mRNA_H-elongata_contig596.13474.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 360 bits (924), Expect = 1.000e-113 Identity = 185/334 (55.39%), Postives = 240/334 (71.86%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTGLTEAQIVEVPIPVEN 1323
+ Q S VV+V YP YE FL+ L++VNFN G ILS SCV TNFY RL+ ATIGP+ VLGALA++Y V+ RN HS ++ AK+KHLS+ +F++F++YSSVS+ IFQTFVC+ +D V YLRADY CSTD+H A YAG+M VYP GIPA F WL NR+ + VD A G + + G + ++DLWAPYK +RYY+EVVECGRR+AL GLAVFIYPGS+AQ+A+E +FA F + ++LSPF DPLD WLYRSGAWVI++SM+L LLLKVD +DE+S SQ +FA LLI+AH GM + + +L V L + + PIP++
Sbjct: 74 VTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVD--ANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMR--DQPIPIQG 403
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 335 bits (860), Expect = 3.490e-104 Identity = 183/354 (51.69%), Postives = 236/354 (66.67%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTGLTEAQIVEVPIPVENVSYPTRSAPSGEKIILVLEE 1383
+ Q + VV VEYP YE FLAAL++VNFNLG LS C+ TNFY RL +TI P+A+LG LA + +A N HS MR A +KHLS+ +F++F +YSSVS+TIFQTF+C+ +D EV YLRADY CST +H YAG+M LVYP+GIPA FAWWL NR + R+G + PE + +KDLW PYK +RY+YE+VECGRR+ L GLAVF++PG++AQ+AIE FA VFE+L+PF DP+D WLYRSGA V++ SMYLALLLKVD +DE S SQ VFA +L+AAH M V++ LL EA +V + V+ TRS+ + + EE
Sbjct: 54 VTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDL----VQDRSGGTTTPEN---LRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRSSWRASETLGAEEE 400
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 326 bits (836), Expect = 4.870e-101 Identity = 172/314 (54.78%), Postives = 219/314 (69.75%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLL 1263
+ Q + VV VEYP YE FLAAL++VNFNLG LS CV TNFY RL +T+ P+A+LG LA ++ +A N HS MR A +KHLS+ +F++F YSSVS+TIFQTF+C+ +D EV YLRADY CST +H YAG+M LVYP+GIPA FAWWL NR + R+ + PE + +KDLW PYK +RY+YE+VECGRR+ L GLAVF++PG++AQ+AIE FA VFE+L+PF DP+D LYRSGA V++ SMYLALLLKVD +DE S SQ VFA +L+AAH M V++ LL
Sbjct: 32 VTQFASVVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVR----ERSSGTATPEN---LRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLL 338
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 344 bits (883), Expect = 9.890e-101 Identity = 176/320 (55.00%), Postives = 228/320 (71.25%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTGL 1281
+ Q S VV+V YP YE+FLA L+VVNF+LG +LS+SC+ NFY RL T+GP+ V G LA +Y ++ RN HS M+ AK+KHLS+ +F+ F++YSSVS+ IFQTFVC+ +D V YLRADY CST H A MAYAG+M LVYPVGIP ++WWL NR+ + V T L P R + ++DLW+ YK +RYY+EV+ECGRR+AL GLA F+ P S+AQ+AIE + A +F AV ++LSPF DP D WLYR+GAW+I+ SMYLALLLKVD +DE+S SQ FA +LIAAH GM VV++ +L V GL
Sbjct: 750 VTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNC-LGGAP-RLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGL 1067
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 319 bits (818), Expect = 2.620e-99 Identity = 167/314 (53.18%), Postives = 217/314 (69.11%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLL 1263
+ Q S V++V YP YE FL+ L+VVNFNLG ILS+SC+ +NFY ATI P+ V GA A++Y V+ RN HS M+ AK+KHLS+ +F++F++YSSV + IFQTFVC+ +D+ + YLRADY C T HKA M YAG+M VYPVGIPA +AWWL R+ + V P L+ PE + ++DLWAPYK RYY+EVVECG R+AL GLA F+ P S+AQ AIE + A +F AV ++LSPF DP D WLYR G W+ SMYLAL VD +DE++ SQ VFA +LIAAH GM +V+V+ +L
Sbjct: 39 VTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAP-NNFLERVPE-LDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLAL---VDVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 326 bits (835), Expect = 5.410e-92 Identity = 173/341 (50.73%), Postives = 224/341 (65.69%), Query Frame = 1
Query: 256 QLRGTDSFQFYAFVLCTTILP*LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTG 1278
Q R + A + + + Q S V +EYP AY++FL+ + VVN +LG ILS +CV+ TNFY+RL++ATIGP+ VLG L +Y VA RN H AMR + +HLSV +F++F++Y++VSYTIF+TFVCD +D +YLRADY C T H AY YAG+ LVYPVGIP F WWLF NR+ +K D + L+ DLW PYK YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A +F V EILSPF P++MWLYR+G +V++ SMYLALLL+VD +DE SQ VF+ +++ AH M VVV+ LL +F G
Sbjct: 689 QARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL-IFVG 1018
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 326 bits (835), Expect = 5.480e-92 Identity = 174/341 (51.03%), Postives = 224/341 (65.69%), Query Frame = 1
Query: 256 QLRGTDSFQFYAFVLCTTILP*LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTG 1278
Q R + A + + + Q S V VEYP AY++FL+ + VVN +LG ILS +CV+ TNFY+RL++ATIGP+ VLG L +Y VA RN H AMR + +HLSV +F++F++Y++VSYTIF+TFVCD +D +YLRADY C T H AY YAG+ LVYPVGIP F WWLF NR+ +K D ++ L+ DLW PYK YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A +F V EILSPF P++MWLYR+G +V++ SMYLALLL+VD +DE SQ VF+ +++ AH M VVV LL +F G
Sbjct: 708 QARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL-IFVG 1037
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 309 bits (792), Expect = 2.200e-86 Identity = 166/319 (52.04%), Postives = 215/319 (67.40%), Query Frame = 1
Query: 322 LAQMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYVFTG 1278
+ Q S V VEYP AY++FL+ + VVN +LG ILSL+CV T+FY+RL+L TI P VLG L +Y AM V K++HLSV +F++F++Y++VSYTIF+TFVCD +D +YLR+DY C T++H AY YAG+M LVYPVGIP F WWLF +R+ +K Q ER + DLW PYK YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A++F V E LSPF P++MWLYR+G +V++ SMYLALLL+VD +DE + SQ VF+ +L+ AH M VVV+ LL +F G
Sbjct: 735 VTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELK----------QEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL-IFAG 1031
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 272 bits (696), Expect = 5.180e-75 Identity = 155/345 (44.93%), Postives = 215/345 (62.32%), Query Frame = 1
Query: 250 RGQLRGTDSFQFYAFVLCTTILP*LA-----QMSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGHSTRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAHGGMASVVVIYPLLYV 1269
+G+L +F AF L T + +A Q + YP Y++FL AL+ VN ++G ILS SCV T+F++RL++ATIGP+ VL LA+++ V RN S A+R KNKHLS +F++F +YSSVS+T+FQTFVCD +D V+YLRADY C T + A+ YA +M VYP+GIPA FAW L NR ++ D +R + + DLW YK RYYYE++E RR+ L G+AVF+ PGSSAQ+A+ L AV+F + E LSPFT +DM LYR G V+ S+Y+ALLLKV+ ++E S + + F +LI A+ MA +V+ L V
Sbjct: 693 KGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADR----------DRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLV 1027
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 252 bits (644), Expect = 6.340e-72 Identity = 136/291 (46.74%), Postives = 189/291 (64.95%), Query Frame = 1
Query: 358 PPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIGPIAVLGALAISYRVAVIRNGH--STRAMRVAKNKHLSVVVFLLFILYSSVSYTIFQTFVCDFMDSEVAYLRADYGFECSTDSHKAYMAYAGIMALVYPVGIPAAFAWWLFINRYSIKNVDTPARTGLQSEPERFGAVDAVKDLWAPYKRKRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFTDPLDMWLYRSGAWVIYLSMYLALLLKVDDADEESYSQTVFAWLLIAAH 1224
P YE F+ L+V+NFN+ +LS SC+ T+F++RL+ T+GP+AVLG L ++ +A +RN + S + KHLS+ +F+LF +YSSVS IF TF C+ ++ V+YLRADYGF C + H A+ YAG+M LVYP+GIPA F WWL NR+ +++ L EP K LW YK + +Y+ ++EC RR+AL GL VFI P S+AQ+AI L A F + E+L PF P++ WLY SG+ VI+ SMY ALLLKVD ++E S SQT F+ +LI +H
Sbjct: 7 PDTYEAFVERLNVINFNVRDLLSFSCLVKTDFFDRLLWKTLGPLAVLGVLQATHVIARLRNRNIPSDSVQLTVRRKHLSLAIFILFFVYSSVSRDIFLTFSCETLEDGVSYLRADYGFVCFSRRHVAFRVYAGVMVLVYPLGIPALFGWWLRRNRHDLRSPSRAENADL--EP--------AKALWESYKGETWYFIIIECVRRIALTGLGVFINPNSAAQVAILLLLAFGFLVLSEVLDPFEKPIETWLYLSGSCVIFASMYAALLLKVDVSNENSESQTAFSAVLILSH 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig596.13474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig596.13474.1 >prot_H-elongata_contig596.13474.1 ID=prot_H-elongata_contig596.13474.1|Name=mRNA_H-elongata_contig596.13474.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp MSGVVSVEYPPAYENFLAALSVVNFNLGSILSLSCVFTTNFYERLVLATIback to top mRNA from alignment at H-elongata_contig596:4521..6766+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig596.13474.1 ID=mRNA_H-elongata_contig596.13474.1|Name=mRNA_H-elongata_contig596.13474.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2246bp|location=Sequence derived from alignment at H-elongata_contig596:4521..6766+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig596:4521..6766+ >mRNA_H-elongata_contig596.13474.1 ID=mRNA_H-elongata_contig596.13474.1|Name=mRNA_H-elongata_contig596.13474.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2142bp|location=Sequence derived from alignment at H-elongata_contig596:4521..6766+ (Himanthalia elongata Himel1 dioecious)back to top |