mRNA_H-elongata_contig5986.13511.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: D7G0G4_ECTSI (ATP binding / ATP-dependent helicase/ DNA binding / DNA-directed DNA polymerase/ helicase/ nucleic a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0G4_ECTSI) HSP 1 Score: 767 bits (1981), Expect = 4.320e-257 Identity = 444/801 (55.43%), Postives = 539/801 (67.29%), Query Frame = 1
Query: 1 RFYITRTGQKLTGREAYMTAYEDRQARAASGGENIVDRLTIMKTGQKDNADSPRNALRGEKYVHDDALKLSTYGVPDELVRGVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMVSPAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAKGGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQQIDGDNLARACDSALDFLLKNNFVIV----TAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPLEGIEPDWRRFREEYTGWSENDPSRVVGKAV 2391
+FYI+ +GQKL+GREA A ED++ G DR IM+ GQ S + A GEKY+H+DALKL TY +P++LV + SAPTSGGKTLVAE+LLLRALL+H GTMALLVVP++ALA+EKR+YLR+VW+PLQLNIQAYHG EGG D M GVNVA+CTMEKANSIVNRLAEEKRL ALSAVVVDEMHLI D RGFLLELML+K R++ P VQL+CLSATLPNI+ +AKWLDASLYRT +RPVELRH VC+ R VY P+R GG G AG + G +VVGGDIK++G TSP+ DPDGV+DLVKDAL +DMSVLVFC+TK+WC+ A LLA E++S++ AA+ GGK +T +R+ + T+ D VR++LR+TPVGLDADL++LV G+AFHHSGLVVEERSILE+ FR+G+IRVLVATSTLAAGVNLPAHRVIIRSP++G+ +LDSTRYHQMAGRSGRAGVSRG+EG G + +G GESFLI+PKN K T+ ASKLI+APLP+L+SAL A+GGGLERALLEV+VS TV++R GA RF T LA QI D + +ACDSA+ +LLK+NFV+ + E DY VA TQLG+A TFFSGLSP AAVDV+ SLDKAC + VA++LHAL L+TPL+GIEP+W RFREEY S +DP RVVG+ +
Sbjct: 650 QFYISLSGQKLSGREATRVAAEDQKRVKEGLGPVTKDRSAIMRIGQGKEPPSCQEAHGGEKYLHEDALKLGTYKIPEQLVESYAK------------------------SAPTSGGKTLVAELLLLRALLKHSGTMALLVVPYVALALEKRDYLRDVWSPLQLNIQAYHGGEGG-DGSDMEGVNVAICTMEKANSIVNRLAEEKRLAALSAVVVDEMHLIGDRARGFLLELMLTKQRLLCPNNVQLICLSATLPNIECLAKWLDASLYRTAYRPVELRHFVCQGRAVYRPTRIRGTGG--GAAGGDDEGTLEKVVGGDIKRVGGTSPSADPDGVVDLVKDALARDMSVLVFCSTKKWCQQTATLLAKEVLSDRNRAAE----------------------------GGK------------------------------------------------------ATERRRGASSPTTADD--------------VREKLRQTPVGLDADLSYLVGTGIAFHHSGLVVEERSILEEAFRQGSIRVLVATSTLAAGVNLPAHRVIIRSPSVGIGLLDSTRYHQMAGRSGRAGVSRGEEG--GKAVQGVDT-ARGESFLILPKNVKFTLSDASKLISAPLPKLESALRDAEGGGLERALLEVIVSMTVTSREGARRFSCKTLLAAQIPEDEVLKACDSAMAYLLKHNFVVQRGGDSVEGCADYDVAPTQLGRA--TFFSGLSPSAAVDVFESLDKACQNFAVASDLHALVLVTPLDGIEPNWGRFREEYLACSTDDPVRVVGELI 1322
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: UPI00077A6539 (DNA polymerase theta-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6539) HSP 1 Score: 330 bits (847), Expect = 1.580e-93 Identity = 258/759 (33.99%), Postives = 374/759 (49.28%), Query Frame = 1
Query: 160 RNALRGEKYVHDDALKLSTYGVPDELVR-----GVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKR-LEALSAVVVDEMHLIADGQRGFLLELMLSKLRMVS--------------PAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAK-GGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQ---QIDGDNLARACDSALDFLLKNNFVIV-----TAEKHHDYGVAS---------TQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPLEGIEPDW 2322
R+ L + + L+LS++G+P +++ G+ R+F WQA CLR GK L+G NLVYSAPTS GKT+VAE+L+L+ +L+ AL ++PFI++ EK YL+ ++ + + + GS G +G V+VAVCT+EKANS++NRL EEK+ L +L VVVDEMH+I D RG+LLEL L+K+R +S PA +Q+V +SATLPN+D +AKWL A LY T+ RPV L + ++ GN + I++I + A D D VI L K+ + + SVLVFC TK WC+ A +A +L + +N GKD+ FV K+ +L+ + +A+ V ++L+ T VGLD+ L+ LV VAFHH+GL +ER I+E FR+G++RVLVATSTL++GVNLPA RVIIR+P ++D+ Y QMAGR+GR GV GES LI ++ + + L+ + L +KS L+G + GG++RALLEV+ S V+ R+ TF A Q + D+ + FL++N FV + E GV TQLG A T S LSP A+ V+ + KA + +ELH +Y +TP+ I+ W
Sbjct: 227 RSILEPDNVLSGSPLELSSWGLPPVVLKRYHEMGITRMFDWQAECLRT--GKVLTGGNLVYSAPTSAGKTMVAELLMLKRVLETKRK-ALFILPFISVTREKMFYLQRLYQEAGVRVDGFMGSHA--PLGGVGSVDVAVCTIEKANSLLNRLLEEKKALSSLGIVVVDEMHMIGDPHRGYLLELFLTKIRYISGFTGDTRNEDSDTSPA-IQIVGMSATLPNLDMLAKWLSADLYFTDHRPVPLTEMIKIGSTLF-------------------DGNLTK-----IREISGGTVAGDEDHVIPLCKETITEGHSVLVFCPTKNWCEKLAESIARHFAEIGSLGLQEDRN-------------------------GKDQ---GEGFV--KASALITFD---------------------------------------------------------YVALKEVIEQLKRTQVGLDSVLSRLVPHAVAFHHAGLTFDERDIIEGAFRQGSVRVLVATSTLSSGVNLPARRVIIRTPIFHGKLVDALVYKQMAGRAGRKGVD-----------------ALGESVLICKPAERQKV---TSLLNSQLKAVKSCLLGKEDNGGIKRALLEVISSGVVTRPLDVERYAGCTFFASVPLQQEADDTDAVIKETVTFLVENEFVRLQKCDENTEDKKQEGVEGQLDEQRYVPTQLGMA--TLASALSPDEALVVFAEVQKARKCFVLESELHVIYQVTPIY-IQDQW 845
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: UPI001CF3C4FA (DNA polymerase theta-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3C4FA) HSP 1 Score: 331 bits (848), Expect = 4.430e-93 Identity = 258/758 (34.04%), Postives = 375/758 (49.47%), Query Frame = 1
Query: 160 RNALRGEKYVHDDALKLSTYGVPDELVR-----GVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKR-LEALSAVVVDEMHLIADGQRGFLLELMLSKLRMVS--------------PAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAK-GGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQ---QIDGDNLARACDSALDFLLKNNFVIV-----TAEKHH--------DYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPLEGIEPDW 2322
R+ L + + L+LS++G+P +++ G+ R+F WQA CLR GK L+G NLVYSAPTS GKT+VAE+L+L+ +L+ AL ++PFI++ EK YL+ ++ + + + GS G +G V+VAVCT+EKANS++NRL EEK+ L +L VVVDEMH+I D RG+LLEL L+K+R +S PA +Q+V +SATLPN+D +AKWL A LY T+ RPV L + ++ GN + I++I + A D D VI L K+ + + SVLVFC TK WC+ A +A +L + +N GKD+ FV K+ +L+ + +A+ V ++L+ T VGLD+ L+ LV VAFHH+GL +ER I+E FR+G+IRVLVATSTL++GVNLPA RVIIR+P ++D+ Y QMAGR+GR GV GES LI ++ + + L+ + L +KS L+G + GG++RALLEV+ S V+ R+ TF A Q + D+ + FL++N FV + EK + + TQLG A T S LSP A+ V+ + KA + +ELH +Y +TP+ I+ W
Sbjct: 207 RSILEPDNILSGSPLELSSWGLPPAVLKRYHEMGITRMFDWQAECLRT--GKVLTGGNLVYSAPTSAGKTMVAELLMLKRVLETKRK-ALFILPFISVTREKMFYLQRLYQEAGVRVDGFMGSHA--PPGGVGTVDVAVCTIEKANSLLNRLLEEKKALSSLGIVVVDEMHMIGDPHRGYLLELFLTKIRYISGFTGDTRNQDSVTSPA-IQIVGMSATLPNLDMLAKWLSADLYFTDHRPVPLTEMIKIGSTLF-------------------DGNLTK-----IREISGGTVAGDEDHVIPLCKETITEGHSVLVFCPTKNWCEKLAESIARHFAEIGSLGLQEDRN-------------------------GKDQ---GEGFV--KASALITFD---------------------------------------------------------YVALKEVIEQLKRTQVGLDSVLSRLVPHAVAFHHAGLTFDERDIIEGAFRQGSIRVLVATSTLSSGVNLPARRVIIRTPIFHGKLVDALVYKQMAGRAGRKGVD-----------------ALGESVLICKPAERQKV---TSLLNSQLKAVKSCLLGKEDNGGIKRALLEVISSGVVTRPLDVERYAGCTFFASVPSQQEADDTDAVIKETVKFLVENEFVRLQKCDENTEKANKAVEGQLDEQRYVPTQLGMA--TLASALSPDEALVVFAEVQKARKCFVLESELHVIYQVTPIY-IQDQW 824
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: A0A7M7PEQ8_STRPU (DNA-directed DNA polymerase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PEQ8_STRPU) HSP 1 Score: 330 bits (847), Expect = 6.680e-93 Identity = 244/756 (32.28%), Postives = 359/756 (47.49%), Query Frame = 1
Query: 196 DALKLSTYGVPDELVR-----GVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMV------SPAKV--------QLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPA----VDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVR---KRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAKG----GGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQQID---------GDNLARACDSALDFLLKNNFVI---VTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPL--EGIEPDWRRF 2331
D L LS++G+PD +++ G+ ++FPWQ CL G+ L G NLVY+APTS GKTLVAE+L+L+ +L+ AL+++PF+++ EK YL+ +++ + + + GS G + ++A+CT+EKANS++NRL EEK + L VVVDE+H+I D RG+LLEL+L+K+R V SP V Q+V +SATLPN+D +A+WLDA LYRT+FRPV L V + V+ S + K+ + P VD D V L + + K VLVFC TK WC+ ++A EI + + + V T V S P+ + A +R ++LR TPV +++ L + GV +HH+GL +ER I+E FR G +++LVATSTL++GVNLPA RVIIRS ++D Y QM GR+GR G+ GES L+ ++ +ASKL+ A LP ++S L+ ++G L+RA+LE++ S S+ + S+T LA + G N A S + FL +N F+ V E TQLG+A T S LSP A+ V+ L KA + + ELH LY +TP+ +G +PDW +F
Sbjct: 530 DQLLLSSWGLPDVVLQQYHRAGITKMFPWQVECLGA--GRVLEGGNLVYAAPTSAGKTLVAELLVLKKILETKKK-ALIILPFVSVTREKMFYLQSMFSEAGVRVDGFMGSHS--PPGGLASTDIAICTIEKANSLINRLLEEKTIGQLGIVVVDELHMIGDSHRGYLLELLLTKIRYVTATTLKSPGDVSPSLSNPIQIVGMSATLPNLDLLARWLDADLYRTDFRPVPLTEHVKIGKAVFDSS---------------------------MSKVREVKPPFEVKVDEDQVFSLCLETISKGNGVLVFCPTKNWCEKLCEMMAREIYN------------------------------------------MHQGQVTTNQTGFVKA----------------------------------------------------SNMLPLKLDHASLRDVVEQLRRTPVSINSVLRKTIPCGVGYHHAGLTFDERDIIEGAFRHGFLKILVATSTLSSGVNLPARRVIIRSIMFNRKVIDPLTYKQMIGRAGRKGID-----------------TEGESILVCKTTER---DKASKLMRAELPPVQSCLIKSQGDDLSNSLKRAILEIIASGVASSPTEVQAYASSTLLAASLSEVKTDDQGSGVNTGSAVLSCVKFLEENEFIRLQNVECEGETTEKYCPTQLGKA--TLSSALSPGEALQVFAELQKARKNFVLENELHILYQVTPIYNQGFQPDWYQF 1137
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: UPI001894A03F (DNA polymerase theta-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001894A03F) HSP 1 Score: 312 bits (799), Expect = 8.120e-92 Identity = 246/725 (33.93%), Postives = 346/725 (47.72%), Query Frame = 1
Query: 166 ALRGEKYVHDDALKLSTYGVPDELV-----RGVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVN-RLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLR------MVSPAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAV--DPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAKGGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQQIDGDNLARACDSALDFLLKNNFVIVTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTP 2298
A+ + +D L LS +G+P E+V RGV R+FPWQ CLR N +G NLVYSAPTS GKTLVAE+L+L+ +L+ T A LV+PF++LA EK L E++ + + + G G + GV++AVCT+E+AN+++N L ++ L L +VVDE+HL+ D RG+LLELML+K+ +V P VQ+V +SATL N+ ++AKWL A LY+T+FRPV LR Q++ + + EGP D++ + + DP+G++ L + + ++LVFC T+RWC+ AA LA + G D L R+ + K S + E + +V +RLR TP +D LA + VAFHH+GL +EER +LE FR GTIRVLVAT+TL++GVNLPA RVIIRS N +DS YHQM GR+GR G+ GES L+ D+ P A +L A + S L G+ L RALLEVV S S + T Q G D AL FL+ + V + E D +QLG+A SGLSP A+ + L++A L + ++LH +YL+TP
Sbjct: 63 AVASTEEDSEDPLDLSQWGLPAEVVTGYARRGVQRMFPWQLKCLRTGNVLAGAG-NLVYSAPTSAGKTLVAEILMLKRILETK-TKAFLVLPFVSLAREKELVLAELFGGCGVRVGGFLGQRR--PPGGLSGVDLAVCTIERANNLLNGMLLDQGSLGELGILVVDELHLVGDAHRGYLLELMLTKVAYAQKRGLVGPRGVQVVAMSATLSNLSALAKWLSADLYQTDFRPVPLR-------QLFKLGQDLC----------EGP---------DLRPVHRLPAGASDDPEGLLALCLETWAEGHALLVFCPTRRWCEALAASLARTLQQLVT---------------------------------GTDNPGLPRRELAEKLRSRISAETGQHLV-----------------------------------------------------------ERLRSTPGAMDPALASCLSMQVAFHHAGLTMEERDLLESAFREGTIRVLVATTTLSSGVNLPARRVIIRSANFQGRPIDSLSYHQMVGRAGRMGLD-----------------TQGESILMCRDVDR---PLAQRLSRAEAQPITSCLSGSSTS-LRRALLEVVASGVASKPEELCLYTECTLRHQLCTGGGAKEDLDGALQFLVDHQLVHLQGEDG-DRRYCPSQLGRAVLA--SGLSPDDALSMVGELERARRCLALDSDLHLVYLVTP 641
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: T1IGP0_RHOPR (Uncharacterized protein (Fragment) n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1IGP0_RHOPR) HSP 1 Score: 327 bits (837), Expect = 1.010e-91 Identity = 238/725 (32.83%), Postives = 367/725 (50.62%), Query Frame = 1
Query: 241 RGVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMV---SPAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIK-KIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSAL-MGAKGGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQQIDGDNLARACDSALDFLLKNNFVIVTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPL---EGIEPDWRRFREEYTGWSENDPSRVVGKAV 2391
RG+ +FPWQ CL +++ LSG+NLVYSAPTS GKTLVAE+L+L+ +L+ + ++++PFI++ EK YL+++ + ++ + GS G V+VA+CT+EKANS+VNRL EEK + + VVVDE+HLI D QRG+LLEL+L+K++ + A+VQ+V +SATLPN++ +A WL+A+LY+T+FRP+ L+ + R+V S+ + F + + K Q DP VI L D + K S+LVFC+TK WC+T A +A EI R+ +++ S + L + S+ A++ + ++L++ PVGL++ L + V +HH+GL ++ER I+E FR+ ++V+VATSTL++GVNLPA RVI+RSP+ +D Y QM GR+GR G K GES+LI + D+ +L+ + LP + S L G L+RAL+EV+ S VS R+ + + S T LA D L + S L +L KNNF+ +E + D G+ ++ L AC + S +SP A+ + + LDKA + ++LHA+Y +TP + + DW + + G S N + VGK V
Sbjct: 8 RGISCMFPWQVECLLLED--VLSGQNLVYSAPTSAGKTLVAEILVLKTVLEKRRKV-IIILPFISVVREKVLYLQDILTGSGIRVEGFMGSYN--PPGGFRAVHVAICTIEKANSLVNRLLEEKNFDKIGCVVVDELHLIGDPQRGYLLELLLTKIKYICSRGAAEVQVVGMSATLPNLNDLANWLNATLYKTDFRPIPLKEFLKIGRKVL-DSKEL---------------RFSHEINSTLDIKCKQLFFQDDPGDVIYLCVDTILKGFSILVFCSTKNWCETMAQQIAVEI----------------------------------------------RRIGKSQNESALK--------LREQLNSE---------------------------------------------AISDILEQLKKCPVGLESSLERSISFAVGYHHAGLTMDERDIIEGAFRKNILKVIVATSTLSSGVNLPARRVIVRSPSFAGRRMDILSYKQMIGRAGRMG-----------------KDTEGESYLICTEEDRHF---GEQLVKSELPAVASCLGQGNLSSSLKRALVEVIASGMVSNRSQVLEYTSCTLLAATSSQDILEKTIKSCLIYLEKNNFI--NSETNSD-GMIASPLAVACLS--SSMSPDQAIILLKELDKARQCFVLESDLHAIYQVTPFSVCDHVSIDWMKMFTIWEGLSLN--LQKVGKLV 585
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: A0A5E4M187_9HEMI (DNA-directed DNA polymerase, family A, palm domain,Helicase, C-terminal,Ribonuclease H-like n=2 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4M187_9HEMI) HSP 1 Score: 326 bits (836), Expect = 1.140e-91 Identity = 242/729 (33.20%), Postives = 366/729 (50.21%), Query Frame = 1
Query: 193 DDALKLSTYGVPDELV-----RGVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMVSPAK----VQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSAL-MGAKGGGLERALLEVVVSKTVSTRAGAIRFVSNTFL---AQQIDGDNLARACDSALDFLLKNNFVIVTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPLEGIEP----DWRR 2328
+D L ++G+P ++V RG+ +FPWQ CL D L G+NLVYSAPTS GKT+VAE+L ++ +L+ D + L+++PF+++ EK Y +E++ + + GS G + VNVA+ T+EKAN ++NRL EE L+ + VVVDE+H++ D RG+LLEL+L+K++ +S + +Q+V +SATLPN++ +AKWLDASLY+T+FRPV L+ + + VY + +++ + + +IKK DPD VI L D + + S+L+FC TK+WC++ LA EI SE IK GG +++ + G+ L + L ++ G V ++LR PVGL+ DL+ + GVAFHH+GL ++ER I+E F++ +RVLVATSTL++GVNLPA RVI+RSP+ +D +Y QM GR+GR GV GES+LI +N++ ++ T LP +KS L +G L+RALLEVV V T A ++ T L + +NL C L L ++ F+ + D +A T LGQAC + ++P + + + LDKA + + +ELH LYL+TP E DW R
Sbjct: 3 EDLCHLDSWGLPPQIVDNYKKRGIVSMFPWQVECLTCDG--VLDGQNLVYSAPTSAGKTMVAEILTMQTVLERDKKV-LIILPFVSVVREKMLYFQELFEGTNKRVAGFMGSYT--PTGGLRSVNVAIATIEKANGLINRLMEEDELQDIGCVVVDELHMLGDSNRGYLLELLLTKIKYMSKIRSNISIQIVGMSATLPNLEMLAKWLDASLYQTDFRPVPLKEYLKIGQNVYNVNN-LSL-------------SHIIKPSVEIKK--------DPDHVIYLCVDTILQGYSILIFCFTKKWCES----LALEIASE------------------------------IKRLGGDNKSKV-------------------GIDLRHQ-------------------------LNAKSLG--------------------DVLEQLRRCPVGLETDLSKTISFGVAFHHAGLTMDERDIIEGAFKQNIVRVLVATSTLSSGVNLPARRVIVRSPHCHGFPIDILQYRQMIGRAGRMGVDTA-----------------GESYLICNENERR---MGEEVATHNLPPIKSCLGVGDFSNCLKRALLEVVAGCVVCTTEDAFEYIKCTLLYISTGENFNENLIHQC---LKLLTEHQFI-----RESDNKLAPTNLGQACLA--ASVTPEIGLKLIKELDKARQNFVLDSELHLLYLITPYSVSEQIGHLDWFR 576
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: A0A6J0T9Q8_9SAUR (DNA-directed DNA polymerase n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0T9Q8_9SAUR) HSP 1 Score: 326 bits (835), Expect = 2.140e-91 Identity = 244/751 (32.49%), Postives = 365/751 (48.60%), Query Frame = 1
Query: 196 DALKLSTYGVPDELVR-----GVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMV------------SPAK--VQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAV----DPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAKGGGLE----RALLEVVVSKTVSTRAGAIRFVSNTFLAQQID------GDNLAR----ACDSALDFLLKNNFVIVTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPL--EGIEPDWRRF 2331
D L L+ +G+P ++ GV R+F WQA CL V G+ L G+NLVYSAPTS GKTLVAE+L+L+ +L+ AL ++PFI++A EK+ YL+ ++ + + ++ Y GS R ++VAVCT+E+AN ++NRL EEK L++L VVVDE+H++ D QRG+LLEL+L+K+R + SP VQ+V +SATLPN+ +A WL+A LY+T+FRPV L +V ++Y S IK + + P D D V+ L + ++ SVLVFC +K WC+ A ++A E + + K++S V VVL P + + +LR +P GLD L ++ GVAFHH+GL +ER I+ED FR+G +RVLVATSTL++GVNLPA RVIIR+P G LD Y QMAGR+GR GV GES L+ ++K + L+ L ++S L+G +G L RA+LE++VS + + ++T + G R + ++ + +LL+N F+ ++ K +TQLG A T FS SP+AA++++ L +A S + +LH+LYL+TP+ + + DW +F
Sbjct: 71 DKLLLANWGLPKAVLEKYNGLGVVRMFQWQAECLMV--GQVLEGKNLVYSAPTSAGKTLVAELLMLKRVLETRKK-ALFILPFISVAKEKKYYLQALFQEVGVRVEGYIGSISPAV--RFSALDVAVCTIERANGLINRLIEEKALDSLGTVVVDELHMLGDSQRGYLLELLLTKIRFLTERMKNKQTSTDSPLSSGVQIVGMSATLPNLGLLASWLNAELYQTDFRPVPLVEQVKIGSKIYDDS---------------------------IKVVREMQPVPHMKSDEDHVVSLCYETVQDGHSVLVFCPSKNWCEKLADIIAREFYN-----------------------------------------------LQHKNLSTVAP-----VVLDPPR-------------------------------------------------IEELMSQLRHSPAGLDFVLQRTIKWGVAFHHAGLTFDERDIIEDAFRQGVLRVLVATSTLSSGVNLPARRVIIRTPVFGSRTLDVLTYKQMAGRAGRKGVD-----------------TIGESILLCKPSEKS---KGIALLQGCLKPVRSCLIGHEGEELTSSMIRAILEIIVSGVAGSPDDIQSYTASTLFGAGLKDSFQDCGKEQERTYHGSIEACVQWLLENEFIHLSVSKEGKEVYCATQLGSA--TLFSSFSPVAALEIFADLQRAMKSFVLENDLHSLYLVTPVYEDWTKIDWYQF 666
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: UPI0007637EF3 (DNA polymerase theta n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007637EF3) HSP 1 Score: 326 bits (835), Expect = 2.230e-91 Identity = 238/713 (33.38%), Postives = 353/713 (49.51%), Query Frame = 1
Query: 193 DDALKLSTYGVPDELV-----RGVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRMVSPAK----VQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAVDPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSAL-MGAKGGGLERALLEVVVSKTVSTRAGAIRFVSNTFLAQQIDGDNLARA-CDSALDFLLKNNFVIVTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTP 2298
DD + ++G+PD++V RG+ +FPWQ CL D L GRNLVYSAPTS GKT+VAE+L ++ +L+ D + L+++PF+++ EK Y +E++ + + GS G + VNVA+ T+EKAN I+NRL EE L+ + +VVDE+H++ D RG+LLEL+L+K++ +S K +Q+V +SATLPN++ +AKWLDA+LY T+FRPV L+ + + VY + E +IK DPD + L D + + S+L+FC TK+WC+T LA EI SE IK GG + T + + L+ Q G + V ++LR PVGL+ DL + GVAFHH+GL ++ER I+E F++ +RVL+ATSTL++GVNLPA RVI+RSP+ +D +Y QM GR+GR GV GES+L+ +ND+ ++ T LP +KS L +G L+RALLEVV V A ++ T L +G+NL + L L++N FV + D +A T LGQAC + ++P + + + LD+A + + +ELH LYL+TP
Sbjct: 3 DDLCNIDSWGLPDQIVENYKRRGIVSMFPWQVECLTSDG--VLDGRNLVYSAPTSAGKTMVAELLTMQTVLERDKKV-LIILPFVSVVREKMLYFQELFEGTNKRVAGFMGSYT--PSGGLRSVNVAIATIEKANGIINRLIEEDGLQDVGCIVVDELHMLGDSNRGYLLELLLTKIKYMSKIKSNLSIQIVGMSATLPNLNILAKWLDATLYHTDFRPVPLKEYLKIGKNVYNANNLSLSHXIEPSI--------------EIKN--------DPDNIKYLCIDTILQGYSILIFCFTKKWCET----LALEIASE------------------------------IKRLGGXN----------TSKIGIE--------------------------------------LRNQLNGENL----------------GDVLEQLRRCPVGLETDLNKTISFGVAFHHAGLTMDERDIIEGAFKQNIVRVLIATSTLSSGVNLPARRVIVRSPHCHGFPIDILQYRQMIGRAGRMGVDTA-----------------GESYLLCNENDRR---MGEEIATQNLPPIKSCLGVGDFSSCLKRALLEVVAGCVVCNTEEAFEYIKCTLLYIS-NGENLNETPINECLKLLIENQFV-----RESDNKLAPTNLGQACLA--ASVTPEIGLKLIKELDRARQNFVLDSELHLLYLITP 562
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Match: UPI001454E8E1 (DNA polymerase theta-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454E8E1) HSP 1 Score: 326 bits (835), Expect = 2.470e-91 Identity = 258/777 (33.20%), Postives = 360/777 (46.33%), Query Frame = 1
Query: 196 DALKLSTYGVPDELVR-----GVGRLFPWQAHCLRVDNGKPLSGRNLVYSAPTSGGKTLVAEVLLLRALLQHDGTMALLVVPFIALAMEKRNYLREVWAPLQLNIQAYHGSEGGGDDGRMGGVNVAVCTMEKANSIVNRLAEEKRLEALSAVVVDEMHLIADGQRGFLLELMLSKLRM---------------------VSPAKVQLVCLSATLPNIDSVAKWLDASLYRTEFRPVELRHRVCKARQVYAPSRGIAIGGSEGEAGEEGPGNFVRVVGGDIKKIGQTSPAV----DPDGVIDLVKDALEKDMSVLVFCATKRWCKTAAALLANEIMSEKALAAKTLKNSKAAAEKGSAKAMNASSSIHIKSSGGKDEACLARKFVPTKSVSLVVGEGARGVVLHPETTSQDDTNSTGNTCEARDRARESSTLKRQAFGATVTSSDGQSGSYPMAMAVARVRKRLRETPVGLDADLAHLVEAGVAFHHSGLVVEERSILEDEFRRGTIRVLVATSTLAAGVNLPAHRVIIRSPNIGLAMLDSTRYHQMAGRSGRAGVSRGKEGDGGGSKEGAKKHCWGESFLIIPKNDKMTIPQASKLITAPLPRLKSALMGAK---GGGLERALLEVVVSKTVSTRAGAIRFVSNTFLA-----------QQIDGDNLARACDSALDFLLKNNFVI---VTAEKHHDYGVASTQLGQACATFFSGLSPLAAVDVYRSLDKACDSLFVATELHALYLLTPL--EGIEPDWRRFREEYTGWSENDPSRVV 2379
D L L+++G+PD ++ + +FPWQA CL + GK L G NLVYSAPTS GKTLVAE+L+L+ +++ AL ++PF+++ EK YL+ ++ + + Y GSE G V++A+CT+EKANS+VNRL EEK+L+ L +VVDE+H++ D RG+LLEL+L+K+R VS VQL+ +SATLPN+D +A+W+DA LYRT+FRPV L + + +Y S + K+ +PA D D ++ L + L SVL+FC TK WC+ +A EI A L NSK AS SI++ +D V ++L+ TPVGLD L+ V GVA+HH+GL +ER ILE FR+G +++LVATSTL++GVNLPA RVIIRS +LD Y QMAGR+GR GV GES LI N++ A+KL+ A LP ++S L ++RA+LEV+ S ST + T LA Q D + A A FL + FVI V A TQLG A T S LSP A+ V+ L +A + + +LH LY +TP+ +G +PDW F + S +D RV
Sbjct: 442 DPLLLTSWGLPDPVLAQYHRCNITHMFPWQAECLAL--GKVLDGGNLVYSAPTSAGKTLVAELLILKRVMETKKK-ALFILPFVSVTREKMFYLQTMFQDAGIRVGGYMGSEA--PAGGFKNVDIAICTIEKANSLVNRLMEEKKLDQLGIIVVDELHMVGDTHRGYLLELLLTKVRFMSRKSLGKTTQMENSEGPSSEVSQNAVQLIGMSATLPNLDHLARWMDADLYRTDFRPVPLTQTLKAGKTLYDAS---------------------------LSKLRDLNPAHNIPGDEDQILLLCLETLAIGCSVLIFCPTKNWCEKLCENMAREI----ARLTGRLPNSK----------KEASISINLNMQSLQD-----------------------------------------------------------------------------------VTEQLKRTPVGLDPVLSRTVPCGVAYHHAGLSFDERDILEGAFRQGAVKILVATSTLSSGVNLPARRVIIRSVMFNRRVLDPLVYRQMAGRAGRKGVD-----------------TEGESILICKPNER---DNAAKLMQAVLPPVQSCLKKPGQDLSNSMKRAILEVIASGAASTPEDVSNYAGCTLLAAGLTSDPSVNANQEDKSSTATAIQKCTKFLQEQEFVILQKVPAGDELQEVFRPTQLGSA--TLASALSPDEALVVFSELQRARKNFVLENDLHLLYQVTPIYDQGFQPDWYEFMCTWENLS-SDKRRVA 1066 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5986.13511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5986.13511.1 >prot_H-elongata_contig5986.13511.1 ID=prot_H-elongata_contig5986.13511.1|Name=mRNA_H-elongata_contig5986.13511.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=803bp RFYITRTGQKLTGREAYMTAYEDRQARAASGGENIVDRLTIMKTGQKDNAback to top mRNA from alignment at H-elongata_contig5986:2538..11203+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5986.13511.1 ID=mRNA_H-elongata_contig5986.13511.1|Name=mRNA_H-elongata_contig5986.13511.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8666bp|location=Sequence derived from alignment at H-elongata_contig5986:2538..11203+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5986:2538..11203+ >mRNA_H-elongata_contig5986.13511.1 ID=mRNA_H-elongata_contig5986.13511.1|Name=mRNA_H-elongata_contig5986.13511.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4818bp|location=Sequence derived from alignment at H-elongata_contig5986:2538..11203+ (Himanthalia elongata Himel1 dioecious)back to top |