mRNA_H-elongata_contig595.13465.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A6H5KG61_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG61_9PHAE) HSP 1 Score: 644 bits (1660), Expect = 8.270e-223 Identity = 298/419 (71.12%), Postives = 342/419 (81.62%), Query Frame = 3
Query: 27 DWWVIRDNPPPNPWLSNLYSYLWLVWVLCLIAGSVLLLDHDILLYAGFVTVAFLATAVIPDSGDSPAPYFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFWRNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGLERE-DKEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRVLRLRSKYGEDRKWRHGP 1280
DWW +RD PPP+P + L LW WV LIAGS+ LL+ DI +Y GFV FL TAVIPDSGDSP+PYF HLA+PF AVKG+ E G WT I YW+F +P ADFVVGVDTFNKR+ EY+ LR F+ A+WIF+PAQLA LA+ CH VN LT LE GF VS+ VYTGGIGIT+ HELVH+++R+EQWLGRA+CV+ISYGHFYVEHNRGHHKLVAT+ DPATARFGES YAFLPR V GS SAW+LE D+ RDRNLPF+ NEMLWYWVAS+CLC LTA FG T+PLF+ QS IGI FE+VNYVEHYGLER+ D++GK EPVGFEHSWDAPHRLTN++LFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLP+GYPGC+L+AL PPLW +VM+KRVL+LRSK R WRHGP
Sbjct: 27 DWWALRDYPPPDPGTARLCPRLWQAWVAGLIAGSMFLLEFDIWVYVGFVASLFLGTAVIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTAISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPAQLALLAYACHAVNTIPLTPLEFLGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFASAWRLETDRLRDRNLPFYHNEMLWYWVASSCLCALLTAMFGPLTVPLFVGQSLIGIFFFESVNYVEHYGLERKRDEQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGP 445
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A836CE88_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE88_9STRA) HSP 1 Score: 394 bits (1013), Expect = 2.420e-122 Identity = 201/404 (49.75%), Postives = 256/404 (63.37%), Query Frame = 3
Query: 72 SNLYSYLWLVWVLCLIAGSVLLLDHDILLYAGFVTVAFLATAVIPDSGDSPAPYFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFWRNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGLERED-KEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRVLRLRSKYGEDRKWRHGP 1280
+ L S WL W + +I G LL YA FVT AF +A IPD G +P P +AHL +P IA KGL GAW L+YW+FV++PV D +VGVDTFN Y TL F+ T IF ++A L W V +LT E G++VS+GVY GG GI I HEL+HR + E+ LGR + ++ YGHF VEHN GHH+ VAT DPATARFGES ++FLPR V S SA +E + R LP+ NE+ Y V SA + + A FG + +FL QS +GIILFE+VNY+EHYGLER + GK E VG EHSWD+P RL+N+ LFKLQRH DHH+ + +RYQ L A+ +PQLP GYPG +L+A PP W VM+ R+ LR+++ R WR GP
Sbjct: 263 ATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKD-APQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARH-PGRVWRFGP 664
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A3A0DPJ2_9BACT (Alkane 1-monooxygenase n=3 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DPJ2_9BACT) HSP 1 Score: 302 bits (774), Expect = 3.400e-91 Identity = 152/340 (44.71%), Postives = 204/340 (60.00%), Query Frame = 3
Query: 219 SPAPYFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGLERED-KEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
SP PY VP + G G + ++ +F +IP+ D ++G D N D L FGF+ T+++VP Q++ + WG HVV LT E GFA+SIG+ TGG+G+T+ HEL H+ + E+ LG + + +SY HFY+EH GHH VAT DPATAR GESLYAF R+V S + AW++E + + R W N MLW+ L + FG + + F VQS +G L E VNY+EHYGL+R + G+ E V H+W+A R+TN LFKLQRH DHHV+ RRYQTLR SPQLP GYPG +L+AL PPLW +M+ R+
Sbjct: 37 SPWPYSLAYVVPLSVILGHWLGGVFYYLTPMITFGLIPLLDLMIGSDRTNLDADALERLSEKFGFRVITFLYVPLQISLVIWGAHVVTHEALTGFELAGFALSIGITTGGVGVTVAHELFHKKNAFEKALGHVLLMTVSYMHFYIEHLIGHHVHVATPRDPATARRGESLYAFYVRTVSRSWLDAWRIEKQRLQHRGYSHWGYHNRMLWFVALPVMFAAMLGSLFGWQAVFYFFVQSAVGFTLLEIVNYLEHYGLQRRELASGRYEKVNLAHAWNADQRVTNYFLFKLQRHADHHVHPLRRYQTLRHF-EESPQLPTGYPGMMLLALAPPLWRRIMHPRL 375
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A7Y7BGN3_9BACT (Alkane 1-monooxygenase n=2 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BGN3_9BACT) HSP 1 Score: 289 bits (739), Expect = 1.740e-86 Identity = 141/343 (41.11%), Postives = 203/343 (59.18%), Query Frame = 3
Query: 231 YFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFWR--NEMLWYWVASACLCGALTATFGL-------KTIPLFLVQSFIGIILFETVNYVEHYGLERED-KEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
+ +P + + G G W ++ + + F++IP+AD+++G D N EDE + F ++ T+I+ Q+AFL WG ++ LT E GF VS + TGGIGIT+ HEL H+ +LE++ + + + + Y HFY+EHNRGHH VAT DPAT+R E+ F RSV+GS SAW+LE ++ R R L W N+M+W+ + LCG LT L + I F QS + L E VNY+EHYG+ R++ G+ E V HSW++ HRL+N LF+LQRH DHH N+ +RYQ L+ SPQLP GYP +++A PPLW MN ++
Sbjct: 9 FLTAFVIPSLTILGFYLGGYWNYLTILFVFIIIPLADYLIGEDPENLSEDESMLIAEQFYYRFITFIWAFFQVAFLIWGVWMIATVPLTVTEWIGFVVSFALVTGGIGITVAHELGHKKSKLERFYAKLLLMTVCYMHFYIEHNRGHHVYVATPRDPATSRKNEAFPKFWVRSVFGSYFSAWRLEKERLRKRKLGIWSFDNQMIWFSLLPIVLCGVLTTGMSLIVGAFTWQVIAFFFAQSILAFTLLELVNYIEHYGIVRKEVAPGRYERVNPMHSWNSNHRLSNFFLFQLQRHSDHHANAIKRYQVLKHY-DESPQLPSGYPAMIMLAAIPPLWFKWMNPKL 350
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A1I2BKE7_9BACT (Alkane 1-monooxygenase n=1 Tax=Thermoflexibacter ruber TaxID=1003 RepID=A0A1I2BKE7_9BACT) HSP 1 Score: 287 bits (734), Expect = 8.710e-86 Identity = 143/343 (41.69%), Postives = 209/343 (60.93%), Query Frame = 3
Query: 231 YFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASACLCGALTATFGLKT------IPLFL-VQSFIGIILFETVNYVEHYGLERED-KEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
+F+ +P + + G GAW F + + FV+IP+ D +VG D N + + F ++ +++V QLAFLAWGC+V+ ++T+LE GF + + TGGIGIT+ HEL H+ +LE++ + + + Y HFY+EHNRGHH V T DPAT+R GE+ YAF R+V S +SAW+LE ++ + L + +N+M+W+ + LC LTA F L IP+F +QS +G L E VNY+EHYG+ R++ K E V HSW+A ++N LF+LQRH DHH + +RYQ L+ SPQLP GYP +L+AL PPLW VM+K++
Sbjct: 9 FFSAFIIPALVIAGYYLGGAWNFSTVVFVFVLIPIIDQIVGKDAENVEDRVVSQVAEEFYYRFILYVWVYVQLAFLAWGCYVIAQQNMTSLEYIGFILGFPLVTGGIGITVAHELGHKKSKLERFYAKVLLMTTCYMHFYIEHNRGHHVHVGTPKDPATSRRGENFYAFWVRTVRDSYLSAWRLEFERMSRKGLSKFSLQNDMIWFTLLPILLCAVLTAVFSLPKGVILWDIPIFFFIQSILGFSLLEAVNYIEHYGIVRKEIAPNKYEKVNTLHSWNANQLISNFFLFQLQRHSDHHAFAHKRYQVLK-HVEESPQLPAGYPSMILLALVPPLWFKVMDKKL 350
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: UPI001A095F64 (Alkane 1-monooxygenase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI001A095F64) HSP 1 Score: 287 bits (735), Expect = 1.030e-85 Identity = 148/341 (43.40%), Postives = 204/341 (59.82%), Query Frame = 3
Query: 216 DSPAPYFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGLEREDK-EGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
+SP P+ VP +AV G + G + F + + FV++P+ D ++G T+N +DE L + F W VP L + WG ++ L+ +E G SIG+ TGGIGI + HEL+H+ R E+ +G+ + + +SY HFY+EH GHH+ V+T DPA+AR GESLY F RSV+GS SAW++E + + + L W N MLW+ + A LT FG + F+ QS + L E VNYVEHYGLER+ +G E V HSW+A LTN LLF LQRH DHH + +RRYQ LR + +SPQLP GY G +L+A PPLW +M+ RV
Sbjct: 9 NSPLPFLITYTVPLLAVWGFIQGGWFNFAVPVYIFVLVPLLDALLGTYTYNPTQDETSRLTANKSFSLIAWPHVPLLLGLVIWGAWALSHLPLSTVEIIGLTCSIGLCTGGIGINLAHELIHKPTRHERLMGQILLLNVSYMHFYIEHLFGHHRNVSTPEDPASARLGESLYRFYFRSVFGSYRSAWQIESKRLQKKGLGLWSHHNRMLWFALWPALYATGLTVFFGPAALGFFIAQSIVAFSLLEGVNYVEHYGLERKKTPQGYYEKVDVVHSWNANQILTNALLFNLQRHSDHHAHQSRRYQILR-QFEQSPQLPTGYAGMLLLATLPPLWRYIMDSRV 348
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A7L9BEX5_9BACT (Alkane 1-monooxygenase n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BEX5_9BACT) HSP 1 Score: 286 bits (731), Expect = 2.530e-85 Identity = 144/344 (41.86%), Postives = 208/344 (60.47%), Query Frame = 3
Query: 231 YFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTAL-ECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASA--CLCGALTATFGLKTIPL-----FLVQSFIGIILFETVNYVEHYGLERED-KEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
+F +P + + G G W ++ + ++F++IPV D G+DT N + + F ++ T+++ QLAF+ WG + V + + L E GF +S + TGGIGIT+ HEL H+ RLE++ + + + + Y HFY+EHN+GHH LVAT HDPATAR E+ YAF RSV+ AW+LE+ + +NLP +N+M+W+ + CL L A++ LK + F QS + L E VNYVEHYG+ER++ G+ E V HSW+A H ++N LF+LQRH DHH N+ +RYQ L SPQLP GYP +L+AL PPLW S+MNKR+
Sbjct: 7 FFTAFIIPALVIAGFYLDGYWNYLAIVFAFIIIPVIDQASGLDTTNVEPQRVKVVSEEFFYRFVTYLWTFIQLAFILWGFYAVTSGKINTLPEWIGFTISFALVTGGIGITVAHELGHKKSRLERFYSKLLLMTVCYMHFYIEHNQGHHVLVATPHDPATARKNENFYAFWFRSVFLGYAHAWQLELARLNRKNLPVLHPKNQMIWFALLPVLFCLVFTLLASYLLKRPAIELPAFFFAQSILAFTLLELVNYVEHYGIERKEIAPGRYERVNPLHSWNASHLISNFFLFQLQRHSDHHANAIKRYQVLNHY-DESPQLPFGYPTMILIALLPPLWFSMMNKRL 349
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: UPI00191F6AFD (alkane 1-monooxygenase n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191F6AFD) HSP 1 Score: 285 bits (728), Expect = 9.440e-85 Identity = 146/351 (41.60%), Postives = 201/351 (57.26%), Query Frame = 3
Query: 231 YFAHLAVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADL-TALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASACLCGALTATFGLKT------IP-LFLVQSFIGIILFETVNYVEHYGL-EREDKEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRVLRLRSKY 1250
+F +P + V G W F+ + +SF+++P D ++G DT N E + + F ++ T+++ Q+AFL WG + V + + TA+E GF +S + TGGIGIT+ HEL H+ LE++ G+ + + + YGHFY+EHNRGHH VAT DPATAR E Y F RSV+ AW LE + + W +NEMLW+ V CG LT F + +P F QSF L E VNYVEHYG+ RE GK E V HSW+A H ++N LF+LQRH DHH + +RYQ L SPQLP GYP +++AL PP+W S+MNKR+ R +
Sbjct: 10 FFTAFIIPALTVWGFYLGNLWNFLPIVFSFLLLPFIDQLLGTDTSNVPETNAKVVGEEFYYRFVTYVWTYFQVAFLVWGAYAVTSGKIDTAVEGIGFVISFSLVTGGIGITVAHELGHKKSALERFYGKLLLITVCYGHFYIEHNRGHHVAVATPADPATARKDEPFYHFWVRSVFKGYAHAWNLEKESLHRKQHSTWSVKNEMLWFAVLPVVFCGVLTFAFSYRAGHFVWQVPAFFFAQSFFAFTLLELVNYVEHYGIVRREIAPGKYERVNPLHSWNASHLISNFFLFQLQRHSDHHAYAHKRYQVLNHY-DESPQLPFGYPTMIILALFPPVWFSLMNKRLAAWREDH 359
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A5C7QZJ2_9BURK (Alkane 1-monooxygenase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7QZJ2_9BURK) HSP 1 Score: 284 bits (727), Expect = 9.970e-85 Identity = 155/337 (45.99%), Postives = 203/337 (60.24%), Query Frame = 3
Query: 246 AVPFIAVKGLQERGAWTFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRN--LPFWRNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGLER-EDKEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRVLRLRSK 1247
AVP + L + +T L+ ++P+AD V+G D N E+ + HS + + +VP QLA +AWG V L+ + G +S+G+ TGG GITI HEL H +E+ L + + V +SYGHF++EHNRGHH VAT DPATAR GE LY FLPR++ GSL SAW+LE + R R + NEMLW+ A+ L L A +G + F QS + I+L E VNYVEHYGL R ++ G E VG HSW+A RL+N LL LQRH DHH N +R Y L SPQLPMGYPG +L+AL PPLW VM+ RV +L+S+
Sbjct: 17 AVPLPVIGWLLGQNWFTVALVVG---VLPLADAVMGKDFGNPAEEPHPASDHSNLLRWNLYAYVPVQLAMIAWGAAVFAGGSLSDGQALGLLLSVGLVTGGQGITIAHELGHGRSAMERRLAQLLLVSVSYGHFHIEHNRGHHARVATRDDPATARLGEPLYCFLPRAIVGSLASAWQLEAARLRRRGEAVISHHNEMLWFAAATLLLAAGLGACWGAGALVFFAGQSLVAILLLEAVNYVEHYGLVRGRERNGVLERVGARHSWNASQRLSNALLINLQRHADHHANPSRPYHLL-CHREDSPQLPMGYPGMLLLALVPPLWFRVMDPRVQQLQSR 349
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Match: A0A3A4JVY7_9DELT (Alkane 1-monooxygenase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JVY7_9DELT) HSP 1 Score: 285 bits (728), Expect = 1.800e-84 Identity = 149/336 (44.35%), Postives = 202/336 (60.12%), Query Frame = 3
Query: 234 FAHLAVPFIAVKGLQERGAW-TFILLYWSFVMIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHVVNAADLTALECFGFAVSIGVYTGGIGITIGHELVHRAHRLEQWLGRAVCVIISYGHFYVEHNRGHHKLVATEHDPATARFGESLYAFLPRSVWGSLVSAWKLEIDKCRDRNLPFW--RNEMLWYWVASACLCGALTATFGLKTIPLFLVQSFIGIILFETVNYVEHYGL-EREDKEGKPEPVGFEHSWDAPHRLTNILLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPMGYPGCVLMALCPPLWMSVMNKRV 1229
F + + +A G W TF+ ++ +FV++P+ DFV+G +T N +E TL + FK TWI P Q+A + WG V +L+ +E G VS+G+ G +GI + HEL+HR E +LG+A+ +SY H+ +EH GHH+ VAT DPATAR+GES+YAFLPR++ S +SAW +E + + + L + N +L Y A+A L L +G + FLVQS + I L E VNY+EHYGL R + + E V HSW+A RLTN LF LQRH DHH + RYQ LR SPQLP GY G VL+ L PPLW +VMNKRV
Sbjct: 38 FTLIFLTVLATLAGYALGGWLTFLTVFIAFVVVPLFDFVLGANTLNPTPEEEATLDEARDFKLLTWIAAPVQVALMFWGAWVAGTKNLSWVETAGLTVSVGIVGGAMGINVSHELIHRYRPFETFLGKAMLWSVSYLHWSIEHVAGHHRRVATPQDPATARYGESVYAFLPRTIIDSFISAWTIERHRLKKKGLAEYGFHNRILRYLAATAALAVGLGLLWGAAAVAFFLVQSLVAITLLEIVNYIEHYGLLRRRVSDTEFEEVTPVHSWNASQRLTNYFLFNLQRHSDHHARAHIRYQLLR-HLDESPQLPTGYAGMVLLTLVPPLWFAVMNKRV 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig595.13465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig595.13465.1 >prot_H-elongata_contig595.13465.1 ID=prot_H-elongata_contig595.13465.1|Name=mRNA_H-elongata_contig595.13465.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=322bp MIPVADFVVGVDTFNKREDEYRTLRHSFGFKSATWIFVPAQLAFLAWGCHback to top mRNA from alignment at H-elongata_contig595:13275..20125- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig595.13465.1 ID=mRNA_H-elongata_contig595.13465.1|Name=mRNA_H-elongata_contig595.13465.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6851bp|location=Sequence derived from alignment at H-elongata_contig595:13275..20125- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig595:13275..20125- >mRNA_H-elongata_contig595.13465.1 ID=mRNA_H-elongata_contig595.13465.1|Name=mRNA_H-elongata_contig595.13465.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1932bp|location=Sequence derived from alignment at H-elongata_contig595:13275..20125- (Himanthalia elongata Himel1 dioecious)back to top |