mRNA_H-elongata_contig58831.13382.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: D7FVP4_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP4_ECTSI) HSP 1 Score: 158 bits (399), Expect = 8.190e-45 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 10 QDPVKRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVKQLRFQRRATRLLS 324
+ P ++W+PYMCNLAV + YRG G G+QLVRLCEHVAKN WGY+RMYLHVDL DPAA GLYSSMGYE I +YD P+W+R+L G PTIRYQVK+ + ++ A L +
Sbjct: 275 EKPPEQWQPYMCNLAVAEEYRGNGYGKQLVRLCEHVAKNSWGYERMYLHVDLGDPAATGLYSSMGYEGIEKYDAPLWMRKLFGWPTIRYQVKRFKGRKGAPALAA 379
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: D7FVP3_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP3_ECTSI) HSP 1 Score: 135 bits (339), Expect = 5.690e-38 Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 16 PVKRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVK 285
P+ WEPYMCNLAV + YRG G G+QLVRLCE VAK HWGY+RMYLHVD PAA LYSSMGYE + Q+ P W+++LLG+ I YQVK
Sbjct: 91 PMTGWEPYMCNLAVTEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVK 180
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A6H5KVK2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK2_9PHAE) HSP 1 Score: 135 bits (339), Expect = 7.900e-36 Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 16 PVKRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVK 285
P+ WEPYMCNLAV + YRG G G+QLVRLCE VAK HWGY+RMYLHVD PAA LYSSMGYE + Q+ P W+++LLG+ I YQVK
Sbjct: 306 PMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVK 395
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A7S2GAU2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAU2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-20 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 1 WSDQDPVKRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVD--LDDPAAMGLYSSMGYESITQYDT-PVWIRRLLGMPTIRYQVKQL 291
W +K PY+CN+AV ++ R K +G L+RLCE +A+ HW + +YLHVD DD AA+ LY+S+GYE++ + + P + R LGMP++ KQL
Sbjct: 22 WRPDPVLKDLRPYVCNVAVAEAARRKKIGTNLLRLCEQIARRHWDFDEIYLHVDPSKDDAAALKLYTSLGYENVPELNICPGPLDRALGMPSLISMKKQL 121
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A836CNC1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC1_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.010e-20 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 31 EPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDT-PVWIRRLLGMPTIRYQVKQLR 294
EPY+CNLAV + +RG+G+G+QLVRL EH+ +N W +YLHVD + A+ LY SMGY T P W+ LL +P + Y K LR
Sbjct: 158 EPYLCNLAVSERWRGQGIGKQLVRLSEHIVRNCWAGSCLYLHVDPSNEIALQLYQSMGYRPAAPTHTLPPWLLSLLAVPQVTYFSKSLR 246
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A448ZI05_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI05_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.610e-19 Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 31 EPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVKQL 291
+PY+ NL V++ +RG+ +GR LVR E++AKN WGY RMYLHVD D+PAA+ LY S GY + P W G I Y VK L
Sbjct: 253 QPYLSNLCVDEKFRGQKIGRGLVRCVENIAKNSWGYNRMYLHVDEDNPAALNLYKSEGYSDVGHRWNPFWSG---GASEIGYYVKSL 336
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A7S4AXY7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXY7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.470e-17 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 31 EPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVKQL 291
+PY+ NL V++ +RG+ +GR LVR E+VAKN WGY R+YLHVD D+ AA+ LY S GY + P W G I Y VK L
Sbjct: 282 QPYLSNLCVDEKFRGQKIGRGLVRCIENVAKNSWGYNRIYLHVDEDNIAALNLYKSEGYRDVGHRWNPFWSG---GASEIGYYVKSL 365
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: B7FSR9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR9_PHATC) HSP 1 Score: 81.6 bits (200), Expect = 5.450e-16 Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 31 EPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMPTIRYQVKQL 291
+PY+ NL V + YRG+G+GR LVR E ++K WGY R+YLHVD D+ AA+ LY GY + P W + + I Y VK L
Sbjct: 256 QPYLGNLCVAERYRGRGIGRALVRCVEDISKTKWGYSRIYLHVDKDNAAALNLYQEEGYRDVGLRWKPFWAGKAVD---IGYYVKGL 339
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A7S2EB23_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EB23_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.470e-15 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 22 KRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVW 240
K +PY+CNL V + RG+ LG+ LVR E + WGY ++YLHVDLD+ AA+ LY S G++ + P W
Sbjct: 259 KTLQPYLCNLCVSEQMRGRKLGKALVRCVEKITTETWGYSKLYLHVDLDNVAALNLYRSEGFKDVGFRWNPFW 331
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Match: A0A1U7I2R3_9CYAN (N-acetyltransferase domain-containing protein n=2 Tax=Phormidium ambiguum TaxID=71191 RepID=A0A1U7I2R3_9CYAN) HSP 1 Score: 71.6 bits (174), Expect = 5.340e-13 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 34 PYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYLHVDLDDPAAMGLYSSMGYESITQYDTPVWIRRLLGMP 264
PY+ N+AV+ SYR +G+ RQL+ CE +A N WGY+ +YLHV ++ A GLYS +GY + Q D+ W LLG P
Sbjct: 130 PYLSNVAVQSSYRRRGIARQLLLACEQIALN-WGYQDLYLHVLENNHKARGLYSQLGYR-LHQVDSN-WACFLLGKP 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58831.13382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58831.13382.1 >prot_H-elongata_contig58831.13382.1 ID=prot_H-elongata_contig58831.13382.1|Name=mRNA_H-elongata_contig58831.13382.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp WSDQDPVKRWEPYMCNLAVEKSYRGKGLGRQLVRLCEHVAKNHWGYKRMYback to top mRNA from alignment at H-elongata_contig58831:162..716+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58831.13382.1 ID=mRNA_H-elongata_contig58831.13382.1|Name=mRNA_H-elongata_contig58831.13382.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=555bp|location=Sequence derived from alignment at H-elongata_contig58831:162..716+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58831:162..716+ >mRNA_H-elongata_contig58831.13382.1 ID=mRNA_H-elongata_contig58831.13382.1|Name=mRNA_H-elongata_contig58831.13382.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at H-elongata_contig58831:162..716+ (Himanthalia elongata Himel1 dioecious)back to top |