mRNA_H-elongata_contig59863.13512.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: D7FU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU92_ECTSI) HSP 1 Score: 268 bits (685), Expect = 2.480e-82 Identity = 134/220 (60.91%), Postives = 173/220 (78.64%), Query Frame = 1
Query: 1 KRAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAFGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRVIFPS 660
+ AAPFPW+ M PAAWA VAGNVGAG INV++SWLP+YYE+F+ VDL++I + + P+LTMM FSVLGG++Y WL N RG+ +A +SK++ G +F ++ VF CMGL S AT++SSLALASAA SRGGWSTNH+EIAAPEHAA+LYS+AN++SAA+SVL IS+TGK+LD FG +AW TAAMG+IGA+C CG+ FV+FA D V+FP+
Sbjct: 436 RTAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPEHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPQAW--TAAMGTIGALCGACGVLFVLFARGDEVLFPA 653
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A6H5JPQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ5_9PHAE) HSP 1 Score: 264 bits (674), Expect = 9.960e-81 Identity = 132/220 (60.00%), Postives = 171/220 (77.73%), Query Frame = 1
Query: 1 KRAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAFGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRVIFPS 660
+ AAPFPW+ M PAAWA VAGNVGAG INV++SWLP+YYE+F+ VDL++I + + P+LTMM FSVLGG++Y WL N RG+ +A +SK++ G +F ++ V CMGL S AT++SSLALASAA SRGGWSTNH+EIAAP+HAA+LYS+AN++SAA+SVL IS+TGK+LD FG AW TAAMG+IGA+C CG+ FV+FA D V+FP+
Sbjct: 441 RNAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFMLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVLPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPQHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPEAW--TAAMGTIGALCGACGVLFVLFARGDEVLFPA 658
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A0D2NGN3_GOSRA (MFS domain-containing protein n=29 Tax=Malvoideae TaxID=214907 RepID=A0A0D2NGN3_GOSRA) HSP 1 Score: 115 bits (288), Expect = 1.440e-26 Identity = 73/220 (33.18%), Postives = 119/220 (54.09%), Query Frame = 1
Query: 4 RAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAF-----GDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
+A PWKK+++S WA V N A+ VL++WLP+Y+E +Q+ LQE+G +++ P+L M LFS +GG+ L R +S T K + V F A + L + + + A L SS+AL A R G++ NH++IA P +A I+ ++NT + ++ + MTG++L+A G +P W A G +C F+VF+ +R+
Sbjct: 226 KATKIPWKKILISRPVWAIVVNNFTFHYALYVLMNWLPTYFEQGLQLSLQEMG-SSKMMPYLNMFLFSNIGGIVADHLVTKRVMSVTKTRKFLNTVGFIVASIALLALPIFRTSGGAILCSSVALGFLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIIGVDMTGRLLEAAKIEYSGLSSPES---WRAVFFIPGWLCIFSSFIFLVFSTGERI 440
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A067JZ11_JATCU (MFS domain-containing protein n=5 Tax=Malpighiales TaxID=3646 RepID=A0A067JZ11_JATCU) HSP 1 Score: 114 bits (284), Expect = 5.300e-26 Identity = 69/219 (31.51%), Postives = 121/219 (55.25%), Query Frame = 1
Query: 4 RAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDA----FGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
R A PWK+++VS WA VA N A+ VL++WLP+Y+E +Q+ LQ++G +++ P+ M +FS +GG+ L R +S T K + + F A + + + + T A L SS+AL S A R G++ NH++IA P +A I+ ++NT + ++ + +TG++L+A + D + +W A G +C F++F+ +R+
Sbjct: 226 RTAKIPWKRILVSLPVWAIVANNFTFHYALYVLMNWLPTYFEQGLQLSLQQMG-SSKMMPYFNMFIFSNIGGVLADHLITKRILSVTRTRKFLNTIGFLVASLALMVLPFFRTSTGAVLCSSVALGSLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIIGVDLTGRLLEAAKLSYSDISSPESW--RAVFVIPGLLCILSSFMFLLFSTGERI 440
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A1Q3ANW1_CEPFO (MFS_1 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ANW1_CEPFO) HSP 1 Score: 112 bits (281), Expect = 1.800e-25 Identity = 68/218 (31.19%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 1 KRAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAFGDDAP--ARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
+ AA PWKK+++S W VA N A+ VL++WLP+Y+E +Q+ LQ++G +++ P+L M LFS +GG+ L R +S T K++ V F A + + + + + A SS+AL A R G++ NH++IA P +A IL ++NT + ++ + +TGK+L+A + + +W G +C F++F+ +R+
Sbjct: 252 RAAAKIPWKKIMISVPVWTIVANNFTFHYALYVLMNWLPTYFEQGLQLSLQDMG-SSKMMPYLNMFLFSNIGGVIADHLITKRILSVTKTRKVLNTVGFTIASIALMALPIFRTSNGAVFCSSVALGFLALGRAGFAVNHMDIA-PRYAGILMGVSNTAGTLAGIIGVDLTGKLLEAAKTASSDLSSPESWRVVFFIPGLLCVCSSFLFLLFSTGERI 467
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A7J7LG39_9MAGN (MFS domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LG39_9MAGN) HSP 1 Score: 108 bits (270), Expect = 4.790e-24 Identity = 66/218 (30.28%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 1 KRAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAF--GDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
K A PWK++++S WA V N A+ VL+SWLP+Y+E + + LQE+G +++ P+L M +FS +GG+ +L R +S T K + + F +A + + + S + A SS+AL A R G++ NH++IA P +A I+ ++NT + ++ +++TG++L+A + +W + G +C + F++F+ +RV
Sbjct: 222 KNAVNVPWKRILLSLPVWAIVVNNFTFHYALYVLMSWLPTYFEQGLGLSLQEMG-SSKMLPYLNMFVFSNIGGVAADYLITRRIMSVTKTRKFLNTIGFIAASIALMALPFFRSSSGAVFCSSVALGFLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIVGVALTGQLLEAAKSAHSDLSSPESWKSVFFIPGYLCMFSSVVFLLFSTGERV 437
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A7I8KAL1_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KAL1_SPIIN) HSP 1 Score: 108 bits (270), Expect = 4.920e-24 Identity = 70/215 (32.56%), Postives = 114/215 (53.02%), Query Frame = 1
Query: 16 FPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDAF-GDDAP---ARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
PW K+ +SPA WA V N A+ VL++WLP+Y+E ++V LQE+G +++ P+L M +FS LGG L R +S T K++ + F +A + + S SS +L A R G++ NH+++A P +A I+ ++NT + ++ + +TG IL+A G A + A AW G +C FF+VF+ +R+
Sbjct: 228 IPWGKIFLSPAIWAIVVNNFTFHYALYVLMNWLPTYFEQGLEVSLQEMG-SSKMLPYLNMFVFSNLGGWAADHLITRRVLSVTRTRKLLNTMGFVTAAAALVALPSFRSAAGGVACSSASLGFLALGRAGFAVNHLDVA-PRYAGIVMGVSNTAGTLAGIIGVGLTGSILEAAKGGSATGDLSTAAAWRPVFFVPGYLCLFSAAFFLVFSTGERI 440
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A061E1Q6_THECC (Phosphate transporter 4,6 n=3 Tax=malvids TaxID=91836 RepID=A0A061E1Q6_THECC) HSP 1 Score: 108 bits (269), Expect = 6.790e-24 Identity = 67/219 (30.59%), Postives = 118/219 (53.88%), Query Frame = 1
Query: 4 RAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDA----FGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
R A PWK+++VS WA V N A+ VL++WLP+Y+E +Q+ LQE+G +++ P+ M +FS +GG+ L R +S T K + + F A + + + + + A SS+AL A R G++ NH++IA P +A I+ ++NT + ++ + MTG++L+A + D + +W A G +C F++F+ +R+
Sbjct: 226 RTAQIPWKRILVSGPVWAIVVNNFTFHYALYVLMNWLPTYFEQGLQLSLQEMG-SSKMMPYFNMFIFSNIGGVLADHLITKRIMSVTKTRKFLNTIGFIIASLALMALPIFRTSGGAIFCSSVALGFLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIIGVDMTGQLLEAAKAVYSDLSSPESW--RAVFFIPGLLCIFSSFIFLLFSTGERI 440
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: B9HPN6_POPTR (MFS domain-containing protein n=5 Tax=Saliceae TaxID=238069 RepID=B9HPN6_POPTR) HSP 1 Score: 108 bits (269), Expect = 6.790e-24 Identity = 68/219 (31.05%), Postives = 119/219 (54.34%), Query Frame = 1
Query: 4 RAAPFPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDA----FGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
R A PWK++ VS WA V N A+ VL++WLP+Y+E +Q+ LQE+G +++ P+ M +FS +GG+ L R +S T K++ V F A + + + + + + A SS+AL A R G++ NH++IA P +A I+ ++NT + ++ + +TGKIL+A + D + +W + G +C F++F+ +R+
Sbjct: 226 RTARIPWKRIFVSLPIWAIVVNNFTFHYALYVLMNWLPTYFEQGLQLSLQEMG-SSKMMPYFNMFIFSNIGGVVADHLITKRILSVTRTRKLLNTVGFLVASLALIALPIFRTSSGAVFCSSVALGFLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIIGVDLTGKILEAATTTYSDLSSPESWRSVFVIP--GLLCIFSTFVFLLFSTGERI 440
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Match: A0A0K9QLN7_SPIOL (MFS domain-containing protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QLN7_SPIOL) HSP 1 Score: 107 bits (267), Expect = 1.290e-23 Identity = 65/213 (30.52%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 16 FPWKKMIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFPHLTMMLFSVLGGMTYCWLTNDRGVSKALTSKIITGVSFFSALVVFLCMGLADSPTMATLLSSLALASAAASRGGWSTNHVEIAAPEHAAILYSLANTVSAASSVLSISMTGKILDA--FGDDAPARAWAWTAAMGSIGAVCATCGIFFVVFADSDRV 648
PWKK++VS WA V N A+ VL++WLP+Y+E +Q+ LQE+G +++ P+L M LFS +GG+ L + +S T K + + F A + + + + + + A SS+AL A R G++ NH++IA P +A I+ ++NT + ++ + +TG++L+A D + +W G +C + F++F+ +R+
Sbjct: 230 IPWKKILVSLPVWAIVVNNFTFHYALYVLMNWLPTYFEQGLQLSLQEMG-SSKMMPYLNMFLFSNIGGVVADHLITRKLMSVTGTRKFLNTLGFIVASLALMALPMFRTASGAVFCSSVALGFLALGRAGFAVNHMDIA-PRYAGIVMGVSNTAGTLAGIVGVELTGQLLEAAKVADFDISSPESWRLVFVIPGILCILSSVVFMIFSTGERI 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59863.13512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59863.13512.1 >prot_H-elongata_contig59863.13512.1 ID=prot_H-elongata_contig59863.13512.1|Name=mRNA_H-elongata_contig59863.13512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp MIVSPAAWACVAGNVGAGTAINVLISWLPSYYEDFIQVDLQEIGLVAQIFback to top mRNA from alignment at H-elongata_contig59863:307..1246- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59863.13512.1 ID=mRNA_H-elongata_contig59863.13512.1|Name=mRNA_H-elongata_contig59863.13512.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=940bp|location=Sequence derived from alignment at H-elongata_contig59863:307..1246- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59863:307..1246- >mRNA_H-elongata_contig59863.13512.1 ID=mRNA_H-elongata_contig59863.13512.1|Name=mRNA_H-elongata_contig59863.13512.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1260bp|location=Sequence derived from alignment at H-elongata_contig59863:307..1246- (Himanthalia elongata Himel1 dioecious)back to top |