mRNA_H-elongata_contig58991.13404.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A6H5K346_9PHAE (GB1/RHD3-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K346_9PHAE) HSP 1 Score: 226 bits (576), Expect = 7.300e-67 Identity = 146/247 (59.11%), Postives = 155/247 (62.75%), Query Frame = 1
Query: 1 EGEKENSGPRSFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELAT-------------EDGGNETRLGVS-AEKEGTGERDNASHLLEQHRSLSLKGDASGVNSAVRLAAKARASAQARRDAVATASGLGD------------------------AGAPAASLDRAERPFQRLEFLVRDWQ 627
E E E S RSF WRGGVERMTTGIWIWSEPF+R+ EGGK+VAVL+VDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMAL KE LAT E R G A EGTG SLKG A+ V +AV AAKA+A+A+ARR A A G A A AS DR ERPFQRLEFLVRDWQ
Sbjct: 118 EEEGEGSSLRSFEWRGGVERMTTGIWIWSEPFVRRMEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALNKEYALATGADTDTXXXXXXXXXXXXENRTGGDPAAGEGTGPP-------------SLKGGATAVLTAVGFAAKAKANAEARRAAAAGEGGXXXXXXXXXXXXGXXXXXXXXXXXXXXAVAAPASQDRMERPFQRLEFLVRDWQ 351
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A7S3XHU9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHU9_HETAK) HSP 1 Score: 156 bits (394), Expect = 4.590e-45 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
Query: 31 SFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALT 312
SF W+GG ER TTGIW+WSEPF R G+K A+LLVDTQGMFDNETSMGLTACIF +STL+SS QIYNV+KR+QED+LQQLALF+EYGRMALT
Sbjct: 61 SFGWKGGHERQTTGIWMWSEPFFRTVANGEKAAILLVDTQGMFDNETSMGLTACIFGLSTLISSHQIYNVDKRVQEDNLQQLALFAEYGRMALT 154
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A836CGS0_9STRA (Anti-viral guanylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS0_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.340e-43 Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 1
Query: 25 PRSFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGG 345
P SF WRGG RMTTGIW+WSEPF R+ GG+ VAVLLVDTQGMFDNETSMGLTA IF +STL+SS QIYNVEKRIQEDHLQQLALFSEYGRMAL +Q+ A DGG
Sbjct: 112 PLSFEWRGGQTRMTTGIWMWSEPFFRRAIGGETVAVLLVDTQGMFDNETSMGLTASIFGLSTLISSHQIYNVEKRIQEDHLQQLALFSEYGRMALAHKQDGA--DGG 216
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A7R9YAI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI8_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.430e-40 Identity = 77/112 (68.75%), Postives = 92/112 (82.14%), Query Frame = 1
Query: 34 FAWRGGVERMTTGIWIWSEPFMRQT--EGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQ--ELATEDGGNETR 357
F WRGG ER TTGIW+WS+PF RQ+ EGG K+AVLLVDTQGMFDNET+M LT+CIF +STL+SS QIYNVEKRI ED+LQ LA+FSEYGR+ ++ E+ E EDGG ET+
Sbjct: 105 FKWRGGTERQTTGIWMWSKPFFRQSAIEGGAKIAVLLVDTQGMFDNETTMALTSCIFGISTLISSHQIYNVEKRISEDNLQHLAMFSEYGRVGVSSEEDGEGEQEDGGEETK 216
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: B8C0C1_THAPS (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0C1_THAPS) HSP 1 Score: 152 bits (383), Expect = 2.990e-39 Identity = 93/202 (46.04%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 31 SFAWRGGVERMTTGIWIWSEP-FMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNETRLGVSAEKEGT--GERDNASHLLEQHRSLSLKGDASGVNSAVRLAAKARASAQARRDAVATASGLGDAGAPAASLDRAERPFQRLEFLVRDWQ 627
SF WRGG ER TTG+W+WS+P F+ ++E G++VAVLLVDTQGMFD+ET++GLTA IF +STLLSS QIYNV+KRIQED+LQQLALFSEYGRMA E++ A +G S E EGT GE+D A+ + PFQ++EFLVRDWQ
Sbjct: 181 SFDWRGGTERNTTGMWMWSDPYFLPRSENGEEVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFSEYGRMAFEAEEKAAA------MGVGKSDEDEGTAGGEKDGATKKTAH-----------------------------------------------------KEPFQKIEFLVRDWQ 323
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A4D9DBZ0_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBZ0_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.640e-38 Identity = 95/201 (47.26%), Postives = 108/201 (53.73%), Query Frame = 1
Query: 31 SFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNETRLGVSAEKEGTGERDNASHLLEQHRSLSLKGDASGVNSAVRLAAKARASAQARRDAVATASGLGDAGAPAASL---DRAERPFQRLEFLVRDW 624
SF WR G ER TTGIW+WSE F+R+ G++VAVLL+DTQGMFDNETSM LTACIF +STLLSS QIYNV+ RIQED+LQ LALFSEYGR+AL E G R G EGT + H S + G A L D E PFQR+EFLVRDW
Sbjct: 123 SFQWRAGKERTTTGIWMWSEAFVRRVANGEEVAVLLMDTQGMFDNETSMNLTACIFGLSTLLSSYQIYNVQNRIQEDNLQHLALFSEYGRIALAGE-------AGKLVRQGKKQGDEGTD---------KGHEEKS------------------------------------EGGVEAEELMLPDEDEIPFQRVEFLVRDW 271
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: F0WY98_9STRA (Atlastinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WY98_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.640e-38 Identity = 90/203 (44.33%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 19 SGPRSFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNETRLGVSAEKEGTGERDNASHLLEQHRSLSLKGDASGVNSAVRLAAKARASAQARRDAVATASGLGDAGAPAASLDRAERPFQRLEFLVRDWQ 627
+G + F+WR G +R TTGIW+W + F+R+TE G+ VAV LVDTQGMFD+ETS LTA IF +STLLSS QIYNV+KR+QED++Q LALFSEYGRMAL G +ET + A L+ R LS++ S V++ A+ P + RPFQ+L+FLVRDWQ
Sbjct: 121 NGSKGFSWRAGRKRNTTGIWMWEQAFLRKTESGEDVAVFLVDTQGMFDSETSQMLTASIFGLSTLLSSYQIYNVDKRVQEDNMQHLALFSEYGRMALF---------GHDETNRNIQA--------------LDS-RCLSIRKTHSSVSTNEENAS----------------------AGPENDKKKGSRPFQKLDFLVRDWQ 277
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A7S2NXQ9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXQ9_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.020e-37 Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 1
Query: 34 FAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNE 351
F WRGG ER TTGIW+WSEPF R G K++VLLVDTQGMFD+ET+M LTA IF +STLLSS QIYNV+KRIQED+LQQLALFSEYGRMAL +E+ ++ D +E
Sbjct: 157 FDWRGGSERNTTGIWMWSEPFSRTRADGSKISVLLVDTQGMFDHETTMALTAAIFGLSTLLSSHQIYNVDKRIQEDNLQQLALFSEYGRMALEQEKRESSADDSDE 262
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: A0A024U1Y5_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1Y5_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.080e-37 Identity = 89/205 (43.41%), Postives = 123/205 (60.00%), Query Frame = 1
Query: 19 SGPRSFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNETRLGVSAEKEGTGERDNASHLLEQHRSLSLKGDASGVNSAVRLAAKARASAQARRDAVATASGLGDAGAPAASLDRAE--RPFQRLEFLVRDWQ 627
+G F+WR G +R TTGIW+WSEPF+R++ G+ +AV L+DTQGMFD+ETS LTA IF +STL SS QIYNV+KR+QED+LQ LALF+EYGRMAL + E+G N+ S + R + +++ + ++ D +++ D SG+GD A++D RPFQ L+FLVRDWQ
Sbjct: 110 NGEAGFSWRAGRKRNTTGIWMWSEPFIRKSSLGEDIAVFLIDTQGMFDSETSQMLTASIFGLSTLFSSYQIYNVDKRVQEDNLQHLALFTEYGRMALQG----SIEEGENQLMKEASMRSIQSFARVISDKQMQRQGNSTVSNDMGELDAT-----------DVEDDGTTETSGVGDD----ANVDDEPVIRPFQHLDFLVRDWQ 295
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Match: K0TPQ6_THAOC (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPQ6_THAOC) HSP 1 Score: 147 bits (371), Expect = 3.110e-37 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 31 SFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLLSSCQIYNVEKRIQEDHLQQLALFSEYGRMALTKEQELATEDGGNETRLGVSAEKEGTGERD 399
SF WRGG ER TTGIW+WS+P+ + +GG+ VAVLLVDTQGMFD+ET++GLTA IF +STLLSS QIYNV+KRIQED+LQQLALF+EYGRMA E++ A A K+ GERD
Sbjct: 559 SFDWRGGKERNTTGIWMWSDPYYLKRDGGEDVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFTEYGRMAFENEEKAA-------------ATKDAPGERD 668 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58991.13404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58991.13404.1 >prot_H-elongata_contig58991.13404.1 ID=prot_H-elongata_contig58991.13404.1|Name=mRNA_H-elongata_contig58991.13404.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp EGEKENSGPRSFAWRGGVERMTTGIWIWSEPFMRQTEGGKKVAVLLVDTQback to top mRNA from alignment at H-elongata_contig58991:2158..3639- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58991.13404.1 ID=mRNA_H-elongata_contig58991.13404.1|Name=mRNA_H-elongata_contig58991.13404.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1482bp|location=Sequence derived from alignment at H-elongata_contig58991:2158..3639- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58991:2158..3639- >mRNA_H-elongata_contig58991.13404.1 ID=mRNA_H-elongata_contig58991.13404.1|Name=mRNA_H-elongata_contig58991.13404.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1266bp|location=Sequence derived from alignment at H-elongata_contig58991:2158..3639- (Himanthalia elongata Himel1 dioecious)back to top |