mRNA_H-elongata_contig5874.13369.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5874.13369.1
Unique NamemRNA_H-elongata_contig5874.13369.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 1.860e-166
Identity = 275/371 (74.12%), Postives = 309/371 (83.29%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIG--------CRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRY-------------ARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            +VEMP IPVLA MEVSGVVFLPERVTRFS ALG+ LEGL+R+AV A G R FNLASPDQVADVLFKHLKLPSPPVKAGS+ ASTSAEVLEGL GKH VVAP+LEFRGVNKYKTTYVDKL+E+A GAA+ +SAVP ++G AGA RIHA W+QTS RTGRLSCSRPNLQQ +PK SDPLAGV GVNVRDAF A++ FTLMAADYSQIEMRVLADAC DP L ++F+++G          GGDVYR+LAAQVF K+E  +SD ER RAKVVCLGI YGMGTPQVA+KLE+TESQAQGLV+SFL+AFP IE F+ ATRRY             ARE GYVCTLTGRRR+L +I NS++AA KAQAERQAVNSV+Q
Sbjct:  746 QVEMPAIPVLAGMEVSGVVFLPERVTRFSDALGNHLEGLKRTAVKAVGGRDFNLASPDQVADVLFKHLKLPSPPVKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAAESAVPASQG-AGAARIHATWNQTSARTGRLSCSRPNLQQ-MPKGSDPLAGVEGVNVRDAFSATRSFTLMAADYSQIEMRVLADACRDPGLRNLFATLGGTNDAGASTGGGDVYRKLAAQVFAKEEHGVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQ 1114
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BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 4.840e-67
Identity = 116/161 (72.05%), Postives = 135/161 (83.85%), Query Frame = 1 
Query:  592 MAADYSQIEMRVLADACGDPALSDMFSSIG--------CRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            MAADYSQIEMRVLADAC DP L ++F+++G          GGDVYR+LAAQVF K+E  +SD ER RAKVVCLGI YGMGTPQVA+KLE+TESQAQGLV+SFL+AFP IE F+ ATRR+ARE GYVCTLTGRRR+L +I NS++AA KAQAERQAVNSV+Q
Sbjct:    1 MAADYSQIEMRVLADACRDPGLRNLFATLGGTNDAGAGTGGGDVYRKLAAQVFGKEEQSVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQ 161
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BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A6H5J5W8_9PHAE (POLAc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5W8_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 9.440e-67
Identity = 135/218 (61.93%), Postives = 150/218 (68.81%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQ--------------------------------------------------VADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQ 504
            +VEMP +PVLA MEVSGVVFLPERVTRFS ALG+ LEGL+R+AV A G R FNLASPDQ                                                  VAD+LFKHLKLPSPP+KAGS+ ASTSAEVLEGL GKH VVAP+LEFRGVNKYKTTYVDKL+E+A GAA+ DSAVP ++G AGA RIHA W+QTS RTGRLSCSRPNLQQ
Sbjct:  702 QVEMPTVPVLAGMEVSGVVFLPERVTRFSNALGNHLEGLKRTAVKAVGGRDFNLASPDQAKKQQIGKRMQQGRIDGSSRSRRRVASFRTGSCQRGLREGAHGGQGGGTAVADILFKHLKLPSPPLKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAADSAVPASQG-AGATRIHATWNQTSARTGRLSCSRPNLQQ 918
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A4V2BEV9_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A4V2BEV9_9GAMM)

HSP 1 Score: 206 bits (525), Expect = 3.960e-58
Identity = 138/350 (39.43%), Postives = 199/350 (56.86%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            ++EMP++PVLA +E +GV+   E + R SA L   +   ++ A   AG R FNL SP Q+  +LF+ LKLP+  VK  S   ST+ E LE +  +H +   +LE+RG+ K ++TY DKL                    AG  R+H  +HQ    TGRLS S PNLQ      + P+    G  +R AF+A  G  L+A DYSQIE+R++A   GD AL   F S    G D++R  AA+VF K    +S +ER  AK +  G++YGM    +AR+L V   +AQ  +  +   +P +  F+  TR++AR+RGYV T+ GRR  L  I +S++AA +A AER A+N+ +Q
Sbjct:  160 EIEMPLVPVLARVESNGVLVDAEELRRQSAELSRRMLLAQQQATQLAG-RSFNLDSPKQLCALLFEELKLPAL-VKTPSGAPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPGMI---------------NAGTGRVHTNYHQAGAATGRLSSSDPNLQ------NIPIRSEEGRRIRKAFIAPPGRKLVACDYSQIELRIMAHLSGDEALVRAFES----GADIHRATAAEVFGKPLDGVSGNERRAAKAINFGLMYGMSAFGLARQLGVPRGEAQDYIALYFSRYPGVRDFMERTRQHARDRGYVETVFGRRLALDYI-HSRNAAQRAGAERAAINAPMQ 481
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A3E0QT28_9BACT (DNA polymerase I (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3E0QT28_9BACT)

HSP 1 Score: 203 bits (516), Expect = 4.400e-57
Identity = 133/351 (37.89%), Postives = 200/351 (56.98%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFV-ASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
             +EMP++PVLA ME  G+    + +  +S  LG+++  L R  +  AG R FN+ SP Q+ +VLF  LKL   P K  + + +TS  +LEGL   HP++  +L FR + K K+TYVD L E           V V  G     RIH +++QT   TGRLS + PNLQ      + P+    G  VR  FV A+    LMAADYSQIE+RV+A   GD A+   F +    G D++R  AA+VF      ++  +R+ AK V  GI+YG+    ++++ +++  +A+  +  + R +P I+ ++      ARE+GYV T+TGRRR L  I +S++A ++  +ER AVN+ IQ
Sbjct:  127 NIEMPLVPVLARMEREGIKVDVDALNTYSGELGEIIVRLEREIIEMAG-RPFNVGSPRQLGEVLFDDLKLSDKPKKTKTGQYATSEAILEGLRKSHPIIEHILNFRELKKLKSTYVDALPEL----------VHVKTG-----RIHTSFNQTVAATGRLSSTNPNLQ------NIPIRTENGRKVRAMFVPANDEHILMAADYSQIELRVIAALAGDEAMISAFKN----GEDIHRATAAKVFEVAPEEVTREQRSNAKTVNFGIVYGVSAFGLSQQTDMSRKEAKAAIDGYFRTYPGIKEYMDKQVAVAREKGYVETITGRRRYLKDI-DSRNAVVRGHSERNAVNAPIQ 450
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.330e-56
Identity = 149/373 (39.95%), Postives = 200/373 (53.62%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPP-----VKAGSLRASTSAEVLEGLLGK--------HPVVAPVLEFRGVNKYKTTYVDKLS---------EKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVA-SKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            ++E PV  +L+AME  GV F+P+R       L   ++ L   A + A +  F L+SP QV+ +LF  L L  P        +GS   STS E L+ +  +        H ++  +LEFR +NK  TTY+  L          +K +    TD  +        A+RIH  W QT+VRTGRLSC +PN+QQ       P  G  GVN RD FVA S    L A DYSQ E+R+LA   GD  L  MF   G    D+Y+++++ +       +SD ER   K V L I+YGMG PQVA+KL VT S AQ    SF R F  +  ++  T+ +AR+  +V T+ GRRR L  I NS   A KAQAERQAVN++IQ
Sbjct:  674 EIESPVQSILSAMECIGVGFVPKRFLGIQKQLEKKIDELVAEARSIAKDNNFLLSSPQQVSHLLFDVLNLAIPQGLQAKTVSGSQHRSTSEEALKAIQAEAKSKSNTGHRIIDILLEFRSLNKLLTTYIRPLPNFARKGEYRKKKSKKYKTDVTM--------AMRIHPMWMQTAVRTGRLSCRKPNMQQV------PNVGAFGVNPRDGFVATSSEKCLFACDYSQNEIRILAHMSGDQTLISMFREDGV---DIYKQMSSAITGMPVDEVSDKERKIYKQVTLAILYGMGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDI-NSTDTAKKAQAERQAVNTIIQ 1028
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.760e-56
Identity = 141/369 (38.21%), Postives = 202/369 (54.74%), Query Frame = 1 
Query:    4 VEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKA-----GSLRASTSAEVLEGLLGK-----HP--VVAPVLEFRGVNKYKTTYVDKLS----EKAAGAASTDSAVPVARGG----AGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            +E P+  VL++ME +G+ F P R+      L   ++ L   A +   +  F L+SP QV+  LF  +++P P   +     GS   STS E L+ +  +     +P  +V  +LEFR +NK  TTY+  L     + + G + +       R      +G VRIH  W QT+VRTGRLSC +PN+QQ       P  GV GVN RDAF AS    L+ ADY Q E+R+LA    D  L +MF S      D+Y+++A+    K    +SD ER   K V L ++YGMG PQVA+KL V+ S AQ  + +F R F  +  ++ AT+ +AR   +V T++GRRR L  I +      +AQAERQAVN++IQ
Sbjct:   31 IESPLQSVLSSMECTGIDFRPSRLLGIQQQLERKIQALTDEARSITKDSTFLLSSPQQVSHYLFDIMRIPLPKGLSTKQVGGSQHRSTSEEALKAIRAEAKKKGNPLHIVDIILEFRTLNKMLTTYIRPLPNFARDMSTGKSRSXXXXXXXRQSNDEKSGFVRIHPMWMQTAVRTGRLSCRKPNMQQI------PTDGVLGVNPRDAFTASPHKCLVTADYCQKEIRILAHMANDDTLLNMFRSK--EEVDIYKQMASACCNKPVEKVSDEERRIYKQVTLAVLYGMGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSGDKGK-RAQAERQAVNTIIQ 390
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A2D8USQ5_9BACT (DNA polymerase I n=4 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2D8USQ5_9BACT)

HSP 1 Score: 207 bits (526), Expect = 3.030e-56
Identity = 131/351 (37.32%), Postives = 198/351 (56.41%), Query Frame = 1 
Query:    1 KVEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVA-SKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            +VEMP+IPVL +ME  GV    + + +FS  L   +  L +     AG   FN+ASP Q+ +VLF HLKL   P K  + + +T+  VL+ L  +H +V  +L++R V+K ++TY + L +                  AG  RIH  +HQ +  TGRLS   PNLQ      + P+    G  +R AFV   +GFTL++ADYSQIE+RV+A   GDP++   F S    G D++   AA VF  +   +++  R +AK+V  G++YGM    ++++L ++   A  ++  +  +FP I+ ++  T   ARERGYV TL GRRR L  I ++ +  ++A AER A+NS IQ
Sbjct:  535 EVEMPLIPVLVSMEKEGVRLDTDAMVQFSDQLLQQMTHLEQRVYELAG-MNFNIASPKQLGEVLFDHLKLVEKPKKTRTGQYATNENVLQQLASEHAIVQTILDYRMVSKLRSTYAEALPQNIH---------------AGTGRIHTTFHQVATATGRLSSQSPNLQ------NIPIRHALGQEIRKAFVPRQEGFTLLSADYSQIELRVMASMSGDPSMKAAFES----GQDIHAATAAHVFHVEVEAVTEEMRRKAKMVNFGVLYGMSAFGLSQRLGISRKDASEIIDHYWASFPSIKAYMDRTVEQARERGYVETLLGRRRYLPDIQSA-NGTIRAMAERNAINSPIQ 858
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: UPI00048B1896 (DNA polymerase I n=1 Tax=Thermomonas fusca TaxID=215690 RepID=UPI00048B1896)

HSP 1 Score: 204 bits (518), Expect = 4.730e-56
Identity = 134/349 (38.40%), Postives = 199/349 (57.02%), Query Frame = 1 
Query:    4 VEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            +EMP++PVLA +E +GV+   + + R SA LG  +   ++ A   AG R FNL SP Q+  +LF  LKLP+  VK      ST+ E LE +  +H +   +LE+RG+ K ++TY DKL E      + D+            R+H ++HQ    TGRLS S PNLQ      + P+    G  +R AF+A  G  L+A DYSQIE+R++A    DPAL   F+     G D++R  AA+VF K    +S +ER  AK +  G+IYGMG   +A++L V   +AQ  +  +   +P +  ++  TR+ AR+ G+V T+ GRR  L  I +S++AA +A AER A+N+ +Q
Sbjct:  311 IEMPLVPVLARVEANGVLIDADELRRQSAELGRRMLAAQQQATELAG-RSFNLDSPKQLGALLFDELKLPAL-VKTPGGAPSTNEEALEAIADQHELPRIILEYRGLAKLRSTYTDKLPEMV----NPDTG-----------RVHTSYHQAGAATGRLSSSDPNLQ------NIPIRSEEGRRIRTAFIAPPGRKLVACDYSQIELRIMAHLSEDPALLRAFAE----GADIHRATAAEVFGKPVAEVSGNERRAAKAINFGLIYGMGAFGLAKQLGVGRGEAQDYIALYFSRYPGVRDYMERTRQQARDAGFVETVFGRRLALDYI-HSRNAAQRAGAERAAINAPMQ 631
[Close]
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Match: A0A7G9QX48_9GAMM (DNA polymerase I n=1 Tax=Thermomonas brevis TaxID=215691 RepID=A0A7G9QX48_9GAMM)

HSP 1 Score: 206 bits (524), Expect = 5.360e-56
Identity = 136/349 (38.97%), Postives = 199/349 (57.02%), Query Frame = 1 
Query:    4 VEMPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFNLASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVLEFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTSVRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYSQIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHERTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLTATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQ 1050
            +EMP++PVLA +E +GV+   E + R SA L   +   ++ A   AG R FNL SP Q+  +LF  LKLP+  VK  S   ST+ E LE +  +H +   +LE+RG+ K ++TY DKL E      + D+            R+H ++HQ    TGRLS S PNLQ      + P+    G  +R AFVA  G  L+A DYSQIE+R++A    DPAL   F+     G D++R  AA+VF K    +S +ER  AK +  G+IYGMG   +AR+L +   +AQ  +  +   +P +  ++  TR+ AR+ GYV T+ GRR  L  I +S++A+ +A AER A+N+ +Q
Sbjct:  522 IEMPLVPVLARVEANGVMIDAEELRRQSAELSRRMLAAQQKATELAG-RSFNLDSPKQLCALLFDELKLPAL-VKTPSGAPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMI----NPDTG-----------RVHTSYHQAGAATGRLSSSDPNLQ------NIPIRSEEGRRIRTAFVAPPGRRLVACDYSQIELRIMAHLSEDPALLRAFAE----GADIHRATAAEVFGKPMAEVSANERRAAKAINFGLIYGMGAFGLARQLGIGRGEAQDYIALYFSRYPGVRDYMERTRQQARDAGYVETVFGRRLALDYI-HSRNASQRASAERAAINAPMQ 842
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5874.13369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK42_ECTSI1.860e-16674.12DNA-directed DNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JBL3_9PHAE4.840e-6772.05DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5J5W8_9PHAE9.440e-6761.93POLAc domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4V2BEV9_9GAMM3.960e-5839.43DNA polymerase I (Fragment) n=1 Tax=Xanthomonadace... [more]
A0A3E0QT28_9BACT4.400e-5737.89DNA polymerase I (Fragment) n=1 Tax=Bacteroidetes ... [more]
A0A6V2EN94_9STRA2.330e-5639.95Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9VQU8_9STRA2.760e-5638.21Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A2D8USQ5_9BACT3.030e-5637.32DNA polymerase I n=4 Tax=Verrucomicrobiales TaxID=... [more]
UPI00048B18964.730e-5638.40DNA polymerase I n=1 Tax=Thermomonas fusca TaxID=2... [more]
A0A7G9QX48_9GAMM5.360e-5638.97DNA polymerase I n=1 Tax=Thermomonas brevis TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5874contigH-elongata_contig5874:823..11169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.8
Seed ortholog evalue6.4e-140
Seed eggNOG ortholog2880.D7FK42
Preferred namePOL1A
KEGG rclassRC02795
KEGG koko:K02335,ko:K02349
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440
EggNOG free text desc.plastid DNA replication
EggNOG OGsCOG0749@1,KOG0950@2759
Ec32 ortholog descriptionDNA-directed DNA polymerase, family A, palm domain
Ec32 orthologEc-04_005890.1
EC2.7.7.7
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons10
Model size1068
Cds size1059
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930952.3421302-UTR-H-elongata_contig5874:822..8311622930952.3421302-UTR-H-elongata_contig5874:822..831Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5874 823..831 +
1691679638.181895-UTR-H-elongata_contig5874:822..8311691679638.181895-UTR-H-elongata_contig5874:822..831Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5874 823..831 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930952.3850353-CDS-H-elongata_contig5874:831..9991622930952.3850353-CDS-H-elongata_contig5874:831..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 832..999 +
1691679638.1935408-CDS-H-elongata_contig5874:831..9991691679638.1935408-CDS-H-elongata_contig5874:831..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 832..999 +
1622930952.4451945-CDS-H-elongata_contig5874:2479..25301622930952.4451945-CDS-H-elongata_contig5874:2479..2530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 2480..2530 +
1691679638.2020726-CDS-H-elongata_contig5874:2479..25301691679638.2020726-CDS-H-elongata_contig5874:2479..2530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 2480..2530 +
1622930952.47106-CDS-H-elongata_contig5874:3127..32401622930952.47106-CDS-H-elongata_contig5874:3127..3240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 3128..3240 +
1691679638.2119653-CDS-H-elongata_contig5874:3127..32401691679638.2119653-CDS-H-elongata_contig5874:3127..3240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 3128..3240 +
1622930952.4901297-CDS-H-elongata_contig5874:6030..61931622930952.4901297-CDS-H-elongata_contig5874:6030..6193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 6031..6193 +
1691679638.2207677-CDS-H-elongata_contig5874:6030..61931691679638.2207677-CDS-H-elongata_contig5874:6030..6193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 6031..6193 +
1622930952.5081213-CDS-H-elongata_contig5874:6556..66701622930952.5081213-CDS-H-elongata_contig5874:6556..6670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 6557..6670 +
1691679638.2297473-CDS-H-elongata_contig5874:6556..66701691679638.2297473-CDS-H-elongata_contig5874:6556..6670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 6557..6670 +
1622930952.5248978-CDS-H-elongata_contig5874:7581..76831622930952.5248978-CDS-H-elongata_contig5874:7581..7683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 7582..7683 +
1691679638.2379627-CDS-H-elongata_contig5874:7581..76831691679638.2379627-CDS-H-elongata_contig5874:7581..7683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 7582..7683 +
1622930952.5418508-CDS-H-elongata_contig5874:7840..79191622930952.5418508-CDS-H-elongata_contig5874:7840..7919Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 7841..7919 +
1691679638.2465115-CDS-H-elongata_contig5874:7840..79191691679638.2465115-CDS-H-elongata_contig5874:7840..7919Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 7841..7919 +
1622930952.5624266-CDS-H-elongata_contig5874:8370..84201622930952.5624266-CDS-H-elongata_contig5874:8370..8420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 8371..8420 +
1691679638.2585945-CDS-H-elongata_contig5874:8370..84201691679638.2585945-CDS-H-elongata_contig5874:8370..8420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 8371..8420 +
1622930952.5840852-CDS-H-elongata_contig5874:10091..101621622930952.5840852-CDS-H-elongata_contig5874:10091..10162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 10092..10162 +
1691679638.2717924-CDS-H-elongata_contig5874:10091..101621691679638.2717924-CDS-H-elongata_contig5874:10091..10162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 10092..10162 +
1622930952.6025898-CDS-H-elongata_contig5874:11021..111691622930952.6025898-CDS-H-elongata_contig5874:11021..11169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 11022..11169 +
1691679638.2814252-CDS-H-elongata_contig5874:11021..111691691679638.2814252-CDS-H-elongata_contig5874:11021..11169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5874 11022..11169 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5874.13369.1prot_H-elongata_contig5874.13369.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5874 832..11169 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5874.13369.1

>prot_H-elongata_contig5874.13369.1 ID=prot_H-elongata_contig5874.13369.1|Name=mRNA_H-elongata_contig5874.13369.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=353bp
MPVIPVLAAMEVSGVVFLPERVTRFSAALGDLLEGLRRSAVAAAGNRGFN
LASPDQVADVLFKHLKLPSPPVKAGSLRASTSAEVLEGLLGKHPVVAPVL
EFRGVNKYKTTYVDKLSEKAAGAASTDSAVPVARGGAGAVRIHAAWHQTS
VRTGRLSCSRPNLQQQIPKSSDPLAGVAGVNVRDAFVASKGFTLMAADYS
QIEMRVLADACGDPALSDMFSSIGCRGGDVYRRLAAQVFRKKEGVISDHE
RTRAKVVCLGIIYGMGTPQVARKLEVTESQAQGLVQSFLRAFPKIETFLT
ATRRYARERGYVCTLTGRRRNLSQIMNSQSAALKAQAERQAVNSVIQVRA
HR*
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mRNA from alignment at H-elongata_contig5874:823..11169+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5874.13369.1 ID=mRNA_H-elongata_contig5874.13369.1|Name=mRNA_H-elongata_contig5874.13369.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=10347bp|location=Sequence derived from alignment at H-elongata_contig5874:823..11169+ (Himanthalia elongata Himel1 dioecious)
AAGGTGGAAATGCCGGTGATCCCAGTCTTGGCGGCGATGGAGGTGTCCGG
GGTTGTTTTCCTGCCCGAGAGGGTCACTCGCTTTTCGGCGGCGCTAGGAG
ACCTGCTGGAGGGACTGAGGCGGTCGGCGGTGGCCGCGGCCGGGAACAGA
GGCTTCAACCTCGCTTCTCCTGATCAGGTAGGTCTCCCTGTGGTGTGCCG
GCTTCGAAGGGGGGGGAAGGGGGGAGATACTGCTCGCAATTTTTCGATTT
GATTGTGCAACCAAAACCAAATAGAGGCGTACATTACTTGGTCCATGAGG
TTGCCTGAATAGGCTGCACCCGTTACTCAAGCTACCTTGAGGACTTTTGG
CTCAGTACCGCTGGACTCTCGGTAGTAAACGCCATCGGTACACAATTGCG
TGACCTGATGAAATCGGGATTGACCCGATGGCGGTTGACAGTTGACGGTA
GAGATGGACGCCGTCGTGGAAAACCGGAGGATCGAGAGGATCCCGGGAAT
GGTTGAACAAATGAGCAGGATGACGCGAGACGGAACGGCTGAACCCGTCT
CGCGAGACCAAAATCTCAGGCGCGAACGGGGAGAGAGAAAATGATTTTCC
CTGTTCAGCTGACCACGAGCAGAAGGAAACCAAATCCGGTTGATCCTTTT
GCGAAATGTTCGACAATACATAAATATGATTTTCGTTATCTCCCGCGCTT
TGCCCGCCTCCCACCGCGCGTTGCTTTTTTTTCCCCACTTAAAAAAATAT
ACAATTTGGCGTTGGAATCGACTGCTGGTGCAATACTACTGCAGTGCAGC
ACGCCAGTACATTTATATTAAAAAAAACATACATGAACTCATTCAAACCC
TCCGAAAGTCCTCATGTTATTTACGCCATGAGAGGTGAAGTCCAGGGGAT
CAATTATCGTCAGGTTCGAGTGTGTATTTTTATGTACCCGGTATAATCTC
GTCGTTGCCCTTCCTTACATGGGCTCGAGTCCAGATTTTCGCTTCCGCAC
TTTCCTAGAAAGGTCGCCGCGATTGTGACGGCAGGCACTAAAGGCCACGC
AGAAGCTTGTGTTCATCGTTGCCGAAATCATCTGCGCGGACGTTGTGAAA
TGATCGCCGACCAGTAGAGTATAGTAAAGAACTATACTTTTCGATTGAGA
CTGATGGCTCGTGGGTTCGAGCCCCAGCCGGAGCATGAGAATAGGGATGA
TATGCGACTCGCTCTCTGCATTCTGCATGGTAGGGAAAGTGCTGCTAAGG
GTAGAGGGGATTATATTCCGAGTGAAAGACGATCTTGGAGGCGGGGTTCT
TCGAACCCTCTCAACCGATACTTTCTTAGTTGGAAAAATAACAGTAGAAA
CGGCTCTGTGAGAAATGTAGGAGATTTTATTTTCCCATAGTTTCTAAACT
TAGGCTTAGGGGTTAGGCTGTGTCCACGTCAACTCTGGTATGTTGTATGT
TGAATGGGTCAACCATCGTCTTCGACCGTATGGAAAAAATACACCCTCAC
AATCAAAACAACTCCGATCGTTTAGCGCTGATTGGATGCTATCGGACACC
GGTAGATTATCGACGGCCTCCAAAGCGAGGGTTCCGTCCTTGCTGGCTCG
TGCGCGCCCATACCCAAGATAACACTAACCTGACGCTGACGCTTGCGGCT
GTGGTAGGTGGCAGACGTCCTGTTCAAGCATCTCAAGCTCCCTTCTCCTC
CGGTCAAGGTACGTAGTAGCCAAAGCAATGTAATGAAAGGAAAGCTCGGG
GCAAGAGGACGGGTAATAGAGAATTGACCGATTGACCGATCGATGGCGGA
AGGGTGGTTCTCATCGCATTTCATCTCCATCTGGGTACCGCACACAGAAG
ACCACGGGGGCGGGGGCGGGGGCGTTAATGTTTTTGTCTTGCGAGTGCCC
TGGGTCAGATATTGTTTTTGGGTCGGGTCGTGGATCATCGCCCCTGAATG
CCGTCGGCGCGCGCGTCTGGTTACATACCTCATGTGACCGATAATATCCC
ACCCCGCTGTATACATCCCACATTTTGGGAGTTGAAACCTATGAACCCTT
CCTTATTTTTCCCTACAAAAGAGTTATACCTGGTTGGGAAGGGCAGCGTC
GCAGTAGGTGGGATTGATAACCTAGTACGTTGAATGGCCCCATTTGAGAA
AAATAAAATAAAGCACCGGGTTGCTTAGTTCTGTACTACAAATGGAGGAG
AAGGGGGGGGGTTGATTTACGACTGGGCGTAGTAGGTATGGTATACAGTA
TATCCAGTCACCTAGGGTGCTTAGTAGCTTTTGATTTGGCGTTGGTGTTG
CGCAGGCGGGGAGCTTACGCGCCTCGACGTCGGCGGAGGTACTGGAAGGG
CTGCTGGGAAAGCATCCCGTGGTCGCCCCGGTCCTCGAGTTCCGTGGGGT
CAACAAGTACAAGACCACGTGAGAAGGATATATACACATGTATTGTTATC
ATTAAATATGTATTTTTAGGGCCGATGTAGCACGCGTGCAGCGTTGACAA
GAGTTACATGGCAGCGCGGGTGATGTTTGGCTGTGTTGTAGAGGTTGGCG
TAAGGGACCCGAAATGAACACAATATATAATTGAACTAGAGGGGATGGCT
TCTCACCATCGGGAGAGGGGTAAACCCGGTATCCCGCATATACATCCTCT
TGGTCGCACTGAATGTAATCTATCCACATCTAGGAGTTTCACTTTCTCAG
CCCCCTAGACGAACCCCTGCTTCCTCCTACTAGACTAGTATGACTCCCCG
GATTTGCACGTATGCGAGGATATCTGTACGATCCTCCTTCCGTACTCATC
ATATCCTCCCTAACTAACCTGTAGTTCCATGTATAGAGCAAGTACAGCCC
CCTGAACCTTACTATTGATATAGTCTCCTAAAACATACAAAATTACATTC
GAAATTAAATCAACCGAAACCTTATTCGAACTTAATATCAATCATCAAAA
TCTATTAAATTTCTGGAAACTTCAGCTAGACTATGCTAGTAACGAACGCA
ATATTAATTTACTACATCATCATTTTTCATCTAAACATTCGGCGAGTCGC
GAACGCTCTCGAAAAGCTTCTACATCTCGGATTAGTGTCCAGAAACATTC
TGTGAATCGCGAGTTTTGTCAAAATAGTAAAACGCCGGGCGATATCGGAA
AAAAATCGCGGTGACGGTGGTGGCTATTCCAGGGGAAAAACGTCTAAAAC
CTGAGAAAACAGCAACTATAAAGATAATAAAAACGGAGGCAGGCAGCGGA
ACGAACGAAGTAAATCTAGTCGGGGAACGTGCATTTCTTCAAAAGTAGCT
ATTCCAGCACTCTTGCAACATTCCTGTCGTCTCTCTCTCTTTCTCTCTCT
CAAACTGTCTAGAAGGGTGCAACATGGCACCTTCTAAGCTCTCCGCAGAC
GCTATTACCCAGGCTATTGCCTTACTGCTAGCCTCATCGCGCTACGAGAC
TTGGGCAGGAACCTATCATCTGAAATACCAAGGCAATTCTATTTCAGAGA
TTGTGTCACCCTTCAGACACTTTAGCGGAAGTAGGCACTAGCTGCGGAGA
ACAATGTTCTCCATGTTTTCCAGAGTTTTCGTTAGCGTATTTCAGATCAT
ATTTTTTTGTTTTGATCGCAAGTACTGAAGTCTGCTATTTTTTTCTAAAA
TTCTCATCTGAAGATTTCAGTCCATCCTGTTTTAGATTCGTAAGGGAAAA
TCCCTTCCCTCGTTATGGACGAGATTTTCTCAATCACAAGAAATTCCTAG
GCGGCTCAAGACAAGACTCAGGGACTCCACCCCACACACAGAGCCATTTC
CAAGGCAACACTTTAATAACACAAGCACAGGGGACATCGGGATAATCTCC
CGGAATATGGAAGCAACTTCAATATACTGTTTTTTTCTGAAAGTATACTA
AGATGAGAGGGGAAATACGATTTCATCACCAATAACTTGAGGGACTCTTC
TTATTCGTTGTTCTGCGTTTTCATGAGCACTGGACCTTCAATTACTTTAA
AAGACCAGGAATGGCATTCGCACGCAGCATTGGGAAGGGAAGCATACATA
AAATATGGACTGAACTGCCTGCATTGGTCTCTACAGAAATATGTCATACT
GCTGTATTGGAGAAACTAGAATGCTCCGGCCTTTACGATTAATTATACTG
TAATAAGACGTTGGGTAAAACTCAAATTATTATCCCTTGTCTCCGATTCA
TAGCCATTAATTCCTCCCTACATAAAAAACCACATAAGGCCTAAGACTTA
TTTTACGACCAATTTTTGATTTGTAAGTAATCGATCTCACTTCTGAGTAG
GGATAAAGCGGAGTCATTCACAAGCTGCTTAATTATCTACCTTCGTCAGT
AGGCACAGAAGCGCAAATCTCCAGCTCGATCGCCTTGGTCTTGGTCTGGG
AGAACACATCTTGGCCTCGAAGAACGATGGACGTCCTCGGCCAACGCTAG
AACCGTAGTCTTAGCTTTACAGGCGTAGGACGAACGACATTCTGGGGAAA
GGTTCCCGTGATCTTTAATCCTTCATTAGCATAATCATTAATATCAATAG
TTTGAGGGCCCATGTAGTACGCGTGCAGCGTTGGCAAGAATTACATGACA
GTGCGGGTAATTGTGGCTGTGTTGTAGAGGTTGATATAAGGGACCCGAAA
TGAACACAATATAACTGAATTAGAGGGAATGGCTTCTCCATCATCGGGAG
AGTTATAACCCCGATATCCCGCAAAGACATCCAACCGATGACGACGTAAA
TCTACGTATACATCCTATTGGTCGCACTGAATGTAATCTATTCGCATCTA
AGAGTATCACTTTCTCATATTATATACCCTCGTATAGAAGTCCGTACTAG
TCTGTAGATATTTACCTTCATGGGGTGTCCGATTCCTTTTCATGCTGTAT
ACTATTCGAAATTCATAGCCTAATTCAGCGCGGGCAGGGGACATGAGTAG
TAAGGCGTTTCGTGCTTGAGTGCAACCATGACCCTGCCCAAGGGTTGTGG
CCTCGATTTTCTGTACGCGGCGTGGTATGTGTATGTGTGTGTGCACGCGC
GCTGCACTCCCAACATATACATTTGACCTCGCCTATGCTACCAATACATT
TTACCCCCCCTTCCGAATTCAGAGTTCCAGGTGGAACCCATGACGGTCTG
TTACCACGGCGGCCGACAACCTCCCCCCTCCCCCCCGGCAATGCAACGCA
CGCAATAGGTACGTAGACAAGCTTTCAGAGAAGGCCGCGGGCGCGGCGTC
GACCGATAGCGCAGTGCCAGTGGCTAGAGGAGGTGCGGGCGCGGTCAGGA
TCCATGCGGCGTGGCATCAAACCTCGGTCAGGACGGGACGGCTGAGCTGC
TCGAGGCCGAACCTGCAGCAGGTGCGAGAGCCACCATGAACACGTCAGAT
CGACATCAAACGCATGAAAACGGACGCTGCTGCTACGGCACAACAACAAT
TCGTCGTTTCTATGTACGTAAGAGTTGTAGAAAAGGGCGACCGTACCGAT
AGCGGTGGGTTTTTTGGGGAAGATTGGGCGGGCGGATATGATCAAGCTGA
CCGCGGTCGTGTTTTATTCCCCAGGTTGGTTTGCCTTGCCAGCGCCGATG
ACTCTCGTCTCTCACTGCAAGCGTGTGATCGTTTTCTCCCTTGTATTCGA
GAGCGGACGGCGATCGTCGTAAAATATAAGAATGCTTGTGAGATGCCCCC
CCCCACCCTCATCCGATCCCCGCCCACGTCGAAGCAGATTCCGAAGAGCA
GCGACCCGCTGGCCGGGGTGGCGGGGGTGAATGTGCGGGACGCGTTCGTG
GCATCGAAGGGCTTCACTCTCATGGCGGCGGACTACAGCCAGATTGAGGT
ACTGTACGGCACAGCAAGCACGCAGCGTTGATTTGCCCCCCCTCTCCCTC
GTATAGGGTAGTCCATGCAGTTAGTCCTTGTGATGTGCCTTGTGAGCTCA
GAGACATCGGTCGATTAGTCTTGTCTCTCCCTAAAGGAGGAAACCTATCG
CTTTCTTTAGAATGTCTGCTGAATAAAGGATTGTTGGAAATCCCTACAGC
AACCCATTAACTTGTGAGCAGTACGCCACCGCCAGGAGTATTCACGAGTA
GATTATAGTCCGAGTGGATCACACACATATATCGTTGTCTAGGTTGTGTG
TGTGTGCGGCGCTCATGCGTTCGCGCTCCTTTGTGGTGTTTGGAGCATAG
CCACGCATGCTGAATGTGCCAACATCCAGTTACTGTACTTACCCGGTATG
TCCAATCAATCCATGGGTATATCCGGTTCGGCGTCGCAAAAGCAGCCTGA
CCGGCGTAATTCTGGCATATCGCTCCGTCTCGGCATTGTTGGAATGCGTG
GTCTATGGCCGTTAGGGTACGAGATGCGTGAACACAAGGACACCCATCTC
CCTTCCAAAACGTGATGGCTCATACTCTACAGCACAGTATTCGTAATTGT
GATGGGAAACATATAGTATCACAGGGAGGGTTGACACGTGTGCCGTCGAG
CTCTCGATAAGGTGAATCTGGCGTCGGAAGCGGGAATCCTAGGACATAGG
ATGCGAGGGTATGCACATTTATCTGAAAGCGGTTAGTGTTAAAAGAAAGC
GCTCGACAGGACGCCACGCGAATGAACACAAACCGTAAGCAACCGAGAGG
TTGTGCCTACTCGTACTACGATGAAGATGAAAAATTCATTCCCCTTGTCT
CGTCTCAACGCGTGTGCCCCGGCGATGTGGAACGCTCGCCGCCTCGTTTT
GCCCTCAAGATGCGAGTGCTCGCTGATGCCTGCGGAGACCCCGCTCTCTC
GGACATGTTTTCCTCGATTGGATGCAGGGGTGGGGATGTATACCGGAGAC
TGGCCGCCCAGGTCTGTGCTGATAATTGCGAGGGAGGAATCGCGTTGTTT
CTTGAATTGAGAGAATGGTTTTGCATGCCCAAGGCGTTTTTCTTTCCTCG
TTCGCCCGGACCAATCGTACCAATCCGATCTACTGTTGATTGTTCGATTG
CGTGTTTGCACTGTAAAGGTGTTCCGAAAAAAAGAAGGCGTTATCAGCGA
CCACGAGCGCACTCGAGCCAAGGTAGTCTGTCTGGGGATTATCTACGGTG
AGTCGAAGCTCCGCCTTTGTGGCGGTGTAATTGTGTAAGGCACGCTACGA
CTCGAGCCTTCTCATCCCTCTCGAAAAGACGCATTCTGCGTGGGATTCAC
ACGGCGACTCTCGAATGGAGCCTGTTCCGACATATCGGGTTGGCATGCTT
CGCTGTCCTGCTCCTGCTGTACCCAGGCTCTCGAAGGCCCTCCGAAGGCT
TTCCAAGAGCTTATTTTCCTGATGAAAACGGTTCGGGGTTTAGGTCTTAA
GTGGCCCCCGTCATTCCCAACTGTACACACCTCGCTCGTTCCACGCATAC
ACATAACCGTACACACACGACATATATATATATATATATATATATATATA
TAATATATATATATATATATATATATACGCAATATATATTAACCTTTCGC
ATTTTGGTCTACCGTTGGCTGCATCGGTAACGGTTACTGTTACGGTAGGC
ATGGGAACTCCTCAAGTAGCGCGAAAGCTGGAGGTGACGGAGAGCCAGGT
GCGAAGCACACAGCGCCGCTCTGGCGTTTGTTAGTATCCGATATTATATG
GCAACATATATGTTTATTCATTTATCACGACTATAATACCATTTTTTGCT
AAGGTGCGTGCAGCACTCTAGACAGCAAATCTGCTGTAGTCAGCAACCAT
TTATTCGGTTGGTTGTGTGAACGAGGGGGAGCGTGATGCTGTAGTCGAAT
GGATACCGTGGATGTGTTGTTCAGTTTGAACACACACAGTAAAAAAATCG
GTGTACCTCTTTCGGTCTTGTGTACCCCTTCCCCTTTTCTACTTTTCGTG
TTTAAAAAAAAATCTTCCTAGGCTCGAGCACTTTTGTGACCACGGGCTCT
AGATTTTTCTGAAAAAAACTAATGTGAGGAATCAGTCAATCAATCAATCA
ATCAATCAATCAACCAATCAAATGAATACCTAGTAAGACACTATGGCTGG
AGAGAGGAGAAAGAGCGAGAGAGAGAGGCAGGAAGGCTGTCCTCGGAGTG
AAAGAAGGGGTGGGGCTTCAGGACTCCTCGACCGAAAAGTTTGGGGACGG
ACGCTAACCACCTAGGTCAATCACCGCGGACGAGTCTGTCAGAAATGAAC
TACCTAGACCAATCAGCGCTGACTGATGATCTATCAATAGGTGGCTTATA
TATGGCAAGATAATATTGCAGGACATTGTAACGCGGTACAGTGCTATTGA
GAGTAACAGTACACTTGAAAAAGTATGTTATAACTGGTACAGTGCAGTAG
TGCGAGCAGTTAACAACGCGCCTGGCGAGCGTTTCTCCATCGAGGATCCA
CGCACGATGAGCGAACTACGCATGGCGCCAAGGTATCCCTGATTCGAAGT
GGAGCAATGGTTGCCTCCGTGCATACAGCCGAGATGGCGTAGTCACCGAC
CTGGCAATGGCGGCCGCTACCGCTGCCGTTGGCGCTGTCGTTGCCAGCTC
TCTCGCGGCCATTCCAAATCACGGCCGTTACGCACGGGTAACCGTAGAGC
AGCAGGGTGTTTTTGACCACCGGGATTCGTGTCTACGATACTGTATATTA
ACCCGTAAAGCTCGTTTGATAACGCCTCCTCCCGACCCCTTCCCCCTCTT
GCCCTACTCTTCTCCGCAACGGAGGAATTAAAAGCCAAACTCAAAACAGG
GCGACCTTGAAAACGCCCCTCGTCTTGAACCCTCATGCTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTCTCCCCCTTTTCCTTCTGTGCCTCCTCATCTCTTCTCCC
GGGAGGGGGGGGGGAGTGACATACGTCATACGTCTTTAAGGTACGATTTT
TGCGTGAACTTTCTTTCGGGATGATTGTCGCCCGATACTTACATATATAT
ATAATGTATAATATAATATATATGTTCTAATACCCGCGCGCGCGGAAACC
TGAAAAGGTATTAAGTAAAATACCCGCAACCATGTCTTTTGTCTAGAGTG
TTTCTTTTTTCAACGGCTGGACACTTGAGCGCTTTGAAAGCCCCCCCCCC
CCACTCGAGTAATTTTTTCTATGATGCTTATTTATTGCTTCATATACACC
TGTAGTAGTAGTGGTTCCGGTACAGTACTCGTCCGATGGGTCTTGCGCGA
TGCTTGCCTCTCGACGCAGGCCCAAGGACTGGTCCAATCGTTTCTGAGAG
CATTCCCCAAGATCGAGACCTTCTTGACTGCCACCAGGAGGTATCGCGCT
TGTTCCACGCCTAGTACATTTCATGCCTATTTCAGCGGCATGACGTACGC
GGGCGGCGCTCACTGCCTACCTTTCGAAACCATAGGGCACTTATAATACA
TCAACGGCATCCATGTTGCGCGATCCCTTCCGAAAGCCAAGGTAGACCGC
CGCGCTGGATTGCGCGAAAACACTGTGCTAAAGCGATCACATTCTCGCGT
AGCAGTATCGAAAAATATTATCGCGCTCTGCTTTGCTCCCAAATGGGGGG
GTGGATCACGGATCAGCCTATCTTACGGAAACCGGCGAGATACTGCTTTT
GTAGGCGATGCTTGCAGTAAAGGAAAAAACTTGTTAAGAGTTCAAACGTG
AATATTTCTGCCACCATAAGATGAGATATTTTGTTTGTTCGTCTTTCCCG
CGGGGAGCCGAACAGAATAACGGGGTTCGCCGCAGTCCCCCCCCCCCTCT
CTGTCCTCTTTCGAGTACAGTTGGAATAGGCGTGTAACTGGAAAGAGTAG
ACTAATGTGTCACCGCTTGATTTTCTCGGCAATAAACCACGACCAGCTGC
GGCAAACGCTGCTCAGGTTATGAAAATATTCTTCCAAGAAGGTTATTTTA
AAAGGCACGAACTTGGTTGGCGAAGTATTCATTTTTGATTGGGCTGTTGA
GTTACTAGGGGGGTGATCTCCGCTCCCCCCGGGGTCTCTAAATTATACTG
TATTTATAGGTATGATACTAATAATATACGTTTGTTAATAGCTCTATAAT
ATATAATAGTTGCTATACGTCCTCCGGCCGTACCGGAACCGTGCATGCTT
CGAAGCTTCGAACACGGCTTATTCGATGTGCCTCTCTCTGTCGCCGAAGG
TACGCGAGAGAGCGGGGCTACGTCTGTACCCTCACTGGAAGACGTCGTAA
CCTGTCCCAGATCATGAACTCCCAAAGCGCGGCGCTCAAGGCACAGGCCG
AGCGCCAGGCGGTCAATTCCGTCATTCAGGTTCGCGCGCATCGGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig5874:823..11169+

>mRNA_H-elongata_contig5874.13369.1 ID=mRNA_H-elongata_contig5874.13369.1|Name=mRNA_H-elongata_contig5874.13369.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2118bp|location=Sequence derived from alignment at H-elongata_contig5874:823..11169+ (Himanthalia elongata Himel1 dioecious)
ATGCCGGTGATCCCAGTCTTGGCGGCGATGGAGGTGTCCGGGGTTGTTTT
CCTGCCCGAGAGGGTCACTCGCTTTTCGGCGGCGCTAGGAGACCTGCTGG
AGGGACTGAGGCGGTCGGCGGTGGCCGCGGCCGGGAACAGAGGCTTCAAC
CTCGCTTCTCCTGATCAGATGCCGGTGATCCCAGTCTTGGCGGCGATGGA
GGTGTCCGGGGTTGTTTTCCTGCCCGAGAGGGTCACTCGCTTTTCGGCGG
CGCTAGGAGACCTGCTGGAGGGACTGAGGCGGTCGGCGGTGGCCGCGGCC
GGGAACAGAGGCTTCAACCTCGCTTCTCCTGATCAGGTGGCAGACGTCCT
GTTCAAGCATCTCAAGCTCCCTTCTCCTCCGGTCAAGGTGGCAGACGTCC
TGTTCAAGCATCTCAAGCTCCCTTCTCCTCCGGTCAAGGCGGGGAGCTTA
CGCGCCTCGACGTCGGCGGAGGTACTGGAAGGGCTGCTGGGAAAGCATCC
CGTGGTCGCCCCGGTCCTCGAGTTCCGTGGGGTCAACAAGTACAAGACCA
CGCGGGGAGCTTACGCGCCTCGACGTCGGCGGAGGTACTGGAAGGGCTGC
TGGGAAAGCATCCCGTGGTCGCCCCGGTCCTCGAGTTCCGTGGGGTCAAC
AAGTACAAGACCACGTACGTAGACAAGCTTTCAGAGAAGGCCGCGGGCGC
GGCGTCGACCGATAGCGCAGTGCCAGTGGCTAGAGGAGGTGCGGGCGCGG
TCAGGATCCATGCGGCGTGGCATCAAACCTCGGTCAGGACGGGACGGCTG
AGCTGCTCGAGGCCGAACCTGCAGCAGGTACGTAGACAAGCTTTCAGAGA
AGGCCGCGGGCGCGGCGTCGACCGATAGCGCAGTGCCAGTGGCTAGAGGA
GGTGCGGGCGCGGTCAGGATCCATGCGGCGTGGCATCAAACCTCGGTCAG
GACGGGACGGCTGAGCTGCTCGAGGCCGAACCTGCAGCAGCAGATTCCGA
AGAGCAGCGACCCGCTGGCCGGGGTGGCGGGGGTGAATGTGCGGGACGCG
TTCGTGGCATCGAAGGGCTTCACTCTCATGGCGGCGGACTACAGCCAGAT
TGAGCAGATTCCGAAGAGCAGCGACCCGCTGGCCGGGGTGGCGGGGGTGA
ATGTGCGGGACGCGTTCGTGGCATCGAAGGGCTTCACTCTCATGGCGGCG
GACTACAGCCAGATTGAGATGCGAGTGCTCGCTGATGCCTGCGGAGACCC
CGCTCTCTCGGACATGTTTTCCTCGATTGGATGCAGGGGTGGGGATGTAT
ACCGGAGACTGGCCGCCCAGATGCGAGTGCTCGCTGATGCCTGCGGAGAC
CCCGCTCTCTCGGACATGTTTTCCTCGATTGGATGCAGGGGTGGGGATGT
ATACCGGAGACTGGCCGCCCAGGTGTTCCGAAAAAAAGAAGGCGTTATCA
GCGACCACGAGCGCACTCGAGCCAAGGTAGTCTGTCTGGGGATTATCTAC
GGTGTTCCGAAAAAAAGAAGGCGTTATCAGCGACCACGAGCGCACTCGAG
CCAAGGTAGTCTGTCTGGGGATTATCTACGGCATGGGAACTCCTCAAGTA
GCGCGAAAGCTGGAGGTGACGGAGAGCCAGGCATGGGAACTCCTCAAGTA
GCGCGAAAGCTGGAGGTGACGGAGAGCCAGGCCCAAGGACTGGTCCAATC
GTTTCTGAGAGCATTCCCCAAGATCGAGACCTTCTTGACTGCCACCAGGA
GGCCCAAGGACTGGTCCAATCGTTTCTGAGAGCATTCCCCAAGATCGAGA
CCTTCTTGACTGCCACCAGGAGGTACGCGAGAGAGCGGGGCTACGTCTGT
ACCCTCACTGGAAGACGTCGTAACCTGTCCCAGATCATGAACTCCCAAAG
CGCGGCGCTCAAGGCACAGGCCGAGCGCCAGGCGGTCAATTCCGTCATTC
AGGTTCGCGCGCATCGGTAGGTACGCGAGAGAGCGGGGCTACGTCTGTAC
CCTCACTGGAAGACGTCGTAACCTGTCCCAGATCATGAACTCCCAAAGCG
CGGCGCTCAAGGCACAGGCCGAGCGCCAGGCGGTCAATTCCGTCATTCAG
GTTCGCGCGCATCGGTAG
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