himel1 dioecious)back to top |