mRNA_H-elongata_contig5877.13370.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5877.13370.1
Unique NamemRNA_H-elongata_contig5877.13370.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ0_ECTSI)

HSP 1 Score: 658 bits (1697), Expect = 1.440e-217
Identity = 442/932 (47.42%), Postives = 535/932 (57.40%), Query Frame = 1
Query:    1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGD----------QTG--GIV---SAKSPRGISRG----------------TCVAYDPDTKTPTTFGSAKD-----SKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNG-SKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGS----AASTEAVERTPLA----DRSVHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
            +++P  LAM  VVAFSS LDVAAIE+ M KPLDFN EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAGVDTR+A ATS + LV  AASPA++IS+ P+ FFG+LLVLIAVDLMVEWLW+AR+RMM AEY+VCLAT+ +IQA G+EKG++VG VLAAL FT+TYAQ         VP VM  R+KAS VMRTFEERVIL+AH++QTV    QGYIFFGSA +IL+DVK+ I+WG D           TG  G V   S  S R +                         P  +  T  G+        S   N +G +  ++S   A + P   +   +  +  S    G S  G +     +L+ +R         +T +   +G      +  G     A+  +  E+ PLA      S H    GGA  +       G  YGA+++G                       R R  S   E R G     +GAVQ YM  WANGGGS  D P +               R  RS S  SLLP  E+RTRRV+LDFSNVVGVDATAARSCFLMLK+VL+ S V VVFSG   K+QALLRSHGVI D+DPVF+SLDTALEW EE +L                                                                               EG+G +     A A   + E A FLGDHE YY RA +LRRRSS   + + +G +N LV VGDVGSLQ ILEDYLEVDRY+ PESV SVL EA+ FFR+EHV AG V+ D   P      P+K++FIG+GSVELQI GE G  +R  KVC+GGTFGEVGF+L+TP+AFRA+AREPCHLHTLDR GM  MQ +NPGLC+LVQ AV+KSICLA S+S+ESAH GPVD
Sbjct:  284 RIVPKLLAMIVVVAFSSCLDVAAIEIEMAKPLDFNGELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRVASATSFVMLVGVAASPASVISFPPRCFFGALLVLIAVDLMVEWLWQARVRMMPAEYLVCLATYGSIQAWGVEKGLVVGLVLAALGFTVTYAQ---------VPAVMKTRVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVQILSDVKDGIVWGTDLPATPNAGAPATGIFGNVYDDSNHSTRSVGHPXXXXXXXXXXXXTYLKAAAHVKPSGEGTTAVGAMSPCGDILSPVFNRSGAVYRSSSATAAVAAPSSVLPGPSPMSTSSQQQGGASPQGRSSPLAQSLARTRSAGGTTTTTSTGVYGADGGRGRLFHRAGGLLPGASEHQQAEQEPLAVLANASSRHDGGSGGANFSVPTRETTG--YGAMEEGGAGGXXXXXXXXXXXXTAGVRVRRLRGASLGEEPRVG-----EGAVQEYMSPWANGGGSFVDCPGLTGRTGGGDSSPSFSGRGARSPSVASLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKVVLKTSGVHVVFSGTTRKVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-------EGEG-EQGRPAAAAPEAEAEAAVFLGDHEDYYLRAGTLRRRSSFSTQISDRGLDNPLV-VGDVGSLQFILEDYLEVDRYQAPESVRSVLGEAKSFFRREHVVAGAVLADYGSPSSSPSSPEKVYFIGSGSVELQIPGECG-PRRLQKVCAGGTFGEVGFFLRTPEAFRAVAREPCHLHTLDRAGMVAMQHQNPGLCILVQKAVMKSICLAKSLSIESAHLGPVD 1189          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A6H5KE91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE91_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 9.550e-164
Identity = 360/843 (42.70%), Postives = 441/843 (52.31%), Query Frame = 1
Query:  376 MMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKD------------------------SKCLNGNGDL---------------------------------------PIAASGPRAASKPMESISEST---LFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVG-----SAASTEAVERTPLADRSVHISDCGGAAGAS-AVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATG----RPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTAR------GTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPP------DKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
            MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ         VPTVMTAR+KAS VMRTFEERVIL+AH++QTV    QGYIFFGSA KIL+DVK+RI+WG D      +     G+       YD   ++  T G+ +                         +  +N  GD+                                        +  S PR    P E+ S+S      T        S  G++     +L+ +R         +T +    G      +  G     ++   E  ++ P    +      GG+ GA+ +V       YGA+++G         G  GV     GATG      R  S   E  G G   +GAVQ YM LWANGGGS  DSP +               R  RS S  SLLP  E+RTRRV+LDFSNVVGVDATAARSCFLMLKIVLR S V+VVFSGA  ++QALLRSHGVI D+DPVF+SLDTALEW EE +L                                                              G    GS+NE   G  G P                   + + E A FLGDHE YY RA +LRR+SS   + + +  +N LV VGDVGSLQ ILEDYLEVDRY+ PE V SVL EA+ FFRQEHV AG V+ D   P       +K++FIG+GSVELQI G+ G  +R  KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTLDR GMA MQ +NPGLC+LVQ AV+KSICLAAS+S+ESAH GPVD
Sbjct:    1 MMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPYTGAPATGLYGNV---YDDSNRSTRTVGNPQKQLQQQQSYLETAALFKPSGEGTIAASAMNPRGDILSPVFNRSGAVYRSSSXXXXXXXXXXXXXXXXXXXXXXXVLPGSSPRRWRSPREARSQSLREHTSTSXXXXXXXSSQGISSPLAQSLARTRSVGGTTTTXSTGIPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANGSSRHDGGSGGANFSVPTRETTGYGAMEEG------GAGGDGGVXXXXGGATGVRVRHSRGASLG-EEQGVG---EGAVQAYMSLWANGGGSFADSPGLTGMTGGGDSSPGFSGRMARSCSVASLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKIVLRTSGVDVVFSGATREVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLAGSENEKGEGEEGRP--------------ATAVPSPEAEAAVFLGDHEDYYLRAGTLRRQSSFRTQISDRALDNPLV-VGDVGSLQSILEDYLEVDRYQAPEGVRSVLGEAKSFFRQEHVAAGAVLADNGNPSSASSSAEKVYFIGSGSVELQIPGKYG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLDRAGMAAMQHQNPGLCILVQKAVMKSICLAASLSIESAHLGPVD 805          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D7FMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW9_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 6.730e-136
Identity = 327/763 (42.86%), Postives = 399/763 (52.29%), Query Frame = 1
Query:  376 MMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTVQGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQF-LATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHISDCGGAAGAS-AVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATG----RPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
            MM AEY+VCLAT+ +IQA G+EKG++VG VLAAL FT+TYAQ         VPTVM AR+KAS VMRTFEERVIL+AH++Q V   +         A V        +  G I+S    R     +   Y   + T                        G  A+S+ + S    +L   RS  + G+  G+         P  GG     F  A  L          +         E   +  LA+ S      GG  GA  +V       Y A+++G       G            A G    RPR  S   E+       +GAVQ YM LWANGGGS  DSP +               R  R  S VSLLP  E+RTRRV+LDFSNVVGVDATAARSCFLMLKIV+R S V VVF+GA   +QALLRSHGVI D+DPVF+SLDTALEW EE +L     D                                        L    +LTA+      ++   +GGG   P +    +G         A     E   FL DH   Y  A +LRRR+S   + + +  +N LV VGDVGSLQ ILEDYLEVDRY  PESV SV  EA+ FFRQEHV AG V++D   P      P+K++FIG+GSVE QI GE G  +R  KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTL+R GM  MQ +NPGLC+LVQ AV+KSICLA S+S+ESAH  PVD
Sbjct:    1 MMPAEYLVCLATYGSIQAWGVEKGLVVGLVLAALGFTVTYAQ---------VPTVMKARVKASTVMRTFEERVILKAHQEQAVVLELQPSGEGTTAAGVI-------NPRGDILSPVFNR-----SGAVYRSSSATAXXXXXXXXXXXXXPMWTXXXXXGG--ASSQGISSPLAHSLARTRS--VGGTCTGV---------PGAGGGRGRPFHRAGGL----------LPGASERLEAEQESQAVLANDSTRHD--GGRGGAHFSVPAQETTDYEAMEEGGA----GGDXXXXXXXXXXAAVGVRARRPRGASLGEEQR----VGEGAVQEYMSLWANGGGSFVDSPGLTGRTGGGDSSPGFSGRETRCPSVVSLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKIVMRTSGVHVVFAGATRTVQALLRSHGVITDDDPVFNSLDTALEWSEEMML-----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----ALTAQAQGRHAAEEPAEGGGGLPPVESKNEEGEGEQGRPGAAPPSPAEAVVFLEDH---YLSAGTLRRRNSFRTQISDRALDNPLV-VGDVGSLQFILEDYLEVDRYHAPESVRSVFGEAKSFFRQEHVAAGAVLVDHDSPSSSSSSPEKVYFIGSGSVEPQIPGECG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLNRAGMVAMQHQNPGLCILVQKAVMKSICLAKSLSIESAHLRPVD 695          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ2_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ2_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.600e-111
Identity = 260/574 (45.30%), Postives = 328/574 (57.14%), Query Frame = 1
Query:    1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSK--------------------CLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKD----------GLNLRSEATLSPSRGGRFNGQFLATKLSQD-------NGSGSWSMNNV-------------------GSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLR-YGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNV 1494
            +V+PN LAM  VVAFSS LD+AAIEM M KPLDFN+EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAGVDTR A A S + L+A AASPA++IS+LP+ FFGSLL+L+AVDLMVEWLW+ARL+MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ         VPTVMTAR+KAS VMRTFEERVIL+AH++QTV    QGYIFFGSA KIL+DVK+RI+WG D      +     GI       YD    +  T G+ +  +                     +N  GD+         A+    S + +      SS L GS              +LR   + S  + G  + Q +++ L+Q         G+ + +   V                   G++   E  ++ P    +      GG+ GA+    AR    YGA+++G    +  G G SG     +    RPR  S   E R G     +GAVQ YM LWANGGGS+ DSP +               R  RSSS VSLLP  ++RTRRV+LDFSNV
Sbjct:  297 RVVPNLLAMIVVVAFSSCLDIAAIEMEMAKPLDFNEELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRAASAVSFVMLLAVAASPASVISFLPRCFFGSLLILVAVDLMVEWLWQARLKMMPAEYLVCLATFSSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNV---YDDSNLSTRTVGNPQQQQSYLETAALVKPSSEGIIAAGAMNPRGDILSPVFNKSGAAYRSSSATAAAEAPAASSVLPGSSPLHWRSPRQARRQSLREHTSTSSQQQGGASSQGISSPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANASSRHYGGSGGANFSVPARETTGYGAMEEGGAGGD-GGVGSSGRATAGVRVR-RPRGTSLGEEPRVG-----EGAVQAYMSLWANGGGSLADSPGLTGMTGGGDSSPGFSGRMARSSSVVSLLPASDERTRRVILDFSNV 851          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ4_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ4_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 6.930e-98
Identity = 249/572 (43.53%), Postives = 311/572 (54.37%), Query Frame = 1
Query:    1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISE--STLFTRR------------------------SSPLNGSKDGLN--LRSEATLSPSRGGRFNGQFLATKLSQD-------NGSGSWSMNNV-------------------GSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLR-YGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNV 1494
            +V+PN LAM  VVAFSS LD+AAIEM M KPLDFN EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAG                      ++IS+LP+ FFGSLL+LIAVDLMVEWLW+ARL+MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ         VPTVMTAR+KAS VMRTFEERVIL+AH++QTV    QGYIFFGSA KIL+DVK+RI+WG D      +     GI       YD    +  T G+ +  +       L   +S    A+  M    +  S +F R                         SSPL+      +  LR   + S  + G  + Q +++ L+Q         G+ + +   V                   G++   E  ++ P    +      GG+ GA+    AR    YGA+++G    +  G G SG     +    RPR  S   E R G     +GAVQ YM LWANGGGS  DSP +               R  RSSS VSLLP  E+RTRRV+LDFSNV
Sbjct:  284 RVVPNLLAMIVVVAFSSCLDIAAIEMEMAKPLDFNGELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAG----------------------SVISFLPRCFFGSLLILIAVDLMVEWLWQARLKMMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNV---YDDSNHSTRTVGNPQQQQSYLETAALVKPSSEGTIAAGAMNPRGDILSPVFNRSGAVYRSSSXXXXXXXXXXXSVLPGSSPLHWRSPARSQSLREHTSTSSQQQGEPSSQGISSPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANESSRHDGGSGGANFSVPARETTGYGAMEEGGAGGD-GGVGSSGRATAGVRVR-RPRGTSLGEEPRVG-----EGAVQAYMSLWANGGGSFADSPGLTGMTGGGDSSPGFSGRMARSSSVVSLLPASEERTRRVILDFSNV 814          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ3_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ3_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 5.680e-95
Identity = 186/357 (52.10%), Postives = 217/357 (60.78%), Query Frame = 1
Query: 1534 MLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
            MLKIVLR S  +VVFSGA  K+QALLRSHGVI D+DPVF+SLDTALEW EE +L                                                                               EG+G +     A A   + ETA FLGDHE YY RA +LRRRSS   + + +  +N LV VGDVGSLQ ILEDYLEVDRY+ PESV SVL EA+ FFRQE V AG V+ D   P      P+K++FIG+GSVELQI G+ G  +R  KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTLDR GMA MQ +NPGLC+LVQ AV+KSICLAAS+S+ESAH GPVD
Sbjct:    1 MLKIVLRTSGADVVFSGATRKVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-------EGEG-EQGRPAAAAPEAEAETAVFLGDHEDYYLRAGTLRRRSSFSTQISDRALDNPLV-VGDVGSLQSILEDYLEVDRYQAPESVRSVLGEAKSFFRQERVAAGAVLADHGNPSSSSSSPEKVYFIGSGSVELQIPGKCG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLDRTGMAAMQHQNPGLCILVQKAVMKSICLAASLSIESAHLGPVD 347          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A7R9UBE4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE4_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.580e-91
Identity = 300/933 (32.15%), Postives = 422/933 (45.23%), Query Frame = 1
Query:    1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQ------TVQGYIFFGSAAKILADVKERIIW--GGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTR---RSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSM-------NNVGSAASTEAVERTPLADRSVHISDCGGAAGASAVTHA---------RGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADN-DPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLR------EARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVEL-----------------------------------QIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVDKS 2592
            ++IP+++AM  VVAFSSSLDVAAIEM +G+ LD+N+EL TVG SN +SGLTGG+TGSYIFSQTIFN+R GV +R+ G       +   A P + ++Y+PK FFGSLL +IAVDL  EWL  AR +M RAEY V +ATFVA+ ACG+E G+++G VLA   FT+ YAQ         VP V ++  + S + RTF+ERVIL            ++QGYIFFGSA  +LADVK RI W  GG  + GI    SP  + +   V   P   T  T G                A +G          I+   ++ R   + SP    +      SE  LS   G R          S  +GSG WS         + G  AS +   R P +    HI+  GGAAG +              RG +YG        R  +G+  S V+       GR  E S  +  +  G  ++    +       G GS T S +                       V+LDF  V G+DATAAR+CFL+L+ +LR + V+VV++     ++ LL +HGVI ++ DPVF+ ++ ALEW EEK+L    T   LR++                  + S ++  P L+L       + +       +  +   D      PG D  G G   +   A AS ++        D E+ Y    S     S D    S  G            L+ IL DY+  +      SV+  L+         ++F  E      V+  +    D+L+ +  G VEL                                   +I   +   +R  K+  GG  GEVGF+L  PQ FRA+ R PC L  + R   A+M R  P L +++Q + L   CL  + ++   H  P + S
Sbjct:  269 QIIPHWIAMFLVVAFSSSLDVAAIEMELGESLDYNRELMTVGISNFLSGLTGGYTGSYIFSQTIFNLRVGVQSRITGYIITGVELIIFAVPFSAVAYVPKCFFGSLLTMIAVDLCYEWLILARHKMARAEYFVNIATFVAVNACGVELGMVIGIVLAMACFTLAYAQ---------VPGVKSSFRRTSLITRTFQERVILDTAMHDGIMQIFSLQGYIFFGSAVNLLADVKSRIRWPDGGPASLGIERVDSPPTVPK---VPSSPSLYTEPTDGK--------------FATAG----------IAAMPVYNRGGGKGSPSKAGRMHERRMSERDLSEEHGER-----RRLPRSSSHGSGFWSFMSPSTWDRDGGDQASNDKHHR-PESRMDAHIASWGGAAGQAMSERTPLLASRAAQRGSKYGPSGSPASRRRTNGSSQSRVM-----TNGRVDEESPSFNGARVGLEIESNASSDDVARTVGLGSSTTSVKAW---------------------VILDFEKVKGIDATAARACFLILRKLLRTAGVQVVYAAVPDHVKLLLEAHGVINESEDPVFEQVEEALEWCEEKLL----TVDGLRYQASSSAL------------ALSTSTSAPDLTL-----FKDKVRNLRLHRLHQRLSEDDPWMSRPGHDPRGSG---EAPYAAASVKE--------DIEEKYGMDRS---HPSSDDLFLSGSGRT-------WEDLRAILFDYIVENVDHELSSVFRGLKYELTEDALTKYFSTEIAPKNKVLFRRGEASDRLYVLRQGEVELLAPMTVEGSTPANGSPNSGRPPDANGTDAMEHRPLKIPISVSKERRIQKITDGGVCGEVGFFLCRPQDFRAVTRTPCQLWNMTRNDFAEMCRNRPTLALMLQVSALHR-CLNCARALRQTHRSPPNPS 1090          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A7S1UB31_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB31_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.650e-86
Identity = 295/915 (32.24%), Postives = 422/915 (46.12%), Query Frame = 1
Query:    1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQ--AHRQQT----VQGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGI--------SRGTCVAYDPDTKTPTTFGSAKDSKCLNGN------GDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSP----SRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMG----ATGRPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQR--------TRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIAD-NDPVFDSLDTALEWLEEKILKERKTDT---------LLRHRRVVGGTGDSGNR---RPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAA-FLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYL------EVDRYKVPESVYSVLREA--RRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQIIGELGYS-------KRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAAS 2550
            ++  N++AM  VVAFSSSLDVAAIEM +G PLD+N+EL TVG SN  SGL+GG+TGSYIFSQTIFN+R GV +R+ G       +   A P ++++Y+PK FFGSLL LI VDL  EWL EAR +M   EY VC+ATFVA+   G+E G+LVG VLA  +FT  YA+         +PTV T   + S   RTF+ER+IL    H  Q     +QGYIFFGSA  +LADVKER+       G +   +S R +        S     A DP      T  +A       GN      G   +      +   P  ++ +  +     SP               ++P    +RGG   GQ L+ + S   GSG    N   S  + +  E TPL               + A+  A+G  +         RE S        P+ +G      GR +       R+ +GST  G+      +     G     PEM       SAV+                   V+LDF  V GVDATAAR+CFL+L+ +L++S V++V++     +  LL +HGVI +  DP+FD+L+ ALEW EE++L   + D+         L + +  V       N+   R  RR     + D P          WE L  R         E D                  +   A  +   +E AA  L  H             SS +   + K              L+ +L +Y+      EV R  V +++ S L E   +++F  + V+ G+ +  +      L+ +  G VEL +  + G         +R  K+  GG  GEVGF+L  PQ FRA++R  C +  + RE +AKM ++NP L +L+Q+A+L+S+ L+ S
Sbjct:  269 RIFVNWIAMFFVVAFSSSLDVAAIEMELGTPLDYNQELMTVGISNFCSGLSGGYTGSYIFSQTIFNLRVGVRSRITGFIIAGIEMVVFALPFSVVAYVPKCFFGSLLTLICVDLCYEWLIEARHKMAATEYFVCIATFVAVNIMGVEGGMLVGIVLAMATFTFGYAR---------LPTVKTNIKRNSLTTRTFQERIILDKATHEGQMQIFQLQGYIFFGSAVNLLADVKERVRLPDRNIGSVRPTQSFRPLRQRDRSYSSPNLDAAVDPKNVHAQTEVAAMPVYNRGGNLHYEEGGSPNLRRMRSNSFGSPQRALKQQNMLIPGGSPT------------TNVAPMPIYNRGG---GQPLSNRTSPS-GSGVRGRNRSYSFGTMK--ESTPLLS-------------SGALGEAQGFTH--------SREVSEDSSPIFSPMQLGLDLMGLGRRQGSEASRSRTESGSTAMGSPNPKRAIMDLESG----IPEME-----VSAVNGFSHKSSMGDDDGIGIKSWVILDFEKVSGVDATAARACFLVLRKLLQKSGVQLVYAAVPDHVMLLLNAHGVIDEAEDPLFDTLEEALEWCEERLLALSEGDSGSSSHMPGHLRKAKSSVPDLTAYKNKVQGRRLRRLRKRLSQDDP----------WEPLKTR---------EED------------------EPEDASLNVIAIEGAAPELEGHP------------SSDELFLSGKDASWK--------DLRVLLYEYINEGSDGEVGR--VMKNLRSELNETMLKKYFEVKIVEEGITLFQRGEASSCLYILRQGEVELLMCDDAGTGDGVAVKERRIQKISDGGVAGEVGFFLCRPQDFRAVSRTHCQMWYMTRESLAKMCQKNPTLAMLLQHAILRSLSLSIS 1067          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: W7TKR3_9STRA (Sulfate permease family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKR3_9STRA)

HSP 1 Score: 295 bits (754), Expect = 4.120e-82
Identity = 269/884 (30.43%), Postives = 390/884 (44.12%), Query Frame = 1
Query:    7 IPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHI--SDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWERSGA-GSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLG--DHEKYYSRAESLRRRSSMDARTASKGGENN--LVPVGDVGSLQCILEDYLEVD--------------RYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQI--------IGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISM 2559
            +P+++A+T VVAFSSSLDV AIEM   +PL+++ EL+ +G SN++SGLTGGFTGSYIFSQTIFN+R G+ TR+  AT       A   P ++I+++P+ FFG LLVLI  DLM+EWLW +R +MM  EY V +ATF+AIQ   +E G+ VG VLA ++FT++YA+A         P V+  R++ S V+RTFEER IL A+  + +    +GY+FFGSA KIL ++KE ++      G  +S +    +S       + +       GS  D                 R+ S+              SS L+ +      R + T S    G    + +   L +      WS N                 DR V    +DC            R    G +   DR+   +    S   P P  A    R+VSF    + A GSTV                                       P+ R R ++ DFS VVG+DATAARSCFLMLK +L+ + + ++F+     I+ LLR HGV+ + D VFDS+D ALE+ EE++L+                                                                                            SA ++  A  LG   H  +Y+      RRS   +R A K    +  L        L+ IL DYLEV                 KV    + VL +   +F +     G  +       DKL+FI  G +EL+         +G+    +R  K+ +GGT GE+GF+LK PQ F A+A  PC ++ L R  + ++ ++N  L  ++  AV+KSI LA+S ++
Sbjct:  324 VPSWVALTLVVAFSSSLDVTAIEMEKKQPLEYDYELQMIGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEA---------PVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVL-----AGHAMSRRQQARVSEQERNEMEVEEHR----GSTTD-----------------RSHSR------------TSSSSLSAALAAAEFRGDGTKS--HVGNQRSELVDFYLRE------WSEN-----------------DRHVEFGQADC------------RSCSRGRI---DRDSRMATVAPSLPCPPPSSA----RKVSFSSSPAQASGSTV---------------------------------------PQNRIRWLIFDFSQVVGIDATAARSCFLMLKSLLKGAHIRLIFASPGPVIERLLRGHGVLDEEDSVFDSVDEALEYCEEELLQ--------------------------------------------------------------------------------------------SAAELSDADLLGLSRHPSFYAAV----RRSRRLSRRAPKCSRRDKLLFEAQKALDLESILADYLEVAVEEGIDTDDGEEGADAKVNHQPHRVLAQ---YFEEASFQPGECLFAGGEASDKLYFIRKGVIELRAPTISDNRGLGQW-QQQRLQKISAGGTVGELGFFLKRPQIFTAMATTPCVVYCLTRPRLVELAKDNSKLACVLIFAVIKSIALASSYAI 977          
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A4D9DC98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC98_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.170e-73
Identity = 299/1101 (27.16%), Postives = 437/1101 (39.69%), Query Frame = 1
Query:    7 IPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWG---GDQTGGIVSAKSPRGISRGTCVAYDPD---TKTPTTFGSAKDSKCLNGNGDLP-------------IAASGPRAASKPMESISESTLFTRRSSP------------------LNGSKD----------GLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVER--TPLADRS-VHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGT----GMSGVVPIPMGATGRPRE-----------------------------------------------------VSFDW--------------------------------------------ERSGA------GSTVDGA----------------------------------VQTYMPLWANGGGSVT---------DSPEMNRYRRSSSAVSLLPRP-----------------------EQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLG--DHEKYYSRAESLRRRSSMDARTASKGGENN--LVPVGDVGSLQCILEDYLEV-----------DRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQI--------IGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISM 2559
            +P+++A+T VVAFSSSLDV AIEM   +PL+++ EL+ +G SN++SGLTGGFTGSYIFSQTIFN+R G+ TR+  AT       A   P ++I+++P+ FFG LLVLI  DLM+EWLW +R +MM  EY V +ATF+AIQ   +E G+ VG VLA ++FT++YA+A         P V+  R++ S V+RTFEER IL A+  + +    +GY+FFGSA KIL ++KE ++ G   G    G    +       G      PD      P  F S   +    G+G+               IAAS P    +P   +      T R  P                  +NG ++          G     + T S S  G F G      +SQ NG        +G A+++  V    TP+  R  V +   G A+  SA++  R      + +G+   E+  T    G  G+      A GRPRE                                                     VS+D                                             ERS        GST D +                                  V  Y+  W+     V              ++R  R ++    LP P                       + R R ++ DFS VVG+DATAARSCFLMLK +L+ + + ++F+     I+ LLR HGV+ + D VFDS+D ALE+ EE++L+                                                                                            SA ++  A  +G   H  +Y+      RRS   +R A K    +  L        L+ IL DYLEV           +R    +  +   R   ++F +     G  +       DKL+FI  G +EL+         +G+    +R  K+ +GGT GE+GF+LK PQ F A+A  PC ++ L R  + ++ ++N  L  ++  AV+KSI LA+S ++
Sbjct:  296 VPSWVALTLVVAFSSSLDVTAIEMEKKQPLEYDYELQMIGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEA---------PVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVLAGHASGLPETGEREEEEEAEADIGGEGGVGPDGAEAMGPLPFSSTSAAMLFRGSGERTGPKARRERQGKSSIAASAPPCTGRPNPFLGR-VRSTPRLVPDVVGRDRNEAKPVGEFPVVNGKREKGGRDAEEGPGHTKPQQLTSSASGRGGFPGI-----VSQSNGRSLGGSGPIGEASASSCVPDVLTPVYHRGGVWVETKGNASSGSALSWRRDSAEEELGEGEDSEEEDWTMRDEGCQGLNEPHESARGRPREEARDRSGPWMCGREMGRDSPLQDEIGSEAAPLLSCDHSHVSQHHAPSQCSGMAVSYDTAQDFMDSLENFLSPSAESSPDATSRSAPSSPAVSRRQQARVSEQERSEMELEEHRGSTTDRSHSRTSSSSLSAALAAAECRGDGTKSHVGNQSSELVDFYLREWSEDDRHVEFGQADCRSCSRGSIDRESRMATVAPSLPCPPPSSARKVSFPSSPAQASGSTVPQNRIRWLIFDFSQVVGIDATAARSCFLMLKSLLKGAHIRLIFASPGPVIERLLRGHGVLDEEDSVFDSVDEALEYCEEELLQ--------------------------------------------------------------------------------------------SAAELSDADLIGLSRHPSFYAAV----RRSRRLSRRAPKCSRRDKLLFEAQKALDLESILADYLEVAVEEGIDTDDGERGADAKVNHQPHRVLAQYFEEASFQPGECLFAGGEASDKLYFIRKGVIELRAPTISDNRGLGQR-QQQRLQKISAGGTVGELGFFLKRPQIFTAMATTPCVVYFLTRPRLVELAKDNSKLACVLIFAVIKSIALASSYAI 1284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSJ0_ECTSI1.440e-21747.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE91_9PHAE9.550e-16442.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMW9_ECTSI6.730e-13642.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSJ2_ECTSI1.600e-11145.30Sulfate_transp domain-containing protein n=1 Tax=E... [more]
D8LSJ4_ECTSI6.930e-9843.53Sulfate_transp domain-containing protein n=1 Tax=E... [more]
D8LSJ3_ECTSI5.680e-9552.10Cyclic nucleotide-binding domain-containing protei... [more]
A0A7R9UBE4_9STRA1.580e-9132.15Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UB31_9STRA2.650e-8632.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TKR3_9STRA4.120e-8230.43Sulfate permease family n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DC98_9STRA2.170e-7327.16Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5877contigH-elongata_contig5877:521..10620 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score655.6
Seed ortholog evalue3.2e-185
Seed eggNOG ortholog2880.D8LSJ0
KEGG koko:K03321
KEGG TC2.A.53.3
EggNOG free text desc.secondary active sulfate transmembrane transporter activity
EggNOG OGsCOG0659@1,KOG0236@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal peptide
Exons13
Model size2616
Cds size2592
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5877.13370.1prot_H-elongata_contig5877.13370.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5877 545..10620 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930952.6583457-UTR-H-elongata_contig5877:520..5441622930952.6583457-UTR-H-elongata_contig5877:520..544Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5877 521..544 +
1691679638.2916481-UTR-H-elongata_contig5877:520..5441691679638.2916481-UTR-H-elongata_contig5877:520..544Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5877 521..544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930952.6852267-CDS-H-elongata_contig5877:544..6401622930952.6852267-CDS-H-elongata_contig5877:544..640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 545..640 +
1691679638.3030176-CDS-H-elongata_contig5877:544..6401691679638.3030176-CDS-H-elongata_contig5877:544..640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 545..640 +
1622930952.70402-CDS-H-elongata_contig5877:1067..11551622930952.70402-CDS-H-elongata_contig5877:1067..1155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 1068..1155 +
1691679638.312477-CDS-H-elongata_contig5877:1067..11551691679638.312477-CDS-H-elongata_contig5877:1067..1155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 1068..1155 +
1622930952.7472162-CDS-H-elongata_contig5877:1677..18431622930952.7472162-CDS-H-elongata_contig5877:1677..1843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 1678..1843 +
1691679638.3221154-CDS-H-elongata_contig5877:1677..18431691679638.3221154-CDS-H-elongata_contig5877:1677..1843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 1678..1843 +
1622930952.7698543-CDS-H-elongata_contig5877:2548..26971622930952.7698543-CDS-H-elongata_contig5877:2548..2697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 2549..2697 +
1691679638.3405411-CDS-H-elongata_contig5877:2548..26971691679638.3405411-CDS-H-elongata_contig5877:2548..2697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 2549..2697 +
1622930952.7850447-CDS-H-elongata_contig5877:3363..34641622930952.7850447-CDS-H-elongata_contig5877:3363..3464Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 3364..3464 +
1691679638.355112-CDS-H-elongata_contig5877:3363..34641691679638.355112-CDS-H-elongata_contig5877:3363..3464Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 3364..3464 +
1622930952.800822-CDS-H-elongata_contig5877:3956..46911622930952.800822-CDS-H-elongata_contig5877:3956..4691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 3957..4691 +
1691679638.3733833-CDS-H-elongata_contig5877:3956..46911691679638.3733833-CDS-H-elongata_contig5877:3956..4691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 3957..4691 +
1622930952.8145287-CDS-H-elongata_contig5877:6513..66481622930952.8145287-CDS-H-elongata_contig5877:6513..6648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 6514..6648 +
1691679638.3998356-CDS-H-elongata_contig5877:6513..66481691679638.3998356-CDS-H-elongata_contig5877:6513..6648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 6514..6648 +
1622930952.8367403-CDS-H-elongata_contig5877:7061..72221622930952.8367403-CDS-H-elongata_contig5877:7061..7222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 7062..7222 +
1691679638.4121711-CDS-H-elongata_contig5877:7061..72221691679638.4121711-CDS-H-elongata_contig5877:7061..7222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 7062..7222 +
1622930952.8569179-CDS-H-elongata_contig5877:7634..80651622930952.8569179-CDS-H-elongata_contig5877:7634..8065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 7635..8065 +
1691679638.421455-CDS-H-elongata_contig5877:7634..80651691679638.421455-CDS-H-elongata_contig5877:7634..8065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 7635..8065 +
1622930952.8741994-CDS-H-elongata_contig5877:8427..85131622930952.8741994-CDS-H-elongata_contig5877:8427..8513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 8428..8513 +
1691679638.4300346-CDS-H-elongata_contig5877:8427..85131691679638.4300346-CDS-H-elongata_contig5877:8427..8513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 8428..8513 +
1622930952.8908482-CDS-H-elongata_contig5877:8895..90391622930952.8908482-CDS-H-elongata_contig5877:8895..9039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 8896..9039 +
1691679638.4381673-CDS-H-elongata_contig5877:8895..90391691679638.4381673-CDS-H-elongata_contig5877:8895..9039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 8896..9039 +
1622930952.9071915-CDS-H-elongata_contig5877:9544..97091622930952.9071915-CDS-H-elongata_contig5877:9544..9709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 9545..9709 +
1691679638.4472554-CDS-H-elongata_contig5877:9544..97091691679638.4472554-CDS-H-elongata_contig5877:9544..9709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 9545..9709 +
1622930952.9261658-CDS-H-elongata_contig5877:10485..106201622930952.9261658-CDS-H-elongata_contig5877:10485..10620Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 10486..10620 +
1691679638.456347-CDS-H-elongata_contig5877:10485..106201691679638.456347-CDS-H-elongata_contig5877:10485..10620Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5877 10486..10620 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5877.13370.1

>prot_H-elongata_contig5877.13370.1 ID=prot_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=864bp
MTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSY
IFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLV
LIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAA
LSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV
QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPD
TKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSS
PLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGS
AASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLRYGAVQDGDRERE
KSGTGMSGVVPIPMGATGRPREVSFDWERSGAGSTVDGAVQTYMPLWANG
GGSVTDSPEMNRYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARS
CFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALE
WLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSL
PWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALA
SARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVG
SLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPP
DKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAI
AREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHF
GPVDKSGAADRLT*
back to top

mRNA from alignment at H-elongata_contig5877:521..10620+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5877.13370.1 ID=mRNA_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=10100bp|location=Sequence derived from alignment at H-elongata_contig5877:521..10620+ (Himanthalia elongata Himel1 dioecious)
AAGGTTATTCCGAATTTCCTGGCGATGACCGCCGTCGTGGCCTTCTCGAG CTCCCTGGACGTGGCCGCCATCGAGATGGGTATGGGGAAGCCGCTGGACT TCAACAAGGAACTCAAGACTGTGCGTGCGCGATAGAGCTCCCTTTTCTTT CGTTTTCTTTTGTTTTTTTCCCTTTTGTCCCCCCTCTGTTCTTGTTGGAG GGGCTTGATTGTCTTGTTTTCTGTCTGGTTGTTTTCCAAAAACTACAAAA AGGGTATATACCCGATACGTGCTTCGGCGACACGTATCGCCTAGTGTAGG TAGTTCTTCGAAAGCGCTTTATCTCCATTTTCCGTTCTTGTTTTCTCTCC ATATCCCTTTTTATGTATTTTTTCTGTATCGCTTGCGGCAAAATTATTGT CATGATACTCTGACGAGAAACCTTGGTGCTGATTGCGCAGCCAGTTTTAC GAAAATGTTCTCAAAATCGACTTATCTCTGCCTTCATGCTCGAGTTGCCC TCCCTTTATCCCTTAATAACGCCCCCTCCCCCTCACGTCTCCGCCAGGTG GGTTGGTCGAACGTAATATCGGGGCTTACAGGTGGATTCACTGGCAGCTA CATCTTCAGCCAGACGATATTTAATATGCGCGCAGGTATCAGTACTTCTA TAAAAGTGTCTTCTCGTCGGCTCGCCCTCATGGGATTGGTTTTTCCGATG GCCTCCATAGACGGATCTCATCGCTCTCCGCGCATGCTTTGTAGCAACGC CTCTTCGCCATTATTTGCCTTACCCCCGGGGAGGCATATGTCTTCATCTT GCTCCGTTTTTTTGTTCTTGTTTTTTGTTTTTGTTTGTGTTGTTAGATTG TTAGTAATAGTTACTGTGAAGAACACACACTGTCCGGGCGTGGAATTATA CTGGTAAGTGGGAAAAGGTCAGAGCATGGCGTTTTCATAACCGCAGTGAT CATTCGGCAACGTATAGAGGGATAATAGGGACCGGTCTCTCTGGTGGTGG TATACACGACGGTGTCTTTCTCGCCAAGATTCCCCGTACGTACCACGAAG AAAATATTCCCCCACTACGAAAGATAATCCGCGCTATTTTGCCCGCCTTT TACGACGGCCACCCAGCCTCTCGACCCCCCCCCCGTTCCCCCCTCTCTTT CTGTCAGGCGTGGATACGCGTTTGGCGGGAGCTACGTCGTGTATTTGTCT CGTCGCCGCGGCAGCCTCCCCTGCCAACATGATTAGCTACCTCCCGAAAT CGTTCTTCGGATCGTTACTCGTGCTGATCGCTGTAGATCTGATGGTAGAA TGGCTGTGGGAGGCCAGGCTGAGGTGAGGTTTACGCTCGTCGTGATCGCT CCTGAGGAGGAGGCGTGCGTGCGTCTGTGTTGGCTTTGTTGCAGTACTAC ATTGTTGCCGCCATGTTTTCCAGTATTACCATATCACGGCCAGTTTCGAA GGCAGCCAAGTATGAATATGACGCCATGTCAGCACTTTTAGAGTGTTACT TTAGTATGCCAGTATTGCGCGCATTGTGGAGTGATTGTGATGGGCCACGA AGAACGATATAGGGATTTCCGGTAATCGATGGTTTCTGACGGACAGCTCT TGTATGCAGAGGTTCTTTGCAATATATCGTTCCAATTCGTAGGCGTGAAC CAACCGGGGAGAGATGTGTGCTATCCCCTTTGTATCACAGGCGGGAATGG GAGCGTTGCGGTAGAGGTCCGATTGATAGCCTAGCACGTCAAAAAGCCTC ATCGGCGGAACGTGAAAACAAACAAAACCCAACATAAATTACCCACAATT CCTACGGTACATTACTCGTGCAAATTTCATCACGAGATCGGGACGACATC GTTGTGAGCGACCTTGACAGCAGGCACACTTGTCGTCCGTATCATGAGTC ACGAGTGTTTTGGATTGCGAAACTGGTTCGCAATCTTGAACGAGTGAAAT AGACGCACGGGGCTGGTGATGTTGTGCTTCATCCCCACCCGCCTCTTTTT CTCCATGCGTGTCTCCGTTTATGAACAGGATGATGCGAGCCGAATACATG GTGTGTCTAGCAACCTTCGTCGCTATCCAGGCTTGTGGCCTTGAAAAGGG AATATTAGTGGGTTTTGTGCTGGCCGCTCTGAGCTTCACCATCACCTATG CGCAGGCGAGCAATTCAAAAAAGCTTCGTTACCCGTTCGACTTGATGTTT ACACATGGCATCTTGAATCCGGCGTTCATCCACTATTGGCTCAGCCTTTG CTGCACGAGTAGCTCATAGTGTGTTCGCTCATTCCAGAGCATACATCCCA CTAAAGGCTGTAATTCTAGTATTCCTTGTTTTGTACTGCTATTCTGACTG CAGAGACAGAAAGTCAACATCAAACCCGCGTGCAAAATGTAACATTCTGG TGTCATTTTGAGTAGGGTATACCGAGGCTGTCCGAAATGTAGATTAAAAC ACCTGTCCTAGTATCCTCTCCATTCAACACGCCCTCGATGATCTTCCTTG TACTCCGGCTCGCCTGTGAATCTTCCCTGTACTGTCCTATATTGCTGTTC TAAAGCTAGGAAGTCAGCATCCAACCCCACGAGCAATATGTAACACTCTT TTAAGTATTTTGAGGAGAGTGCCGACCGAGGCCGTCTGAAATGTGCGCCT GTGTTTACACGCTGCTTTCTTTTACTTTTATTTTTTTAATTCTTTGTCGT ATGCTTTTCCATATTTTTCTTATTTTTGTTTTCCTTTTTATCTTCCTTTT TATTTTATATTTTTCCTCTTTTTAATGACATCGTATTCAAGTAGTAGCTC TATACTTGTATGGATCCGTGATGTGTTTTGTTTTGTGCTGAAGTACAGGT TCCGACGGTGATGACGGCAAGGATGAAAGCGAGCAAAGTTATGAGGACCT TTGAGGAGCGGGTCATCTTACAAGCTCACCGACAGCAGACCGTTGTGCTC GACCTTCAGGCAAGGCTTTCTTGCACGCATTTCCCCCCTTCCGGTATCAG AACGCGCTCACGGACAAAAACATGCGCGCGTGTTTGTATGCGTCTCAAGT GTGTTTTCGTCTGCTCTCTTAATTCCGTCGCACTTTGACGCACCCTGCAT TTTGGCCGCCCGCAAGCAAGTGGATGTCTGGCACGGTAAACTCCCGAACT CAGCACCTCGCATTTCCCTAACCCCCTAGTACTGTTCTGCATGGACACTT GAGGACTGAAATTGTCCTTGAGCTGGTGTAGCGAACGTAAAGCTTCCAGC CCAATACTGCATCTAGATGATGAATCTACCGCAAGAAAGAAAAGGATGGA ATAGCTCTACGGAAATAGCAATCGCCCCCCCAACATGTCGCATATTTGCC GAACTACCCGCGCACCGACATATATGAGTGCTATGGCTTGCTGGACCGGA TGGCTGTTTCCCTGTATCGTGCTGTTTTTCCTGGAGCAGGGGTACATATT CTTCGGATCGGCCGCGAAGATCCTCGCGGACGTGAAGGAACGCATCATTT GGGGTGGCGACCAGACTGGCGGCATAGTATCCGCTAAAAGCCCCCGCGGC ATAAGCAGAGGCACATGCGTGGCATACGATCCCGACACTAAGACGCCTAC AACTTTTGGAAGCGCGAAAGATAGCAAATGCCTAAACGGGAACGGTGACT TACCGATTGCAGCCTCTGGCCCAAGGGCAGCATCAAAGCCAATGGAATCG ATTTCGGAGTCCACCTTGTTTACTCGACGCAGCAGCCCCCTCAACGGAAG TAAGGACGGGCTCAATCTGAGGAGTGAAGCGACCCTTTCCCCGTCAAGGG GCGGACGCTTCAATGGACAGTTCTTGGCGACTAAGCTATCTCAAGACAAC GGTAGCGGTAGCTGGAGCATGAACAACGTCGGAAGCGCCGCGTCCACTGA AGCCGTGGAAAGGACCCCTCTCGCAGACCGCAGCGTCCATATTAGCGATT GTGGTGGAGCTGCTGGTGCGAGCGCCGTTACACACGCTCGGGGGTTGAGA TACGGCGCAGTGCAGGACGGCGACAGAGAGAGGGAGAAAAGTGGGACTGG CATGTCAGGTGTTGTGCCGATTCCGATGGGAGCTACTGGGCGCCCGCGGG AGGTAAGCTTCGACTGGGAGAGAAGTGGGGCTGGATCGACGGTGGACGGT GCCGTACAAACGTACATGCCGGTGAGTGGAGGTTGAATTCTCACATAGTC TGATGTCAAAATCCAGCTCGTGGTCGCAAGGTAGAAGAACACCATCCGGA AGGGAAAAAACGTTTAACGTACTCTGTAATACAATAAGAAACAGCAATGG CGCATAATACTAATACTCGGAAAAAGCGGCATCTCCAAAGGAAAAGAAAG AGACAAACAAGAAAACACACACACCTCCTTGTTGTAAGGGGAGAGGATGG TAAAAGCAAGCGTCTGATTATTTTATTCAATTATTTACGAAAAACGGTAT TTATATGTGGATACCTGGTATTAAATATTAATCTTGTAAATAAACCTTTA ACTCATTCCAACCCTCCGAACATCCACGCCTTCTTAGCACCATAGCTCAT CTTATTTATTTAGTAATTAGTAATTAGTCATTTCATTGATATATATATAT ATATACATACCTTGTATGTTTGTTGCCATCCAATCCATAGAGCACAAAGA AAGACGATACTTTTCGGTAGATATTAGAGTGGAGGCCAGAGGAGCAAAAT AGACGAGAACTAACGAGAGACACAAGTACGACAAACGCAATCGAGTAACC TCTCACGGCGCTAGGAAGGTGTGGATGTTTGCAGGGTTGGAATGAGTTGA AGGCTGAAAGAAACCAGTGAAAAAAAAGAGGACACAAACAAGCGAAAATA CACTTAACAAATAAGGTGTACGTACACCGAATCAAATCTGTACAGTCAGG TAACGCCTGCACACAACTCTAGGGTTCCACCCCCATTTTTCTCATTGGGA GACTGTTCAAACTCGGCAAACGTTTCCCAATACCCACTACAGTACACTGA CCGGCCTTCTCTCCTAGCGCAAGTTCGAAGTCCGAACACATCGCGAACCG CCATCTGAGTGATGGCGAAGATGACCTGGAAAAGTTATTGCTTTGCCACA CGTGCTGAACCCATTGTCCGTGTCGACATGCTTCGTTTAGTTACCTGGTC CACGAGCTTGTATCCACTTTTTCCGAGGCTCCCGCAGGTGGGGCCTTAAT TTAAGGCCTAGCCATAGTCGAAGAACGATGCCTCTTTCGTCGTCCTCGGC AGTTTCTGTACCTTCTCCAGCACCCATAACCGTGTGCTGTCTCCTCGCTC GAACGAAGCGTGGGAGAGGCAATCGTCAATGCTCCTCTTGATGTAGGCAA TCCTCGCTGGCAGAAACTTGCGGCCATGAGTATCGCCGTTTACTTGCCCG GAATATGAGCGAGCATGCGGGTGAGGGCTTATACGGTGTTGTCCGATCTG ATCTATCGCCGCGTGTTGCTCTAACAAAGCGTTGGTCCCAGTCGGGATGC CAACAACGACTACTCGCTTTTGCAAAATCACTCGGACGCCAGCTTACAGT CACATAGCGGCCTCGTCAGGTCAGGGCACGTGCCCTCTGGGTCCAGCGCT GTATTTTGGAACTCCCAGCGTCCCGTTAGAGAGTTCGATAGTAAAAAAAT ATAAAACCTGTTTATTCTCCCGACGGGATCCGGCCGTGCCGCTGACATTG CCGTGGTTGGAGCGATGGCGGGACTGTTCAATACTATAGCACAATTTTCG TGCACAAAGCATTAGAGGGAGACTTCGTGCCGCAATAGCACATTTTTGTC CCTCAACTTTGTGTAGAGCCAAGAGCGTGTCTAGCTCGAGGTGCGATTCA CACAAGAAAGTAAATAGTGGCTTGCCTCTGATTTTGGATGATAAGTCTCA AGCTCTTGTAGAAGGGATTCAAACACCAAAAGAAGTGAAGGTCGATTTTT TGTACCCCCCATCCGCGGCCGTTTAACTTACTTGTTACCGAAGCTCTGGG CGAACGGTGGCGGTTCGGTGACGGACAGCCCAGAAATGAACCGATACCGT AGGTCGTCTTCGGCGGTGTCACTCCTTCCGCGTCCTGAACAGCGCACTCG CCGCGTTGTTCTTGACTTCTCCAACGTGGTGAGATTTAGAGTTTAGCAAG ATAGTTGGCTCTACGTGAGCGGGTGGATGACAAAGAGGCCTCGCGAGCGC GCTGCCTGACGCATTGTGCTCTTGTAGTGACTACGGGAGCCCAGCAAGGC ACAGATGGATGTATTAACTATGCACTATGTCTAAACTGAGCTCAAAATGG TTTCGCGCGTGGCTCGTGGCATAGCATCCCCCAACTAGCTCTCTCTACAT CTAGATATTATACCACGAAAATTAAGACGGAGGATGTAAAATATTATCGG TAAAAACAAAGTCGTTTGCTTATACGAAGAAGCTCGATCCACGGTACCAA TGTATAAGATCAAGAGCCTCCCTGATGCTCTCTCTTATTCTCTCTGTGGC TGCTGTGGCGATTGGATCATTATTTGTGAACGGTGCCAAAGGTGGGTGTT GACGCCACGGCGGCGCGATCGTGCTTCCTCATGCTGAAGATAGTGCTGCG GAGGAGCGCGGTGGAGGTAGTTTTTTCCGGTGCGAACGGTAAGATTCAGG CGCTGCTGCGGTCGCACGGGGTCATCGCGGATAACGACCCGGTTTTCGAC AGGTAGGTGTAGTGGTTTCCAGGATTTGTGTTTTGTTTTTTGCGCCGGTC GCAAATATCGGCGGGTTTAGTAGTAGTGGTGGGGAGGAGGGGAGGGGTTA GGGAAAAGGATATTGGAGCATGCTTCTTCTCCGGAAAACAGAAGCGTCAC ATAGCACTCGCGAAGACAGAGAGCGAGAAAGAGAGATATATATATATATA TACTGTATATATATACATTCTTACGAAGTCTGATACCCTAGCGTTGGGAT GCCGAGCTCTATCGGCGTGCATCCAGCAGGTAAAGGCAGTACGAACGTTT TATCCAGAGTTAGGAGGTATGTTTGCTTTGCTATTTTTCTGCTGTAGTCC TGACCCCCATCCATTTTTCCCTCCTTGCCCTTCTATCCTGGAACTCCAAA ACAATACAAAACAGCCTTGATACGGCCCTAGAGTGGTTGGAGGAAAAAAT ACTCAAGGAGCGGAAGACCGATACGCTGCTCCGCCACCGTAGAGTCGTCG GTGGCACCGGCGACAGTGGTAACAGAAGGCCAACACGCAGAGCTTCGTTT TCGGGCGCCAGCGACCCCCCGCCTCTCTCTCTGCCGTGGCCGCTGCAGTC CTGGGAAAGTTTGACGGCACGGGGAACCATGACAATAGGTTCCCAAAACG AGCTCGATGGCGGTGGCAATGGCAACCCTGGAGATGATTGCGAAGGGAAA GGGTGTGATAGCGACACGTCCCAGGCCTTGGCGTCGGCGAGAAAGGTCGA AACAGCTGCGTTCTTGGGGGACCACGAGAAGTACTACTCCAGGGCAGAAT CGTTGAGGAGGAGAAGCTCGATGGATGCTAGGACCGCAAGCAAAGGTAGG CACAAGGCAAGCAGCCAGAACTGGACACTCGTCGTGTCGTGTTCCTTTCC AAAAACATATACATGCAAACCCGGACCGTTTCAAACGCTTGGATATGCTA CTAATATTTTCAAGCGCGTTACGCCCGATTAGGGAAAACATATGCGCGCG AGGGGTTTTGTTTTTCGCATCATCTACGGCCCCCGCCGAGTGATTGGATA TGTCAGTTGATTTTCGACAGTACAGGAAGTTCGCAACCGATCGGTTTTCA GCTCTTTTCCCATTGTCCCCGTGCGTATGTAATTTTCGCCAATAATTTTG ATTTCATCCATCTCCTCGTCTTGTCATCCTTTTCCCAATTCGGAACGGTG CGCTCAGGCGGAGAGAATAATCTAGTGCCGGTGGGCGACGTGGGTTCGTT GCAATGCATCCTAGAAGACTATCTTGAAGTTGACCGCTATAAGGTAAGCG AACAAAAAACACTGCGTTGTACACAAGCTAGCATAACTGAGCGGGAGAGA GATAGCGATTGCCGCACCAAGTGATTTTTCAATCAGTCGTCGTTAGTACA TACGACGATTGGAATTATTTCATTAAAAAATCCTGTGACGCAGTAATACC CCTGCAATGTGCACTGATGCCGCAAAAATTTTGTATATAATGGTTGCCGC TGCTTTTCTATTCAGTTGAAAACCGTATGAACACGTTGCCGATTGTCCTC GATTTATTTCCGGAATATGTCTGGATGCCTTTTTTTCATTTATAAACCTT GCGGGCGCCTGTAGCCGATTGTCCGTTTTATTTTTCCGTGCCCTCTATCC GTTTGGTACCTGCTGAAATCATCAGGTGCCGGAGAGCGTTTACAGCGTTC TTCGAGAGGCGCGCCGGTTTTTCAGGCAGGAGCACGTGGATGCTGGCATG GTTATCATGGACAAAACCGTTCCCCCGGACAAGCTCTTCTTCATCGGAGC CGGAAGCGTTGAGCTGCAGGTGGGGTTGTCGGTTGGTAAAGGCTTCTGGT GGAAAGTTCGGTGATTCCCCAGATGGTATACGCCAAAACAAGTAGAGTGC TTCGATAAACAAGCCCCCCTTTCTCCACGTACCCCAGAGAGGAAAATCCC AATATTTTTCGAAGATGATTTGATGCCAGAGATACTCAATCTGATTGAAT ATGGTTTTCTCGTATACCAGCAGATATGTTTCTATCGGGCATGTGAGAGG ACGACTAACAATAACTACCTGAAAATCGCAATGACGGGGACTCTTTTAAT GTCTCATCTACAACATAAACATCGCCAGGCAACAAACAAACGCCATTATG ATGCGCGTGGTTACATACTGCAGTATATCGCTCGTGAAGGCGAGCGCCTT TTTTTTCTCAAGAATCGGGTTTCCAATTCCCAGATGACGTGTCCTCAGCT GTTTGTACTTCTCACATCTCTTGCTGCCCTCCTCCCCCATTGAAATATGT TTGCTGTTTGTGCGCTGCATACAGATCATCGGGGAGCTCGGGTACAGTAA GCGCTTCCTCAAGGTCTGCTCAGGAGGAACCTTCGGGGAGGTGGGTTTCT ACCTTAAAACACCACAGGCGTTTCGTGCCATCGCGAGGGAGCCGTGTCAC CTCCATACGCTGGACAGAGAGGGCATGGCCAAGATGCAGGTAAGTTGGGA GCGTCTCGAGTTCGTCGAAGTGCTCAAACATGATCGGAAAACATTAATCA GAAGATGCAGAGAGTACTTTATGCGTCCGGTTCGCGTTGGCCCCTAAATC GGGCCCGACAGTATCTCACCCAGTTTTAAGACTTTTATGAATAGAACCAG GTCGAAGCAACAGCCATGCGTTTTCCTGGCAAAACATCTGCCTGGTATAA ACATATCTCCTCTTATTGCCTTCTTGCAGTATCGCTGCTGCAGATGTGCC ACGCTGCTGTGTAGTGTTCAATAGTTTTTTTACAGAGAAACCCGCCTACG TCCGGCCGATACGCGCTGAAGGACTCTTACCTCCGCTTACTTTTGACCAG AGAAGAACATTGGGGTGCGTGTTGCTTCATATATTCGGTAGGGAAAACTC ACTTGATTCGTGATAAATTTGCCCCCCTCTGATTCTTCGCCGACTGGAGT TGAAAAGGCCGCAAACCGTTTTGATCAGCCGCGGGTATCCCCCATCCCAA ACCCGTCCCCGTCAAGATTGACTGACATTTCGTTCTAAATATGATCTGAA ACCGTCGCGTGGCACCGTTTAACAGCAGCAACATCAACAAATTGTTGGAA ATGCCTTCGCGTAGTGCCAATTTCCAGGGCTCTGCTTTCTAGTCCTCAAT AGCGACTAGCTGTGAAGTTTCGTGCTGTTTCCTCGCATTTTAATCGCGTT CGGGGACTAAACGTGTTGCGTGACGCGTGTTATTCTGATAACATAATGGG AAATATCGTCTGCAGCGCGAAAACCCGGGGCTGTGCGTTCTGGTCCAAAA CGCGGTGTTGAAGTCTATCTGCCTCGCGGCCTCGATCTCCATGGAATCAG CTCATTTTGGTCCTGTGGACAAAAGCGGGGCAGCAGATCGACTAACCTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig5877:521..10620+

>mRNA_H-elongata_contig5877.13370.1 ID=mRNA_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5184bp|location=Sequence derived from alignment at H-elongata_contig5877:521..10620+ (Himanthalia elongata Himel1 dioecious)
ATGACCGCCGTCGTGGCCTTCTCGAGCTCCCTGGACGTGGCCGCCATCGA
GATGGGTATGGGGAAGCCGCTGGACTTCAACAAGGAACTCAAGACTATGA
CCGCCGTCGTGGCCTTCTCGAGCTCCCTGGACGTGGCCGCCATCGAGATG
GGTATGGGGAAGCCGCTGGACTTCAACAAGGAACTCAAGACTGTGGGTTG
GTCGAACGTAATATCGGGGCTTACAGGTGGATTCACTGGCAGCTACATCT
TCAGCCAGACGATATTTAATATGCGCGCAGGTGGGTTGGTCGAACGTAAT
ATCGGGGCTTACAGGTGGATTCACTGGCAGCTACATCTTCAGCCAGACGA
TATTTAATATGCGCGCAGGCGTGGATACGCGTTTGGCGGGAGCTACGTCG
TGTATTTGTCTCGTCGCCGCGGCAGCCTCCCCTGCCAACATGATTAGCTA
CCTCCCGAAATCGTTCTTCGGATCGTTACTCGTGCTGATCGCTGTAGATC
TGATGGTAGAATGGCTGTGGGAGGCCAGGCTGAGGCGTGGATACGCGTTT
GGCGGGAGCTACGTCGTGTATTTGTCTCGTCGCCGCGGCAGCCTCCCCTG
CCAACATGATTAGCTACCTCCCGAAATCGTTCTTCGGATCGTTACTCGTG
CTGATCGCTGTAGATCTGATGGTAGAATGGCTGTGGGAGGCCAGGCTGAG
GATGATGCGAGCCGAATACATGGTGTGTCTAGCAACCTTCGTCGCTATCC
AGGCTTGTGGCCTTGAAAAGGGAATATTAGTGGGTTTTGTGCTGGCCGCT
CTGAGCTTCACCATCACCTATGCGCAGGCGAGCAATTCAAAAAAGCTTCG
ATGATGCGAGCCGAATACATGGTGTGTCTAGCAACCTTCGTCGCTATCCA
GGCTTGTGGCCTTGAAAAGGGAATATTAGTGGGTTTTGTGCTGGCCGCTC
TGAGCTTCACCATCACCTATGCGCAGGCGAGCAATTCAAAAAAGCTTCTA
CAGGTTCCGACGGTGATGACGGCAAGGATGAAAGCGAGCAAAGTTATGAG
GACCTTTGAGGAGCGGGTCATCTTACAAGCTCACCGACAGCAGACCGTTT
ACAGGTTCCGACGGTGATGACGGCAAGGATGAAAGCGAGCAAAGTTATGA
GGACCTTTGAGGAGCGGGTCATCTTACAAGCTCACCGACAGCAGACCGTT
CAGGGGTACATATTCTTCGGATCGGCCGCGAAGATCCTCGCGGACGTGAA
GGAACGCATCATTTGGGGTGGCGACCAGACTGGCGGCATAGTATCCGCTA
AAAGCCCCCGCGGCATAAGCAGAGGCACATGCGTGGCATACGATCCCGAC
ACTAAGACGCCTACAACTTTTGGAAGCGCGAAAGATAGCAAATGCCTAAA
CGGGAACGGTGACTTACCGATTGCAGCCTCTGGCCCAAGGGCAGCATCAA
AGCCAATGGAATCGATTTCGGAGTCCACCTTGTTTACTCGACGCAGCAGC
CCCCTCAACGGAAGTAAGGACGGGCTCAATCTGAGGAGTGAAGCGACCCT
TTCCCCGTCAAGGGGCGGACGCTTCAATGGACAGTTCTTGGCGACTAAGC
TATCTCAAGACAACGGTAGCGGTAGCTGGAGCATGAACAACGTCGGAAGC
GCCGCGTCCACTGAAGCCGTGGAAAGGACCCCTCTCGCAGACCGCAGCGT
CCATATTAGCGATTGTGGTGGAGCTGCTGGTGCGAGCGCCGTTACACACG
CTCGGGGGTTGAGATACGGCGCAGTGCAGGACGGCGACAGAGAGAGGGAG
AAAAGTGGGACTGGCATGTCAGGTGTTGTGCCGATTCCGATGGGAGCTAC
TGGGCGCCCGCGGGAGGTAAGCTTCGACTGGGAGAGAAGTGGGGCTGGAT
CGACGGTGGACGGTGCCGTACAAACGTACATGCCGCAGGGGTACATATTC
TTCGGATCGGCCGCGAAGATCCTCGCGGACGTGAAGGAACGCATCATTTG
GGGTGGCGACCAGACTGGCGGCATAGTATCCGCTAAAAGCCCCCGCGGCA
TAAGCAGAGGCACATGCGTGGCATACGATCCCGACACTAAGACGCCTACA
ACTTTTGGAAGCGCGAAAGATAGCAAATGCCTAAACGGGAACGGTGACTT
ACCGATTGCAGCCTCTGGCCCAAGGGCAGCATCAAAGCCAATGGAATCGA
TTTCGGAGTCCACCTTGTTTACTCGACGCAGCAGCCCCCTCAACGGAAGT
AAGGACGGGCTCAATCTGAGGAGTGAAGCGACCCTTTCCCCGTCAAGGGG
CGGACGCTTCAATGGACAGTTCTTGGCGACTAAGCTATCTCAAGACAACG
GTAGCGGTAGCTGGAGCATGAACAACGTCGGAAGCGCCGCGTCCACTGAA
GCCGTGGAAAGGACCCCTCTCGCAGACCGCAGCGTCCATATTAGCGATTG
TGGTGGAGCTGCTGGTGCGAGCGCCGTTACACACGCTCGGGGGTTGAGAT
ACGGCGCAGTGCAGGACGGCGACAGAGAGAGGGAGAAAAGTGGGACTGGC
ATGTCAGGTGTTGTGCCGATTCCGATGGGAGCTACTGGGCGCCCGCGGGA
GGTAAGCTTCGACTGGGAGAGAAGTGGGGCTGGATCGACGGTGGACGGTG
CCGTACAAACGTACATGCCGCTCTGGGCGAACGGTGGCGGTTCGGTGACG
GACAGCCCAGAAATGAACCGATACCGTAGGTCGTCTTCGGCGGTGTCACT
CCTTCCGCGTCCTGAACAGCGCACTCGCCGCGTTGTTCTTGACTTCTCCA
ACGTGCTCTGGGCGAACGGTGGCGGTTCGGTGACGGACAGCCCAGAAATG
AACCGATACCGTAGGTCGTCTTCGGCGGTGTCACTCCTTCCGCGTCCTGA
ACAGCGCACTCGCCGCGTTGTTCTTGACTTCTCCAACGTGGTGGGTGTTG
ACGCCACGGCGGCGCGATCGTGCTTCCTCATGCTGAAGATAGTGCTGCGG
AGGAGCGCGGTGGAGGTAGTTTTTTCCGGTGCGAACGGTAAGATTCAGGC
GCTGCTGCGGTCGCACGGGGTCATCGCGGATAACGACCCGGTTTTCGACA
GGTGGGTGTTGACGCCACGGCGGCGCGATCGTGCTTCCTCATGCTGAAGA
TAGTGCTGCGGAGGAGCGCGGTGGAGGTAGTTTTTTCCGGTGCGAACGGT
AAGATTCAGGCGCTGCTGCGGTCGCACGGGGTCATCGCGGATAACGACCC
GGTTTTCGACAGCCTTGATACGGCCCTAGAGTGGTTGGAGGAAAAAATAC
TCAAGGAGCGGAAGACCGATACGCTGCTCCGCCACCGTAGAGTCGTCGGT
GGCACCGGCGACAGTGGTAACAGAAGGCCAACACGCAGAGCTTCGTTTTC
GGGCGCCAGCGACCCCCCGCCTCTCTCTCTGCCGTGGCCGCTGCAGTCCT
GGGAAAGTTTGACGGCACGGGGAACCATGACAATAGGTTCCCAAAACGAG
CTCGATGGCGGTGGCAATGGCAACCCTGGAGATGATTGCGAAGGGAAAGG
GTGTGATAGCGACACGTCCCAGGCCTTGGCGTCGGCGAGAAAGGTCGAAA
CAGCTGCGTTCTTGGGGGACCACGAGAAGTACTACTCCAGGGCAGAATCG
TTGAGGAGGAGAAGCTCGATGGATGCTAGGACCGCAAGCAAAGCCTTGAT
ACGGCCCTAGAGTGGTTGGAGGAAAAAATACTCAAGGAGCGGAAGACCGA
TACGCTGCTCCGCCACCGTAGAGTCGTCGGTGGCACCGGCGACAGTGGTA
ACAGAAGGCCAACACGCAGAGCTTCGTTTTCGGGCGCCAGCGACCCCCCG
CCTCTCTCTCTGCCGTGGCCGCTGCAGTCCTGGGAAAGTTTGACGGCACG
GGGAACCATGACAATAGGTTCCCAAAACGAGCTCGATGGCGGTGGCAATG
GCAACCCTGGAGATGATTGCGAAGGGAAAGGGTGTGATAGCGACACGTCC
CAGGCCTTGGCGTCGGCGAGAAAGGTCGAAACAGCTGCGTTCTTGGGGGA
CCACGAGAAGTACTACTCCAGGGCAGAATCGTTGAGGAGGAGAAGCTCGA
TGGATGCTAGGACCGCAAGCAAAGGCGGAGAGAATAATCTAGTGCCGGTG
GGCGACGTGGGTTCGTTGCAATGCATCCTAGAAGACTATCTTGAAGTTGA
CCGCTATAAGGCGGAGAGAATAATCTAGTGCCGGTGGGCGACGTGGGTTC
GTTGCAATGCATCCTAGAAGACTATCTTGAAGTTGACCGCTATAAGGTGC
CGGAGAGCGTTTACAGCGTTCTTCGAGAGGCGCGCCGGTTTTTCAGGCAG
GAGCACGTGGATGCTGGCATGGTTATCATGGACAAAACCGTTCCCCCGGA
CAAGCTCTTCTTCATCGGAGCCGGAAGCGTTGAGCTGCAGGTGCCGGAGA
GCGTTTACAGCGTTCTTCGAGAGGCGCGCCGGTTTTTCAGGCAGGAGCAC
GTGGATGCTGGCATGGTTATCATGGACAAAACCGTTCCCCCGGACAAGCT
CTTCTTCATCGGAGCCGGAAGCGTTGAGCTGCAGATCATCGGGGAGCTCG
GGTACAGTAAGCGCTTCCTCAAGGTCTGCTCAGGAGGAACCTTCGGGGAG
GTGGGTTTCTACCTTAAAACACCACAGGCGTTTCGTGCCATCGCGAGGGA
GCCGTGTCACCTCCATACGCTGGACAGAGAGGGCATGGCCAAGATGCAGA
TCATCGGGGAGCTCGGGTACAGTAAGCGCTTCCTCAAGGTCTGCTCAGGA
GGAACCTTCGGGGAGGTGGGTTTCTACCTTAAAACACCACAGGCGTTTCG
TGCCATCGCGAGGGAGCCGTGTCACCTCCATACGCTGGACAGAGAGGGCA
TGGCCAAGATGCAGCGCGAAAACCCGGGGCTGTGCGTTCTGGTCCAAAAC
GCGGTGTTGAAGTCTATCTGCCTCGCGGCCTCGATCTCCATGGAATCAGC
TCATTTTGGTCCTGTGGACAAAAGCGGGGCAGCAGATCGACTAACCTGAC
GCGAAAACCCGGGGCTGTGCGTTCTGGTCCAAAACGCGGTGTTGAAGTCT
ATCTGCCTCGCGGCCTCGATCTCCATGGAATCAGCTCATTTTGGTCCTGT
GGACAAAAGCGGGGCAGCAGATCGACTAACCTGA
back to top