mRNA_H-elongata_contig59032.13414.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: D7G4C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C8_ECTSI) HSP 1 Score: 236 bits (602), Expect = 3.780e-72 Identity = 123/154 (79.87%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 4 VLYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
VLY+ G++Y FLGLAIV DEFFQ+SLE IS+ L+LTPDVAGATFLAAGSS+PELFTS+ADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAG G SIHIDWRPV RD+IFY SI +L LVF+DSEV WWEGLIM L+Y +YI+FMKYN+RI
Sbjct: 88 VLYIAGVVYCFLGLAIVCDEFFQTSLEKISDVLRLTPDVAGATFLAAGSSAPELFTSLADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGSGGRSIHIDWRPVCRDIIFYTFSIAVLGLVFIDSEVMWWEGLIMFLAYIVYIIFMKYNSRI 241
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: D8LLM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM0_ECTSI) HSP 1 Score: 190 bits (483), Expect = 5.060e-55 Identity = 105/150 (70.00%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 16 VGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
V IL++F GLAIV DEFFQ+SLE ISE L LTPDVAGATFLAAGSS+PELFTS+AD FG +NS G GTIVGSAMFN+LVIVALSAAVA +SG S ID R V+RDV FY SI +L D E++WWE LIM L+YG+YI+FM YN+RI
Sbjct: 32 VAILFTFNGLAIVCDEFFQASLEKISEVLGLTPDVAGATFLAAGSSAPELFTSIADVFGPSNSIGVGTIVGSAMFNVLVIVALSAAVAVKSGTSGTIDHRVVARDVSFYTCSIFMLVAAASDGEIRWWEALIMVLAYGLYIVFMVYNSRI 181
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: A0A7S2G6T6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6T6_9STRA) HSP 1 Score: 166 bits (420), Expect = 6.110e-46 Identity = 93/150 (62.00%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 19 GILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEAN-STGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
GI++ F+G+AIV DE+FQ +LEAISE L L+ DVAGATFLAAGSS+PELFTS++DAF S G GTIVGSAMFNILVIVALS AVAG+SGAS+ IDWRPV+RDV +Y +SI+++ F D +V E IM ++Y YI+FM +N ++
Sbjct: 133 GIIFIFVGIAIVCDEYFQPALEAISEALDLSADVAGATFLAAGSSAPELFTSLSDAFSVCPASMGIGTIVGSAMFNILVIVALSCAVAGQSGASLLIDWRPVARDVTYYTISILMMAAFFDDGKVTVAEAAIMVVAYFSYIVFMMFNEKV 282
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: A0A7S2JRH5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2JRH5_9DINO) HSP 1 Score: 146 bits (368), Expect = 5.310e-42 Identity = 82/128 (64.06%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 25 LYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGL 408
LY FLG+AI+ DE+F SLE IS L L+ DVAGATFLAAGSS+PELFTSVAD FG N+ G GTIVGSAMFNIL+IVALSAA + IDWRPV RD FY SI +L L F+D ++WWE L
Sbjct: 34 LYIFLGIAIICDEWFVPSLERISGVLNLSADVAGATFLAAGSSAPELFTSVADTFGPGNNIGIGTIVGSAMFNILIIVALSAAATSER---LSIDWRPVVRDCGFYASSICLLALFFIDGLIEWWESL 158
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: UPI00193ADE51 (sodium/potassium/calcium exchanger Nckx30C-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193ADE51) HSP 1 Score: 157 bits (397), Expect = 1.320e-41 Identity = 85/155 (54.84%), Postives = 120/155 (77.42%), Query Frame = 1
Query: 1 VVLYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
V+LY++ IL+ F+GLAI+ D+FF +SLEAIS+RL L+ DVAGATF+AAGSS+PELF S+A A G + G GTIVGSA+FN+L+I+AL+AA+AG+ + +DWRP RD IFY +SIV + LD++ +WE L++ + Y +YI+ MK+NAR+
Sbjct: 267 VLLYIIIILFLFIGLAIICDDFFIASLEAISQRLNLSEDVAGATFMAAGSSAPELFISIAGA-GAGSDVGVGTIVGSAVFNLLIIIALTAALAGKV---LCLDWRPFVRDSIFYAMSIVAFIVFSLDTQFTYWESLMLLVLYALYIVVMKFNARL 417
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: A0A2R5GJK9_9STRA (Sodium/potassium/calcium exchanger 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJK9_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.330e-41 Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 1
Query: 10 YVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAF--GEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNAR 462
Y+ +L+ FLGLAIV D++ S+LE ISE L L+ DVAGATFLAAGSS+PELF S+AD S G GT+VGSA+FNILVI+ LSA +AG +++H+DWRP++RDV FY +SIV L V +D E WWEGLI+ Y +YI FM NAR
Sbjct: 95 YIAIMLFLFLGLAIVCDDYLVSALERISEALNLSEDVAGATFLAAGSSAPELFVSLADNVISNPPKSVGVGTVVGSAIFNILVIIGLSAMLAG---STLHLDWRPLARDVTFYVVSIVALLGVIIDEEAHWWEGLILLFLYSLYIGFMTVNAR 244
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: A0A7S2H048_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H048_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.380e-41 Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 1
Query: 7 LYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTG--TGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
LY++ +Y F L IV DE+F SLE ISE L+L+ DVAGATF+AAGSS+PELF SVAD FG ++ +G GTIVGSAMFNILVIVA+SAA I IDW+PV RD FY ++I+++ ++ DS V W+EGLIM + YG YILFM +N ++
Sbjct: 47 LYLIITVYLFSALGIVCDEWFVPSLEKISEVLQLSSDVAGATFMAAGSSAPELFVSVADTFGPSHGSGYGIGTIVGSAMFNILVIVAMSAACCSDE---IVIDWKPVVRDCFFYSVAILVMIVIISDSVVTWYEGLIMVIMYGCYILFMVFNKKL 198
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: UPI000703FCED (sodium/potassium/calcium exchanger 4 n=1 Tax=Myotis brandtii TaxID=109478 RepID=UPI000703FCED) HSP 1 Score: 146 bits (369), Expect = 7.250e-41 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 VVLYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
V+L+++G LY F LAIV D+FF SLE I E+L L+ DVAGATF+AAGSS+PELF S+ F G GTIVGSA+FNIL I+ + AG+ + + W V RD ++Y LS+++L D E+ WWEGL++ + YG YIL MKYN +I
Sbjct: 58 VLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFASIIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFAGQV---VQLTWWAVCRDSVYYTLSVIVLIAFIYDEEIVWWEGLVLIILYGFYILIMKYNVKI 209
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: E4WSP3_OIKDI (Na_Ca_ex domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WSP3_OIKDI) HSP 1 Score: 146 bits (369), Expect = 7.440e-41 Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 10 YVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
Y V IL+ F+ +AI+ D+FF SLEAISE+L L+ DVAGATF+AAGSS+PELFTS+ E + G GTIVGSA+FN+LVIVALS+A+AG++ A +DWRP++RD +Y LSI L D + WWE LI+T+ Y IY++ M +N ++
Sbjct: 103 YCVAILWLFVAVAIICDDFFVPSLEAISEKLDLSEDVAGATFMAAGSSAPELFTSLLGVTKETD-VGVGTIVGSAVFNLLVIVALSSALAGKTLA---LDWRPLARDSTYYALSIGFLVAFAWDGYITWWEALILTMLYVIYVVIMTFNQQL 250
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Match: V8P132_OPHHA (Sodium/potassium/calcium exchanger 2 (Fragment) n=1 Tax=Ophiophagus hannah TaxID=8665 RepID=V8P132_OPHHA) HSP 1 Score: 145 bits (365), Expect = 8.080e-40 Identity = 74/155 (47.74%), Postives = 112/155 (72.26%), Query Frame = 1
Query: 1 VVLYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSSSPELFTSVADAFGEANSTGTGTIVGSAMFNILVIVALSAAVAGRSGASIHIDWRPVSRDVIFYCLSIVILTLVFLDSEVQWWEGLIMTLSYGIYILFMKYNARI 465
V+L+++G++Y F+ LAIV DEFF SL I+E+LK++ DVAGATF+AAG S+PELFTS+ F ++ G GTIVGSA+FNIL ++ + A + + +H+ W P+ RDV FY L +++L + FLD+ ++WWE LI+ +Y Y+ FMK+N ++
Sbjct: 86 VLLHIIGMIYMFVALAIVCDEFFVPSLTVITEKLKISDDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVIGMCALFSKQI---LHLTWWPLFRDVSFYILDLILLIIFFLDNFIRWWESLILLSAYISYVTFMKFNVQV 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59032.13414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59032.13414.1 >prot_H-elongata_contig59032.13414.1 ID=prot_H-elongata_contig59032.13414.1|Name=mRNA_H-elongata_contig59032.13414.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp VVLYVVGILYSFLGLAIVADEFFQSSLEAISERLKLTPDVAGATFLAAGSback to top mRNA from alignment at H-elongata_contig59032:1375..1839- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59032.13414.1 ID=mRNA_H-elongata_contig59032.13414.1|Name=mRNA_H-elongata_contig59032.13414.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=465bp|location=Sequence derived from alignment at H-elongata_contig59032:1375..1839- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59032:1375..1839- >mRNA_H-elongata_contig59032.13414.1 ID=mRNA_H-elongata_contig59032.13414.1|Name=mRNA_H-elongata_contig59032.13414.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig59032:1375..1839- (Himanthalia elongata Himel1 dioecious)back to top |