mRNA_H-elongata_contig5937.13448.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5937.13448.1
Unique NamemRNA_H-elongata_contig5937.13448.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 5.440e-42
Identity = 151/428 (35.28%), Postives = 202/428 (47.20%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALI--GADETVQRSFDLASESVETAASSAGAK------FLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYFGTVDLQRAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-RGLVDEGSRDL------------RPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSS--HIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVL----ELVGGHPGTLVSLSSHLREFSLIDDFR------SHREAFRDRSSLRFCEQRAG 1184
            HVV V     + D  AR+F+N FY AL   G   TV+++FD+A   V   A+  GA       FLLLP   NH+V+IFD+LP G  VD +  LPP      A   Y G   +Q  V ++ +  A  +++ G+PG GKT  A + C+YVR R  F+      C +  +D    +L             P   +G     E LCR IG AIG+P   P++   LH F+  +  T   +   KVLL LD+ DSL   RG +A+D LV L   L       H+ +L T E + L    +  H    +V               EV+PL    A+ LLI   PRD    + EELG+  G  S A   S   NHPVL    E+ GGHPGTLV L+  L    L D  +      S R  FRD+S  R   +R+G
Sbjct:  157 HVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVN--ATHLGAPKHEEDLFLLLPRDGNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPN--TDSGQPSQKVLLVLDNVDSLL-ERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSE-YKLLSGNEVFHGGTERV--------------AEVEPLETRHASELLIDNSPRD---LQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRRSG 561          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.560e-40
Identity = 129/378 (34.13%), Postives = 187/378 (49.47%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIG--ADETVQRSFDLASESVETA---ASSAGAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYFGTVDLQRAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEEL--GVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLID 1115
            HVV V  +  + D+ A+ F+ +FY AL+      TVQ++FD+A  +V      A   G  FLLLP+G NH+V+IFD+LP G+FVD +   P         P Y G  +LQ+ VEM+ +P    +++ GE G GK+ RA + C+YVR R  FD ++    +  +         T     +   +  CRLIG AIGM    P+S   L  FL +           KVLL LDD DSLF + G +ARD ++ L   L   S H+ +L T EQ  L R T      G +             +  +V+PL + DAA+LL+   P     F  +EL   +    +  D    +  H VL+   GHPGTL+ L+  L + ++ D
Sbjct:  160 HVVAVKREESVTDQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNAHPPYARPQGDHFLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAM--------ATAINSSVWFYDDPCRLIGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGG-DARDRVLKLLSNLCSMSEHLKLLVTSEQS-LQRDTNERFRHGSE-------------RVAKVRPLNDRDAAQLLLDKVPTK---FTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVND 511          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.420e-35
Identity = 143/428 (33.41%), Postives = 192/428 (44.86%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADETVQRSFDLASESVETAASSAGAK---FLLLPNGANHEVKIF-----DSLPVGNF--------------------VDLSPSLPPVVNKFVARPEYFGTVDLQRAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-RGLVDEGSRDL-----RPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSS--HIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVLE----LVGGHPGTLVSLSSHLREFSLIDDFRSHREAFRDRSSLR 1163
            HVV V     + D  AR+F+  FY ALI  + TV+R+FD A   +         +   FLLLP G   E K F     + L +G F                    VD +  +PP      A   Y G V +Q  V ++ +P    +++ GEPG GKT  A + C+YVR+R  FD      C +  +D            P   +G    +E LCRLIG AIGMP   P++   LH F+  +  T   +   KVLL LD+ DSLF  R  +A+D LV L   L       H+ +L T E + L R           V                VKPL  + A+ LL+   PRD    + EELG+  G  S AD  S + NHPVL+    + GGHPGTLV L+  L   SL D  +    A + R+S R
Sbjct:  122 HVVAVKHNSGVTDGAAREFATVFYDALIKHEVTVKRAFDTALICINAHRCPPKHEEDLFLLLPKG---EEKSFGCCTAERLRLGRFQHAPFQEDQPFVVEHVGGKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLF-ERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSE-YKLLRGNGYFRGGSEMV--------------ATVKPLKMQHASELLMDNSPRD---LQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFR 527          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: W7U5S9_9STRA (Sh2 domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5S9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 8.840e-35
Identity = 180/740 (24.32%), Postives = 294/740 (39.73%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADETVQRSFDLASESV--ETAASSAGAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYF--GTVDLQRAVEMMG--NPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLIDDFRSHREAFRDRSSL------RFCEQRAG------------------------------------EIAV-------KHGIRSEQCKGVWVKAAKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHLYEV----------------QTGNNINNEPSPGIIYSRLS--------VYGVTSGQERMSSTMRPRCMGPEDLNFVQS--ILRSTEKQQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRG-----------------NVEHCLVNVIQGGA----WEYNTQVYPKLQDLVKACSSLQNVY 1916
            HVV +    ++ D+ A  F+  FY + I    TV+++F++AS +   ET  SS   +FLLLP    H++ +FD   +G FVD SP  PPV N     P  F    V  Q  + ++   +   R I++ G PG+GKTA A KVC+Y+ +R +FD I++V            LR      + K  E LC++IG+AIG    E  S      FL+     SG     +V++ LD  D  F++R     +SLV +   L  R   + +L T E   L   +  + ++  KV                + PL +   A +L ++ P    GF  EE+     ++  +  + +   PV+  + GHP  +V  +  L +  L D +   ++ + D S +         E+ +G                                     +A+       +  +R    + +W++  +Q           G  WY     D L  +L + L +                  T  N   E S       +S          G T        T+R   + P D+ F++   ++R+ E             +++ I  F  F E W      I+ +  EW    P  +HGF+SR+E E  L G K GTFL RFS ++ G +S+S+  +                  ++ H LV V +        E     +  L+DL+ + +SL   Y
Sbjct:  198 HVVAMKWDAKVSDRAACIFAEFFYLS-IAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESP--PPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMV-----------PLRRKEYRSYEK--ETLCKVIGAAIGF---EDASNEREIVFLLQDKHPSG-----RVIMVLDGPDR-FFNRS----NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKV--------------VHLGPLSDVATAHMLANIAPP---GFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAKQCYVDASQVVEVDTPSMGEEESGIGXXXXXXXXXXXXXXXXXSRISSAENGRDEKRELDALALARETEEARQFLREPTSQRLWLEVVRQGGARQSSSMHQGVPWYRLT--DALQEELRKALIDALRLSRFHIEDFCATHCSTNGNGGAEGSKAFSPPAVSETKQDSKVADGATISIADKDGTIRG--LEPGDIQFIKDRLVIRTPES------------DLVRITDFAVFCEGWVPAQNSIALLCREWLCNKPRLLHGFLSRKETEALLQGYKEGTFLFRFSTSHLGLLSLSFVGKSRKNYPNDEEGEKKAKALHIRHFLVQVEEDRRCVVFMEPGRSRHASLEDLIMSSASLLEFY 875          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.090e-33
Identity = 118/324 (36.42%), Postives = 155/324 (47.84%), Query Frame = 3
Query:  186 GANHEVKIFDSLPVGNFVDLS--PSLPPVVNKFVARPEYFGTVDLQRAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-----RGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKL--FRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVL----ELVGGHPGTLVSLSSHLREFSLID 1115
            G NH+V+IF++LP G  VD +  P+  P   K V  P Y G   LQ+ V ++ +  A  ++I GEPG GKT RA + C+YVR+R RFD      C         D+        P        E  CRLIG AIGMP   PTS   LH F+ N+  T   +   KVLL LD+ DSL    G +A+D LV L   L       H+ +L T E   L    +    T    R               V+PL    A+ LL+   PR+    +  ELG+  G  S+AD  + + NHPVL    E+  GHPGTLV L+  L + SL D
Sbjct:  111 GGNHDVRIFETLPEGQLVDETHPPTPRPPCKKAV--PSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDG-DAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLLSGHERFRGGTETVAR---------------VEPLETRHASELLMDNLPRN---LELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDD 413          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: K8YZD6_NANGC (Sh2 domain containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZD6_NANGC)

HSP 1 Score: 122 bits (307), Expect = 5.530e-26
Identity = 111/377 (29.44%), Postives = 175/377 (46.42%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADETVQRSFDLASESV--ETAASSAGAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYF--GTVDLQRAVEMMG--NPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLID 1115
            HVV +    ++ D+ A  F+  FY + I    TV+++F++AS +   ET  SS   +FLLLP    H++ +FD   +G FVD SP  PPV N     P  F    V  Q  + ++   +   R I++ G PG+GKTA A KVC+Y+ +R +FD I++V            LR      + K  E LC++IG+AIG    E  S      FL+     SG     +V++ LD  D  F++R     +SLV +   L  R   + +L T E   L   +  + ++  KV                + PL +   A +L ++ P    GF  EE+     ++  +  + +   PV+  + GHP  +V  +  L +  L D
Sbjct:   56 HVVAMKWDAKVSDRAACIFAEFFYLS-IAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESP--PPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMV-----------PLRRKEYRSYEK--ETLCKVIGAAIGF---EDASNEREIVFLLQDKHPSG-----RVIMVLDGPDR-FFNRS----NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKV--------------VHLGPLSDVATAHMLANIAPP---GFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLED 386          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.490e-21
Identity = 114/383 (29.77%), Postives = 158/383 (41.25%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADE--TVQRSFDLASESVETAASSA---GAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYFGTVDLQRAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFE-ELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLIDDFRSHR 1133
            HVV V  +  + D+ A+ F+ +FY AL+      TV+++FD+A  +V      A   G  FLLLP+G NH+V+IFD+LP G FVD +   P       ARP                                                        RC           RP P    L+ ++     IG AIGM    P S   L  FL +           KVLL L+D DSLF + G +ARD ++ L   L  +  H+ +L T EQ  L R T      G +             +  +VKPL + DAA+LLI+  P   R  K E  L +    +  D    +  HPVL+   GHPGTL+ L+  L + ++ D    HR
Sbjct:  103 HVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNAHPPHARPQGDHFLLLPHGGNHDVRIFDTLPEGRFVDETREPP-------ARP--------------------------------------------------------RC----------ARPVPFYQGLEELQ-----IGLAIGMTQPGPNSEEELVRFLFDRPTVQEGRTCQKVLLVLEDVDSLFEAGG-DARDRVLKLLSNLCSKGEHLKLLVTSEQR-LQRDTNERFRHGSE-------------RVAKVKPLKDRDAAQLLINKVPT--RFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLHR 390          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.560e-19
Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 3
Query: 1455 STMRPRCMGPEDLNFVQSILRSTE----------KQQWEGRS-----------------------SNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGN------------------------VEHCLVNVIQGGAW-----EYNTQV-YPKLQDLVKACSSLQNVYSD 1922
            +T + R M  E+L FV+ +L++ +          +QQ   R                         N + N+IS+EAF  F  WW      +S +  +WAST P ++HGF+SR  AER+LL ++ GTFL+RFS + PG++ +S+                             V+HCLV V +GG W     E  ++V YP L DLV ACSS++ +Y D
Sbjct:   47 NTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADAAFGRDGGNGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGG-WCYIEVEQGSKVPYPSLHDLVLACSSMEVLYPD 264          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A485LBF9_9STRA (Aste57867_18877 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBF9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.000e-17
Identity = 165/687 (24.02%), Postives = 260/687 (37.85%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADETVQRSFDLASESVE--TAASSAGAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYFGTVDLQ-RAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVA--LHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEAR-DSLVDLFDKLFRRSSHIWILQTVEQ-----HPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHP-----VLELVGGH--------------PGTLVSLSSHLREFSLIDDFR------SHREAFRDRSSLRFCEQRAGEIAVKH-------------GIRSEQ--------CKGVWVKAAKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHL---------------YEVQTGNNINNEPSPG-------IIYSRLSVYGVTSGQE---------RMSSTMRP---RCMGPEDLNFVQSILRSTEKQQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISY 1787
            HVVVV  + ++LD+ A +FS  FY AL+ A  +V +SF++     +  T A    + F LL NG +    +F  +P G + DL+P LP  +N+  A  E F    ++  AV       AR+ SI G+ G+GKT  A + C+Y  DR  F+ IF +R           +R  P A  L    YL   +    G+ A +    +   + D L    +    + +   LL LD  + LF      A+      +  +L RR   + +L T        H LD    C    G +V   +P           ++ L   DAA L     PR     +  E+G    S S       +  HP     V +L+  H              P  +  L    ++    DD+          +  R   SL   ++    + +               G+R +            + +   K SA GA G+ +      E +QL  + R++E  L               Y+  T +N +     G       ++ S  S+     GQ+         R ++  RP   RCM     +F+ S  R        G S N H  ++ +  F  FW W+      I+     W    P  +HGF+S+E  +  L     GTF++RFS T    + + Y
Sbjct:  146 HVVVVPKEDKVLDQKAMEFSKAFYTALL-AGHSVLKSFEIGQVQADIVTVADRHNSHFKLLGNGDHATSHLFSDIPPGRYDDLTPPLP--INECDAVAEVFVGRSIEVHAVYTALAEGARMASITGDAGMGKTEIALQSCQYATDRHLFEHIFFLR-----------VRARPPAASLA--SYLLAQLAKTFGVDASDDVDSLCERIRDKLDGLKIA---DKRLSFLLVLDGCNLLFTPHTMRAQLPQFQAILSQLLRRVRSLSLLLTSTTRLGGGHGLD----C--GVGERV---IP-----------IERLPPWDAALLFTVRAPRR---LQVHEMGGGLESFSRGKIMDALGGHPKIICAVAQLLESHDLERDQHEFLHYLIPSVIAGLDPTSKQHFAGDDYCPLLPLIGPTKMTRPEGSLHHVQKSNSSLDLHVATQPAPPPPPSVVGLRIDLPPPHPPSLVSSMSLAVEKTSAAGAGGMST------EQLQLYAIKRRVESVLPTADGRSIWAHAVVEYDKTTTHNGSRHSGSGFDPQQIHLVASLASIPFEFIGQQISRYFATKVRQAAVDRPLSKRCM-----DFLSSSNRIWGPY---GHSPNAHRGMVDLPMFTAFWTWFAPLLDCITTSQL-WGFKHPRLLHGFISKEACQNMLGACVAGTFVLRFSETRASCLVLVY 775          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: W4HDL0_9STRA (SH2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDL0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.960e-17
Identity = 143/647 (22.10%), Postives = 242/647 (37.40%), Query Frame = 3
Query:    3 HVVVVSVKGQLLDKVARDFSNKFYPALIGADETVQRSFDLASESVETAASSAGAKFLLLPNGANHEVKIFDSLPVGNFVDLSPSLPPVVNKFVARPEYFGTVDLQ-RAVEMMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVD-LFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLIDD------------FRSHREAFRDRSSLRFCEQRAGEIAVKHG-----IRSEQCKGVWVKA--------------AKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHL---------------YEVQTGNNINNEPSPGIIYSRLSVYGVTSGQERMSSTMRPRCMGPEDLNFVQSILRSTEKQQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRG 1799
            HVVVV  + ++LD+ A +FS  FY AL+ A  +V +SF++          +  +KF LL  G +    +F  LP G + DL+P LP  VN+  A  E F    L+  AV       AR++S++G+ G+GKT  A + C+Y  DR  F+++F +R           L   P A +L    Y+   +    G+  +                    D+ +   LL LD  + L  +    ++ S +  +  +L RR   + +L T     L          G ++   +P           ++PL   DAA L     PR     +  E+G   G       S      +++ +GGHP T+ +++  L    L  D                  A +   S  +C      ++ K        R+   K V V A              +  S   + GL        + +QL  + RQ+E  +               +   T ++++      +        G    +   S   +   + P     ++ +  S       G S N    ++ ++ F  FW W++     I +    W    P  +HGF+S+      L     GTFL+RFS T    + + +   G
Sbjct:  152 HVVVVPKEDKVLDQKAMEFSKAFYTALL-AGHSVLKSFEIGQVQANIVTDTHQSKFKLLGCGNHAASHLFSDLPPGPYEDLTPPLP--VNECDAVAEAFIGRSLEVHAVFTALAEGARMVSLVGDAGMGKTEVALQACQYATDRHLFERVFFLR-----------LSAVPPAPNLTR--YVLTRLAKCFGLLVQGNDLDGLCEHIRDQLDALKADK-RLTFLLVLDGCNYLLTNPNERSQLSTIQAILSQLLRRVRSLSLLVTSTTR-LGGGAGLDCGVGERI---IP-----------IEPLPPWDAALLFTLRAPRR---LQVHEMG---GGLAPFAQSQ-----IMDALGGHPKTICAVAQLLENHDLSRDEGEFLHYLIPAVIAGLDPASKQHFSTDYCPLLPYTVSSKKEPPSDMSRTHDDKLVPVAALPIACPPPPLHQXXSSSSTPASDGLSP------QQLQLFAIKRQVEGSIASSEGCMIWAHAVVEFNKSTASSVDVCQVAALTSVPFEFIGQQVSRYFASKIRQDAVLRPLSTRCMEFLSSSDRIWGRAGVSPNTRRGLVDLDMFGAFWTWFQPLLSCI-KTSQLWGFKHPRLLHGFISKSSCVNMLSPCVPGTFLLRFSETKASCVVVVFVTSG 748          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNY6_ECTSI5.440e-4235.28SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KH01_9PHAE2.560e-4034.13CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KC67_9PHAE4.420e-3533.41SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
W7U5S9_9STRA8.840e-3524.32Sh2 domain containing protein n=2 Tax=Monodopsidac... [more]
D7FNY4_ECTSI1.090e-3336.42SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
K8YZD6_NANGC5.530e-2629.44Sh2 domain containing protein (Fragment) n=1 Tax=N... [more]
D7FNX8_ECTSI1.490e-2129.77SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KJ41_9PHAE1.560e-1931.96SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A485LBF9_9STRA3.000e-1724.02Aste57867_18877 protein n=1 Tax=Aphanomyces stella... [more]
W4HDL0_9STRA4.960e-1722.10SH2 domain-containing protein n=2 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5937contigH-elongata_contig5937:2..9484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.1
Seed ortholog evalue2.4e-29
Seed eggNOG ortholog2880.D7FNY4
GOsGO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0023052,GO:0030154,GO:0030587,GO:0031149,GO:0031150,GO:0031154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032501,GO:0032502,GO:0035556,GO:0042802,GO:0042803,GO:0043157,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046983,GO:0047484,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051703,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0080134,GO:0090702,GO:0097159,GO:0097696,GO:0099120,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.STAT cascade
EggNOG OGsKOG3667@1,KOG3667@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons10
Model size4268
Cds size1608
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5937.13448.1prot_H-elongata_contig5937.13448.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5937 2333..7817 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930962.40811-UTR-H-elongata_contig5937:1..23321622930962.40811-UTR-H-elongata_contig5937:1..2332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 2..2332 -
1691679641.9589581-UTR-H-elongata_contig5937:1..23321691679641.9589581-UTR-H-elongata_contig5937:1..2332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 2..2332 -
1622930962.5627534-UTR-H-elongata_contig5937:7817..78291622930962.5627534-UTR-H-elongata_contig5937:7817..7829Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 7818..7829 -
1691679642.026354-UTR-H-elongata_contig5937:7817..78291691679642.026354-UTR-H-elongata_contig5937:7817..7829Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 7818..7829 -
1622930962.577875-UTR-H-elongata_contig5937:8288..84191622930962.577875-UTR-H-elongata_contig5937:8288..8419Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 8289..8419 -
1691679642.0338748-UTR-H-elongata_contig5937:8288..84191691679642.0338748-UTR-H-elongata_contig5937:8288..8419Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 8289..8419 -
1622930962.5949378-UTR-H-elongata_contig5937:8830..89771622930962.5949378-UTR-H-elongata_contig5937:8830..8977Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 8831..8977 -
1691679642.0414052-UTR-H-elongata_contig5937:8830..89771691679642.0414052-UTR-H-elongata_contig5937:8830..8977Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 8831..8977 -
1622930962.616304-UTR-H-elongata_contig5937:9445..94841622930962.616304-UTR-H-elongata_contig5937:9445..9484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 9446..9484 -
1691679642.0488489-UTR-H-elongata_contig5937:9445..94841691679642.0488489-UTR-H-elongata_contig5937:9445..9484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5937 9446..9484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930962.4243543-CDS-H-elongata_contig5937:2332..24761622930962.4243543-CDS-H-elongata_contig5937:2332..2476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 2333..2476 -
1691679641.969723-CDS-H-elongata_contig5937:2332..24761691679641.969723-CDS-H-elongata_contig5937:2332..2476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 2333..2476 -
1622930962.437241-CDS-H-elongata_contig5937:2849..35231622930962.437241-CDS-H-elongata_contig5937:2849..3523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 2850..3523 -
1691679641.9783382-CDS-H-elongata_contig5937:2849..35231691679641.9783382-CDS-H-elongata_contig5937:2849..3523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 2850..3523 -
1622930962.4527564-CDS-H-elongata_contig5937:3839..38851622930962.4527564-CDS-H-elongata_contig5937:3839..3885Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 3840..3885 -
1691679641.9864676-CDS-H-elongata_contig5937:3839..38851691679641.9864676-CDS-H-elongata_contig5937:3839..3885Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 3840..3885 -
1622930962.4820263-CDS-H-elongata_contig5937:6177..63901622930962.4820263-CDS-H-elongata_contig5937:6177..6390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6178..6390 -
1691679641.9947915-CDS-H-elongata_contig5937:6177..63901691679641.9947915-CDS-H-elongata_contig5937:6177..6390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6178..6390 -
1622930962.5000117-CDS-H-elongata_contig5937:6510..67111622930962.5000117-CDS-H-elongata_contig5937:6510..6711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6511..6711 -
1691679642.0027816-CDS-H-elongata_contig5937:6510..67111691679642.0027816-CDS-H-elongata_contig5937:6510..6711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6511..6711 -
1622930962.5275261-CDS-H-elongata_contig5937:6980..70881622930962.5275261-CDS-H-elongata_contig5937:6980..7088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6981..7088 -
1691679642.0108776-CDS-H-elongata_contig5937:6980..70881691679642.0108776-CDS-H-elongata_contig5937:6980..7088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 6981..7088 -
1622930962.5462909-CDS-H-elongata_contig5937:7595..78171622930962.5462909-CDS-H-elongata_contig5937:7595..7817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 7596..7817 -
1691679642.0187218-CDS-H-elongata_contig5937:7595..78171691679642.0187218-CDS-H-elongata_contig5937:7595..7817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5937 7596..7817 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5937.13448.1

>prot_H-elongata_contig5937.13448.1 ID=prot_H-elongata_contig5937.13448.1|Name=mRNA_H-elongata_contig5937.13448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=536bp
MMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVD
EGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSS
VTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWIL
QTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARL
LIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVS
LSSHLREFSLIDDFRSHREAFRDRSSLRFCEQRAGEIAVKHGIRSEQCKG
VWVKAAKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHLYEVQTGNNIN
NEPSPGIIYSRLSVYGVTSGQERMSSTMRPRCMGPEDLNFVQSILRSTEK
QQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIH
GFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGNVEHCLVNVI
QGGAWEYNTQVYPKLQDLVKACSSLQNVYSDESMS*
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mRNA from alignment at H-elongata_contig5937:2..9484-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5937.13448.1 ID=mRNA_H-elongata_contig5937.13448.1|Name=mRNA_H-elongata_contig5937.13448.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9483bp|location=Sequence derived from alignment at H-elongata_contig5937:2..9484- (Himanthalia elongata Himel1 dioecious)
AGCACGTGGTGGTGGTGAGCGTCAAAGGACAGTTACTCGGTGAGTACGAA GAAAGTCCAGAAACGTGGCTTCGTTGCTTACACCGCTCCCGGACCAGAAG CCAGGCTGTTTTTTTGCCATATGGGTCCCCTGTCAGCCACGACGTACAGG AAATGGGAGGGTGGAAATTGAAGACTCATTCGCGGCATCGTGCGCAGTCG GTCGCGCCTAGGGGGATTCGCATCCGAAAATATTAAGACATGAAGAGATG CCGATGGCGGACTGTGTCACAAGATTTTGCTCGTCGTATGTGGGCGTTTT TCCTCCGCTGGGGGAAATCTATTGCATGGTCTCGGGTTCGGACCCCGACC CTGCCATGCAACCCCAGCTCAAGTTTGTGATACGGGTGGGCCTGCGTCTT GAATAACGTTTCTCTCTCTCACATGGAAATCACCTCGCCATACCAACGTT CGTCGCTGCTCCTCATCACCTCGCTTTTAATATTCCCCCGATCATGTCCT GCTGCAGACAAAGTGGCGCGGGACTTCAGCAATAAATTTTACCCTGCGCT CATCGGCGCGGACGAGACCGTGCAAAGGTCTTTTGATCTTGCGTCCGAAA GTGTGGAAACCGCGGCAAGTAGCGCGGGCGCGAAATTCCTTCTCCTGCCT AATGGTGAGCCGCTGCGGACACCGCACACTTCACCGACAACGCTGGGGCC GGTGTAGGGGTTAAGGCGGCGAATCGGCGTTGCCATCGGGGCTATCACCT CAAAGTATTGTCGCGCTTCGAGGAAGCGCGAGAAATAAAAACAAAAGAAA ACCGAACTAGTGGAGTAAGTTATTGTGAACGGAAAACTAAGGGCAGCGGT AGGTGCAACGATGCTGGCTCAAATTTAAAGATGAAAAGATTGGTTAGAGA AACTCCCCGCGCTAAATCTTGCCTGAAACATCGCCTTTCTGACCCGAAGA TGGAGATACTACAATTGAATTTTATGCACAGTGATCATCCCTCTACCTTC GTCGCTTTGGCGCTCTTTGTCTTGTTATTCCCTACGCCCGATCATCGGTT GGATTGGAGAGACAGGTGCCAACCACGAGGTGAAAATCTTCGACAGCCTG CCGGTGGGAAATTTCGTGGACCTCAGCCCCTCCCTGCCGCCGGTCGTCAA CAAGTTTGTCGCGAGACCAGAATACTTCGGAACGGTGGATCTCCAGGTGA TATGATTGAGGTTGGGCAAAAGGAAAAATAATGCAGCAAAACGGACGACG CCAATAGCAGGGGGTTTCCCTCTCGCGCGCCGCGATCTCCTCACCTCCTT GCAGTGTACCGCGATGCACCACGTAGAGAGGTGAAACGGGCGCATGGAGA GGTCACGTTGCCTGTCGAAGAATAAGTGTCGCGCGGCCCCCTCGTGACTG TTCGAGGCAACGCCAACTGCTCGGCCTGATGGGGCTCTGAGGGTTGCTGA CTGGCACCTCGACGCCACGCCGCGAAGACCCCCGAGTCTGTCGCGCGCCC TCCCCCCTTTCTCCCCTCTCCCCTGTTACCCTACCGCCTCTTCGCATGGC CGCGCTTTTTCTGTCGCTGACCCTCTCGGACGACTCCGCTGCCCTTTATT TCTCTCCTCATTGTATTTTTGCAAAACGAACTGGAACTGATTATGCCGTG CGCAGCGCGCCGTGGAGATGATGGGCAATCCCAACGCGAGATTAATCTCG ATCATGGGCGAGCCAGGGTTGGGCAAGACGGCAAGGGCGGAGAAGGTTTG CGAGTACGTTCGAGATAGGCGCCGCTTCGACAAGATATTTGTAGTGCGCT GCAGGGGTCTTGTGGATGAGGGCTCGAGAGACCTTCGTCCGACACCCGGA GCGGGACACTTGAAGCACATAGAATATTTGTGTCGTCTGGTGAGCATCAG CCATGTCATGTCATGCCGTGCATTGTTATGCTATGTCGTTCGCCGTTTGC TTTCTTCCTTAGATCCACTCGTCGTTAGGTTTGAGTGGGGAGAAACATTG AGGTAAAAAGGCTTCTCGTCACGGCGATCGCCAGGGATACTATGAAAATC GAATAGAAAGAATTTGGTGCTACCCGCCTAGAGACTCTCCCGTCGTGCGC GTGTGCGCGCGGGCGTGTTCTTCGCGGCTCGCATTGCAAAAAAACAACAA CGCGTAGACAGGAAGGAGGTTCGCAAACGAGAATCAGAGATAGCTCTTGT GTCGAAACGTGTCATTTTGATATTTTCCCCGCTTATCCCCGATTCATTTA GAGTTGGGGTCGTAGAGAAAGAGAGAGGAAATTCGTGGTCTCGCTTCGTT CTTGTTCTGTGAGCTACTAGCCCATCCATCCGGCCAATCATTTTTTTGAC CCCCTCCCCCCCTAATAATCGTTAAAATATACCCCGCGTATCTCAGATCG GGTCAGCGATCGGCATGCCTGCACGCGAGCCCACAAGTCCTGTCGCGTTG CATGATTTTCTGGTGAATAGCTCAGTCACATCGGGAGACGAGGTTCAACC AAAGGTGAGACAAAAAGAGACTGATCGGGGGGAAGAAGGGTATGAAGCGT CACGTCGACCGCGGACCCCGTGGGATTTACCTTTCAGGCCAAACCGCCGT GGTTCATATTTACCCCCCCCCCTCCCCTGTGATCGCCCATCAGGAGGAGG GGAGGGGTCGGGACACCGTTCCGACCAAGGTGCGGTTCTTTGTCGCCCTT CCGTCGCTTTCTGACGACGCAATTCGGCATTGTTGTCGTTTTTTGGCACC TCTTTGTCGTTTCCCGTTCGCAGGTGCTCCTCTTCTTAGACGACGCGGAT TCTTTGTTTTACAGCAGGGGCTGCGAAGCGCGCGACAGCCTGGTTGACCT TTTTGACAAACTATTCCGCCGGAGTTCGCACATATGGATCCTCCAGACGG TTGAGCAACACCCACTGGATAGGGCAACCAAGTGCGTCCACAATACCGGC CATAAGGTAAGGATATGCTTGCCCGTCCGCCCCTCGTTTATTTTCCCTCC GCGCGCGACTGTTCAAAACCAGGCGCGCAGCCCCCCCCTCCTTGTCACTC GGTCTCTCGATTCCAATGCCTTGGCGTCTCTTCCTTGGCCCAACTTGCTA CTCGTGCGCGTCTGTAAGACCTGCGAAGTGAAGCCTTTGGGGAACGAAGA CGCCGCAAGACTGCTAATTCACCTCTACCCGCGGGACGGGCGAGGATTCA AGTTTGAAGAGTTAGGCGTACCGAGGGGCTCGTCGATGGCCGATTGTCCC AGCATGATGGTGAACCACCCCGTGTTAGAGTTGGTTGGAGGACATCCGGG CACGCTGGTGAGAGGGATTGTCATCGTACTTAGCTTGGCTTGTTGTCCAT TCGGATACCATTGATTTTGACGTGTTGTGGTTGTCAAACTCTGTATGAAA TGTTTGTAGTAGTGCCGAAGACCTGGACCAGTGGCCCGAGAACACGTCGC TAGGAGTTCAGCCCACGATACAGGAGCTGACAGACGCCATCCGCTCTCTA GCGAACGGAAATGCTGTTGAACCGGGCGGAGTCTCCGTTGAGCTGTTCAA GATCGTCCTCAATCGTGATCCCGCCCTGCGACGGCGACTGTTTGATATCG TCGCGTGCATTTGTATGGGGGGGGGGTACCGACGCAATATGTCATAATCA AGGTCCTCCAAAAAACGGATCGAACAGAGTGCGGCAATTACAGGGGTATC CCGCTTATAGCTCACATCGGTAAGATACTACTGAAGATCATTGCTCGCCA CCTCAGCGACTACGACGAGCGCTTGGGGATTCTGCTTGAAGAACAGAGTG GTTTCCAACCCAACTGTTCCACCGCCGATATAATGTTCGTGATTCGTCGA TTATAGGAGTTGACGCGGAAGAAACGAATTCCGTTGTATGTATACTTTAA TCAAAGCGTAGGACTCTGTTGACCGAACCCTCCTCTGGATAGTACTCGCC GGTTTTGGCCAAAAGATGATCTCGGACATTTTTCATTTCCATGATGACAT GCGAACATGCGTGCGGTTCAACGATAGTGTGTGCTTGGGATGGTTTGCTG TGGAACAGGGCCTCCGTCAAGGGTACATGCTCGCGCCCCTCCTGCTAAAA ACTTCTTCGCGGCAGTTATAAACGTGGCCTACACGCGTTTTAAGGCAGAC AAAGACATCGTGGATGCCCTGATGCCCCTCAATAAGAAAGGGGGAGCGGG GGGGGGGGGGGGGCAGCGGTTGGAGAGTCAGCCCTGGCGAAGTCGCATTG AGCATGGTATACGCTGTCGATGCTGGCGTCGTCTCACAATCGCCCGAACA GCTCAAGAAGATGATAGGCGTGATCGTGGTCTTGTGCGCGGCGTTTTGTC TCACCGTATCGAGATTATATATGTGTTTATGCACGAAGGGGGTGCTAAAG GCCACCGCCACATTCAGTGTTGTGGCAGCAGGCCATGTGTACAACCAAAC GCACGAGTTCGTATACCTCGGGGGACACGTTCACCGCAAGGCCGACATGT CCATCGAGATCGACCGGCGCGTACGTGACACATGATGCAGCTTCAGGAAG TACACCCTTGAACTGTACGACCGACCCAGCGCTCCCCTGGAGCTTCAAAT ACGGATGCTGAAAGCCGAGGTACTCGAGACAATTATGTACAGCTGCGTCA CGTGGAGCCGGCGTGATTGCCTCTACGACACGCTGCGCCGAGCTCACCAT AACGTACTACATCGGTTGGCGAAAAAATAATCGCACCGACAGCCCGATCC CCTATATGGACCCCCTCATGACGGGAAGTGGGAGCATCGAGGCGATTATA CGCAGGAGGCGAATCCTGTTCGAGGGATTTCTTGTTCGCATGGAAGATAC GACACTGCCGAAGTGCCTGATGTTTGGAGAACTCCTGCGGGCGCGAGCTT CGTTGGGGGGTAGAAAAAAAAGTGGATGGGGTGTCTTCTGGACGACCTCA AAGCTTTCGATATCAACGCCGACCACTGGACGATTGCAACCCAAGATAAA GGAGAATGACGCAAGATGGCGTAACAAGGGGGTGGTATTTTCATTAAATT GATCGCTACAGAGAAAGTCAGGGCTGGACAACGGCATGCAGTAATATATA CGCAAACGTAACGGAAAGTCCAACGAGAGGATAGCCAAAGCAAGCGTGTT CACGCTGGTTTTCTCGCCATAGTTGATTAGCCACAAGTAGCACGAACTTG TATCTTTCAGGCGTTTGCCGATGCCATAATGCTAATTTCCGACGTGGTGG GTTTTCTTTTTTGTTTTGGTCTTTTTTTTGCATTCATTGAATCCGCGGCT CTTTGTTCAAATATTCTTCGATCGGCATGCGTCCCGACAGCCACACGCAG ATACTTCACAAATATGTCTTCTTTTTTTGTTTCCTTTTTGTATGGAGAGT ACATAGTGTATCAGCCTCGCCCCTTGATGGCGAATGTAGTCAACAGGTTA GCTTGGCGGTGGTTATTCAATTTCATAGATATATTATCTATAACAGAAAA TGGTGATGAGCTTGCTGTTTTCAGACTTGTCACGCTCATCTAAAGCCATC CGTCTCCATTGTTTCGCCTTCGCCTCTGCGCGCGTCACCCTTTTTCCAGG TGAGCCTTAGTTCACATCTGAGGGAGTTTTCCTTGATTGACGATTACACC AAAGATTTGGTGCGAAGGTGAGCACTTCGTCATTTACTCTGCTATTGTAA ACGTAAGCACCCGTGAATGTGATGTCTTGGCCCTTCTGTTGGTATATGGT GCTTATACAGCGGCGAAATCGTGAAATGCGATTTTCTGTTAGAAACTCAA GAGCATTAAATATCACTCGATATATCTCTTGTGGTTAAGATGCTAACGAG ATTTTCTGCGCTTTGAAACGGACCTACGCTTGCTCGCATTCCCCACACGC GCTCCTCTTTGGACATCATCTTTCGCCCAAACATCTGGCTGCGCGTGTCC ACCGCTCGGCATTCGAAGCCATCGAGAGGCGTTCCGGGACAGGAGCAGCC TGAGGTTCTGCGAGCAGCGCGCGGGAGAGATCGCGGTCAAGCACGGTATA CGGAGTGAACAGTGCAAGGGCGTCTGGGTGAAAGCTGCAAAACAATCCGC GGAAGGTGCACAAGGTTTGTGCAGCTACGGGCCTAGATGGTACGAGAGCG TGCAGCTGGATTTCCTCTTGCGGCAATTGGAACAGCACCTGTACGAAGTC CAAACAGGAAATAACATCAACAATGAGCCAAGTCCAGGCATAATTTACTC TCGGCTGTCTGTCTATGGTGTGACAAGCGGCCAGGAGAGAATGTCCTCGA CCATGAGGCCCCGTTGCATGGGGCCAGAGGACTTGAACTTCGTGCAATCG ATCCTTAGGTCGACGGAAAAACAACAGTGGGAAGGCAGGTCAAGCAACTT TCACCACAACATCATTTCCATCGAGGCGTTCCGAACGTTTTGGGAGTGGT GGGAAGAGACGACAAAGTTGATTTCGCGGGTCATGTACGAGTGGGCATCG ACGACGCCGGTCAAGATTCACGGCTTCGTGAGCAGGGAGGAGGCTGAGAG AAAGCTTCTGGGGAAGAAGCTCGGAACTTTCTTGATTAGGTTCAGCGTAA CCAATCCCGGACAGATTTCGATCAGCTACGAAAATGTGAGCATGATTACC GTACTCGGGCGCACAAACTCGTGCTGGGTGTTCCATATTTACTCCTTGCG TGCGCGATTCGGGCATTGGGTATTATTGACCCACAATCCACTGCGCGCGA TATTCCTGCGCAGTTATGTTTCCTAGTGAGGCTGCGCGAACCCCTACTGG ACTCATTCACCATACGTACGATATGCACGAGCCTATGCCGGCGATATTTT GACGGCGCACAGGGGCATGTAACGTTAATGACACGAAAACAAAAAATACA GCTAAAGGTTGGCCAGCTATAGTGAAGCGCGAAGTCGTTAACTAACCCCA AACATCCACCCCGGCGTGTGTGATTTTGCTCTTTTCACCACCTCTGGATG CCCATCAGCGCGGCAACGTGGAGCATTGTTTGGTTAATGTGATCCAGGGT GGTGCATGGGAATATAATACCCAGGTGTATCCGAAACTGCAAGACCTTGT GAAAGCCTGTTCCTCGCTCCAAAATGTGTACTCCGACGAATCGATGTCTT GAAAGAGGAAAGTGGCCGACGTTGTAGTACCGTAAGCGTCCCTTACGGAG ACGCCGACGCCACAGTATATCTTACCGGCAGAGTACACGCTTTACATCAC GGGGGCATGAATGGGGATGATGGGTGTCTCGTGACAACTGAACAGGCTAT CCGAAGTGTATAGGGTAGTCGGTGCCGCCTGAATGGCTGCACGTTTGCGC TCATGAGACGAGGAAACTTCAGGTCTATTTCGTACGACACACGATCAAAC CGCACGTACTCTACATAATGTTCAATACGATAAGGCGGCGAGACCGACGA AAACGTCTCGGTACGGACATAAGGTTTTATAATATTAGAAGCTCGTCGAT TTTTTGTACTGTTTTGACTGATTTATTTTCCTGCGCTAGTTGCTTCTTGC GTGTGAGCGGGTCTCGTCTTTTCACTTTATTTTTGGTGTCTCGACTTAAG TGTTGCTTTGCGCTTACGGCCGTGTTGCTGGATCACAAGGTGTGTCTTCC TTCGACACTATATGTATAGTTGGGGTACTATCTTGGAAGGTTTTGCCTAT AGTGTGAATCAGTACAGTATTTAATAGTACATTTTTTGTTTTAAGACACC TCGTCTTCGTTTCGTTTTGCGAGGGCACTATTCCACCACATAAAATTAGC TATGTAAAGGTACGCCACTCTTTATTTCCTGAAACGTTTGTGTTCAGGCA GCCGTTGTAATACACGCAAGGCGTACCGTGGACAAACTTTCCCCGGGATT CTTGGCTTTGCTCCCCGCACGTTTCAGTTGTTTCCGCTCTATACTAAATA TATACCACTGCTTCCGTTTCCCACAGTGTGGGTCTTGATTTTTGGTGATG AAACAGTGCTGTAGAGATTGAAGAATCGGGCATGTACTGCATACAGTCCC ATTGTTTCGTGTGTGCGAGGTGCAGATAGCAATAGGAAAAGAGTTTTGAC GCTCATTTCGAGGGCTAGGATTCTCCTCTTTTGCAAGTAACTCGTCTGTA GAATCTAGTTCCAAAGGCGAGGACGCTTTCCCCGTCTCATTCGCTTGGAT TCTGTCCTTAACAGCGACGATATGAGCGGCTAAAATCCGTGGCCTTCGAT CAGAACAGTTTTGCACCTCTTGCATTTCATCAATGTGCGATGACGAAACC CGCCATCTAATTGATTGTATACGTAAGTAGCTCTTTAGAGAGGTGAAAAC GAATCATTGTCTTGTCCGCGGAGTCCTAAGATGCTCCGAAAAAAGGAAGA TTGATGCTACACACAAGGAGATAAAGTTTGAAGTAGTGCCCAAGAGGGTT GTATGCAAAAATTAATGGTTCGGGTATCTGCGCAAAGCTTTGAACATGTA GTATATATTATGTAGATGTTGCAACATTTGAGAATCGTTGCGAGATCGCC TAGATTATTTCAGGGCACTACGAGGGGTTACGAAGTACGCGGGATAGTTT GCCAGTCTTGACAGGGTTCTTAGCAGCGCGGAATCCTTAGATGCTCCGAA AAAAGAAGATTGATGTTACACACAAGGAGCTAAAAAGTGTTGACGTAGTG CCGAAGCGATTTTTATGTAAAAAAGTAATTGTTCGGGTATCTGCGCAAAG CTTTGAAGAGATATAATATATGTAGATGTTGCAACATCTGAGAAGCGTTG TGAGATCGCCTAGATTATGACAGGGTACTACGAGCGGTAACCCTAAGGGA TTACCAAGTACGCGGGATAGTTTTCCAGTCTTGCAGGGTTCTTAGCAGCT GAGGGAACTGAGCGAGACTCATCGACTCTTTTCTTCTCATTTGAGGGTAT CAGTTTCCTGGCGTGAAATATATCGAGATATTGTTGCTCGAGGAGTAGAA TGGTTACCATGTGTGGTAAGCCATTAGTTGAGTTCGATTATTACCAGGAC TTGTTATTTTATATATGTAGCGGAAAACGATAGTGAGCAAAGTTCAGCGA CTAGTTGACGAGGCGCAGGAGTGCTGAGTTACTTGTATCATCCGGTAGAG GTGTGTAAATTCCTGAAGGGCTACAGATTTTTAGTCGGTGTTATTGGCAA TCTAGCACGCTGGAGGACCCATCGGCAGAAAAAGGCACCCCCCCCAAATA ACTGCTGATCACGCGAATTAGTTGAAAATCGACTTTGTTATAGAGGATGG GTGAGGTGCGCAATGTGTAGCAAAACATGCAAAAATATAAAATATTTCTC ACGAAATATTTTATGGCGGTCAGAAAGTGCATAAATATTTATTTATTTAT TATTTATTTATTTGTATTCTAGTTGTATTAATATTGTCTTACTTTCAAAT AGTATACGACATATATGCCACTACTACAGCACT
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Coding sequence (CDS) from alignment at H-elongata_contig5937:2..9484-

>mRNA_H-elongata_contig5937.13448.1 ID=mRNA_H-elongata_contig5937.13448.1|Name=mRNA_H-elongata_contig5937.13448.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3216bp|location=Sequence derived from alignment at H-elongata_contig5937:2..9484- (Himanthalia elongata Himel1 dioecious)
ATGATGGGCAATCCCAACGCGAGATTAATCTCGATCATGGGCGAGCCAGG
GTTGGGCAAGACGGCAAGGGCGGAGAAGGTTTGCGAGTACGTTCGAGATA
GGCGCCGCTTCGACAAGATATTTGTAGTGCGCTGCAGGGGTCTTGTGGAT
GAGGGCTCGAGAGACCTTCGTCCGACACCCGGAGCGGGACACTTGAAGCA
CATAGAATATTTGTGTCGTCTGATGATGGGCAATCCCAACGCGAGATTAA
TCTCGATCATGGGCGAGCCAGGGTTGGGCAAGACGGCAAGGGCGGAGAAG
GTTTGCGAGTACGTTCGAGATAGGCGCCGCTTCGACAAGATATTTGTAGT
GCGCTGCAGGGGTCTTGTGGATGAGGGCTCGAGAGACCTTCGTCCGACAC
CCGGAGCGGGACACTTGAAGCACATAGAATATTTGTGTCGTCTGATCGGG
TCAGCGATCGGCATGCCTGCACGCGAGCCCACAAGTCCTGTCGCGTTGCA
TGATTTTCTGGTGAATAGCTCAGTCACATCGGGAGACGAGGTTCAACCAA
AGATCGGGTCAGCGATCGGCATGCCTGCACGCGAGCCCACAAGTCCTGTC
GCGTTGCATGATTTTCTGGTGAATAGCTCAGTCACATCGGGAGACGAGGT
TCAACCAAAGGTGCTCCTCTTCTTAGACGACGCGGATTCTTTGTTTTACA
GCAGGGGCTGCGAAGCGCGCGACAGCCTGGTTGACCTTTTTGACAAACTA
TTCCGCCGGAGTTCGCACATATGGATCCTCCAGACGGTTGAGCAACACCC
ACTGGATAGGGCAACCAAGTGCGTCCACAATACCGGCCATAAGGTAAGGA
TATGCTTGCCCGTGCTCCTCTTCTTAGACGACGCGGATTCTTTGTTTTAC
AGCAGGGGCTGCGAAGCGCGCGACAGCCTGGTTGACCTTTTTGACAAACT
ATTCCGCCGGAGTTCGCACATATGGATCCTCCAGACGGTTGAGCAACACC
CACTGGATAGGGCAACCAAGTGCGTCCACAATACCGGCCATAAGGTAAGG
ATATGCTTGCCCTTGCTACTCGTGCGCGTCTGTAAGACCTGCGAAGTGAA
GCCTTTGGGGAACGAAGACGCCGCAAGACTGCTAATTCACCTCTACCCGC
GGGACGGGCGAGGATTCAAGTTTGAAGAGTTAGGCGTACCGAGGGGCTCG
TCGATGGCCGATTGTCCCAGCATGATGGTGAACCACCCCGTGTTAGAGTT
GGTTGGAGGACATCCGGGCACGCTGTTGCTACTCGTGCGCGTCTGTAAGA
CCTGCGAAGTGAAGCCTTTGGGGAACGAAGACGCCGCAAGACTGCTAATT
CACCTCTACCCGCGGGACGGGCGAGGATTCAAGTTTGAAGAGTTAGGCGT
ACCGAGGGGCTCGTCGATGGCCGATTGTCCCAGCATGATGGTGAACCACC
CCGTGTTAGAGTTGGTTGGAGGACATCCGGGCACGCTGGTGAGCCTTAGT
TCACATCTGAGGGAGTTTTCCTTGATTGACGATTGTGAGCCTTAGTTCAC
ATCTGAGGGAGTTTTCCTTGATTGACGATTTTCGAAGCCATCGAGAGGCG
TTCCGGGACAGGAGCAGCCTGAGGTTCTGCGAGCAGCGCGCGGGAGAGAT
CGCGGTCAAGCACGGTATACGGAGTGAACAGTGCAAGGGCGTCTGGGTGA
AAGCTGCAAAACAATCCGCGGAAGGTGCACAAGGTTTGTGCAGCTACGGG
CCTAGATGGTACGAGAGCGTGCAGCTGGATTTCCTCTTGCGGCAATTGGA
ACAGCACCTGTACGAAGTCCAAACAGGAAATAACATCAACAATGAGCCAA
GTCCAGGCATAATTTACTCTCGGCTGTCTGTCTATGGTGTGACAAGCGGC
CAGGAGAGAATGTCCTCGACCATGAGGCCCCGTTGCATGGGGCCAGAGGA
CTTGAACTTCGTGCAATCGATCCTTAGGTCGACGGAAAAACAACAGTGGG
AAGGCAGGTCAAGCAACTTTCACCACAACATCATTTCCATCGAGGCGTTC
CGAACGTTTTGGGAGTGGTGGGAAGAGACGACAAAGTTGATTTCGCGGGT
CATGTACGAGTGGGCATCGACGACGCCGGTCAAGATTCACGGCTTCGTGA
GCAGGGAGGAGGCTGAGAGAAAGCTTCTGGGGAAGAAGCTCGGAACTTTC
TTGATTAGGTTCAGCGTAACCAATCCCGGACAGATTTCGATCAGCTACGA
AAATTTCGAAGCCATCGAGAGGCGTTCCGGGACAGGAGCAGCCTGAGGTT
CTGCGAGCAGCGCGCGGGAGAGATCGCGGTCAAGCACGGTATACGGAGTG
AACAGTGCAAGGGCGTCTGGGTGAAAGCTGCAAAACAATCCGCGGAAGGT
GCACAAGGTTTGTGCAGCTACGGGCCTAGATGGTACGAGAGCGTGCAGCT
GGATTTCCTCTTGCGGCAATTGGAACAGCACCTGTACGAAGTCCAAACAG
GAAATAACATCAACAATGAGCCAAGTCCAGGCATAATTTACTCTCGGCTG
TCTGTCTATGGTGTGACAAGCGGCCAGGAGAGAATGTCCTCGACCATGAG
GCCCCGTTGCATGGGGCCAGAGGACTTGAACTTCGTGCAATCGATCCTTA
GGTCGACGGAAAAACAACAGTGGGAAGGCAGGTCAAGCAACTTTCACCAC
AACATCATTTCCATCGAGGCGTTCCGAACGTTTTGGGAGTGGTGGGAAGA
GACGACAAAGTTGATTTCGCGGGTCATGTACGAGTGGGCATCGACGACGC
CGGTCAAGATTCACGGCTTCGTGAGCAGGGAGGAGGCTGAGAGAAAGCTT
CTGGGGAAGAAGCTCGGAACTTTCTTGATTAGGTTCAGCGTAACCAATCC
CGGACAGATTTCGATCAGCTACGAAAATCGCGGCAACGTGGAGCATTGTT
TGGTTAATGTGATCCAGGGTGGTGCATGGGAATATAATACCCAGGTGTAT
CCGAAACTGCAAGACCTTGTGAAAGCCTGTTCCTCGCTCCAAAATGTGTA
CTCCGACGAATCGATGTCTTGACGCGGCAACGTGGAGCATTGTTTGGTTA
ATGTGATCCAGGGTGGTGCATGGGAATATAATACCCAGGTGTATCCGAAA
CTGCAAGACCTTGTGAAAGCCTGTTCCTCGCTCCAAAATGTGTACTCCGA
CGAATCGATGTCTTGA
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