mRNA_H-elongata_contig58791.13377.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A836CLM1_9STRA (Thiolase, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM1_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.520e-14 Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 58 SPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
SP+D++VV +RT ITRAKKGAFKDTTPDVLLA VL VL RTGV D+GE+
Sbjct: 3 SPDDIVVVAAVRTPITRAKKGAFKDTTPDVLLATVLRTVLERTGVMGEDLGEI 55
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: I0YTA0_COCSC (Thiolase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YTA0_COCSC) HSP 1 Score: 70.5 bits (171), Expect = 2.300e-12 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 7 SAAVAAGQTNTLAGVPESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
++A AAG + P+DV++V +RT IT+AK+G FKDT PD L+A V A L RTG+NP+D+G++
Sbjct: 38 ASACAAGDSAAYERRASGPDDVVIVSALRTPITKAKRGGFKDTLPDDLMAAVFQATLDRTGINPADIGDI 107
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A672R1Y3_SINGR (Thiolase_N domain-containing protein n=2 Tax=Cyprininae TaxID=2743694 RepID=A0A672R1Y3_SINGR) HSP 1 Score: 63.9 bits (154), Expect = 1.330e-11 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 61 PEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEVPC 222
P D++VV +RTAI RAK+G+FKDTTPD LL+ V+ AVL G+ PS +G+V C
Sbjct: 29 PNDIVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMRAVLKDVGLRPSLLGDVCC 82
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: UPI000C6F67BB (3-ketoacyl-CoA thiolase, peroxisomal-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6F67BB) HSP 1 Score: 64.7 bits (156), Expect = 1.340e-11 Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 61 PEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
P+DV+VV +RTAI RAK+G+FKDTTPD LL+ V+ AVL G++P+++G+V
Sbjct: 40 PDDVVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMTAVLTDVGLSPAELGDV 91
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A3B4WSX7_SERLL (Thiolase_N domain-containing protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WSX7_SERLL) HSP 1 Score: 64.7 bits (156), Expect = 1.540e-11 Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 61 PEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
P+DV+VV +RTAI RAK+G+FKDTTPD LL+ V+ AVL G++P+++G+V
Sbjct: 40 PDDVVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMTAVLTDVGLSPAELGDV 91
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A8J5XCH5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCH5_DIALT) HSP 1 Score: 67.8 bits (164), Expect = 1.980e-11 Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 55 ESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
+SP+DV+++ V RT I RAK+GAFKDTTPDVLLA L + R GV DVG++
Sbjct: 30 QSPDDVVILSVARTPIGRAKRGAFKDTTPDVLLAHALRGAIERAGVRAEDVGDI 83
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A2D4CJ66_PYTIN (3-ketoacyl-CoA thiolase A n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ66_PYTIN) HSP 1 Score: 65.9 bits (159), Expect = 2.070e-11 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 64 EDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
+DV+VV +RT IT+AK+G FKDTTPDVLL VL AVL +T V+P VG++
Sbjct: 27 DDVVVVSALRTPITKAKRGGFKDTTPDVLLGHVLQAVLTQTKVDPKRVGDI 77
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: K3X1S5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1S5_GLOUD) HSP 1 Score: 66.6 bits (161), Expect = 5.080e-11 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 28 QTNTLAGVPESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
Q N A P EDV++V +RT IT+AK+G FKDTTPDVLL VL AVL + V+P VG++
Sbjct: 12 QQNKPATAPVVDEDVVIVSALRTPITKAKRGGFKDTTPDVLLGHVLQAVLKQAKVDPKLVGDI 74
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A7S0PE83_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PE83_CAFRO) HSP 1 Score: 66.2 bits (160), Expect = 5.990e-11 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 HVSAAVAAG----QTNTLAGVPESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
H+ +A A+G ++ T AG P S +DV+++ +RT I +A++GAFKDTTPDVLLA VL +R+GV +G++
Sbjct: 32 HLGSAAASGPSRAKSTTQAGAPPSFDDVLIIAAVRTPIGKARRGAFKDTTPDVLLATVLKEAQSRSGVPMHAIGDI 107
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Match: A0A4P9ZNT3_9FUNG (Thiolase, N-terminal domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZNT3_9FUNG) HSP 1 Score: 66.2 bits (160), Expect = 6.980e-11 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 55 ESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLLAEVLGAVLARTGVNPSDVGEV 216
+S EDV++V +RT ITRA++GAFKDT P+ LLAEVL A LART ++P+ V +V
Sbjct: 29 KSDEDVVIVSALRTPITRARRGAFKDTPPEDLLAEVLKATLARTAIDPAMVDDV 82 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58791.13377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58791.13377.1 >prot_H-elongata_contig58791.13377.1 ID=prot_H-elongata_contig58791.13377.1|Name=mRNA_H-elongata_contig58791.13377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp HVSAAVAAGQTNTLAGVPESPEDVMVVDVIRTAITRAKKGAFKDTTPDVLback to top mRNA from alignment at H-elongata_contig58791:46..635- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58791.13377.1 ID=mRNA_H-elongata_contig58791.13377.1|Name=mRNA_H-elongata_contig58791.13377.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=590bp|location=Sequence derived from alignment at H-elongata_contig58791:46..635- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58791:46..635- >mRNA_H-elongata_contig58791.13377.1 ID=mRNA_H-elongata_contig58791.13377.1|Name=mRNA_H-elongata_contig58791.13377.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at H-elongata_contig58791:46..635- (Himanthalia elongata Himel1 dioecious)back to top |