mRNA_H-elongata_contig58680.13357.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58680.13357.1
Unique NamemRNA_H-elongata_contig58680.13357.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.590e-76
Identity = 136/303 (44.88%), Postives = 199/303 (65.68%), Query Frame = 1
Query:  604 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP*RIFPCLANGAMRIVVNGHDDDEFLSPTQGMHVTDG-IELS*SNLPLVCQEFNQQAAWASIKKTDVSTTRRLK-ELTFEEWILKMAN-MVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 1494
            CP G +VC DPH   L+GQ+++W GVDGGWYSL++D   D++INVR TA    +FP +QL+T +A+LS GHS+VIEV+ P+T  T  CP  + PCLANG +RI+V+    DE L  ++ + V DG + +S SNLP+ CQ+F     WA + +  +   R L  + + EEWILK  + M  P  C  +I  + L  +QS  +IF+I T T  VRL++GV+++ N     +GRV+P+LEFW+M VG++G  + +  LSGLL ET+R ++ + G+ +M+  +A RG +EDYRVSD+L   F LL +
Sbjct:  105 CPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDE 407          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 3.190e-75
Identity = 135/306 (44.12%), Postives = 201/306 (65.69%), Query Frame = 1
Query:  595 ITDCPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP*RIFPCLANGAMRIVVNGHDDDEFLSPTQGMHVTDG-IELS*SNLPLVCQEFNQQAAWASIKKTDVSTTRRLKE-LTFEEWILKM-ANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 1494
            + D  +   +  DPH   L+GQ++NW GVDGGWYSL++D  ADL INVR TA    +FP +QL+T +AI+S G+S+VIEV+ P+T  T  CP  + PCLANG +RI+V+G + DE L  ++ M V DG + +S SNLP+ C++F     WA + +  +   R+L+   + EEWIL+   NM   R C  +I  + L  +Q+  +IF+I T T  VRL++GV+++ +     +GRV+P+LEFW+M VG++G  + +  LSGLL ET+R ++ + GE +M+ ++A RG VEDYRVS +L   FALL +
Sbjct:    3 VDDDDNADDMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDE 308          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 3.070e-68
Identity = 127/307 (41.37%), Postives = 190/307 (61.89%), Query Frame = 1
Query:  595 ITDCPDGVSVCKDPHQLQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAK-CP*RI-FPCLANGAMRIVVNGH---DDDEFLSPTQGMHVTDGIELS*SNLPLVCQEFNQQAAWAS-IKKTDVSTTRRLKELTFEEWILKMANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 1494
            +T C D  +V      L GQ ++W G+DGGWYSL++D   DL++NVR TA    +FP +QLVTG+++++GGHS+VIEV +P+ TDTA  CP     PCLANG + ++V+G    DD   L   +   +  GI++S +NLP+ C +F      A     T +   R L   TFEEW+L   +M     C  +I +  L  VQS Q+I++I+T   +VR + G+ H+     E +GR++P+L+ WEM VG+ G +L+++ L+G+L ET+R +  ++G  +MK   A RG  EDYRVS +L TDFALL++
Sbjct:   51 LTGCTDTYAV------LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQ 351          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 5.140e-68
Identity = 125/302 (41.39%), Postives = 188/302 (62.25%), Query Frame = 1
Query:  604 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAK-CP*RI-FPCLANGAMRIVVNGHDDDEFLSPTQGMHVTDGIELS*SNLPLVCQEFNQQAAWASIKKTDVSTTRRLKELTFEEWILKMANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRN-NRTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 1494
            CP G  +C DPH   L GQ ++W GVDG WYS ++D   DL +NVR TA    DFP +QLVTG++++S GHS+V+EV  P++TD    CP     PCLANG + + V+G  +   + P +G  +  GIE+S  NLP+ C +F     WA   +  +   R+L+  +FE+W+L   +M     C  +I   GL GVQS  +I++IVT   +VRL+ G+ H++ +  + +GRV+P+L+ W+M VG+ G +L+++ L+G+L ET+R ++ + G  +M   +A RG  EDYRVS  L  DFALL +
Sbjct:  395 CPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEA-ILARRKLRAQSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQ 695          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.690e-64
Identity = 125/305 (40.98%), Postives = 184/305 (60.33%), Query Frame = 1
Query:  595 ITDCPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP*RIFPCLANGAMRIVVNGHDDDEFLSPTQGMHVTDGIELS*SNLPLVCQEFNQQAAWASIKKTDVSTTRRLKE-LTFEEWILKM-ANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 1494
            + D  +   +  DPH   L GQ+VNW G DGGWYSL++D  ADLHINVR TA    +FP +QL+T +AI+S G+S+VIEVK P+TTDT  CP  + PC ANG +RI+V+GH+ DE L  ++ M                      +  WA + +  +   R+L+   + EEWIL+   NM     C  +I  + L  +Q+  +IF+I T T  VRL++GV++++N     +GRV+P+LEFW++ VG++G  +    LSGL  ET+  ++ + G+ +M+  +A RG VEDYRVS +L   FALL +
Sbjct:    8 VDDDDNADHIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELLRFSRQMP-------------------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDE 293          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.240e-45
Identity = 109/305 (35.74%), Postives = 162/305 (53.11%), Query Frame = 1
Query:  610 DGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSG-GHSIVIEVKEPHTTDTAKCP*RIFPCLANGAMRIVVNGHDDDEFLSPTQGMHVTDG-IELS*SNLPLVCQEFNQQAAWAS--IKKTDVSTTRRLKELT-FEEWILKMANMVVPRRCLNFIHNH---GLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNNRTETNGR--VIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALL 1488
            D   V  D H   L GQ+++W G D GWY LL +  ++  +N R TA    +FP +QLV+GV+I S  G S+V+EVK P TT+T  C     PCLA GA+RI+V+G +     SP + + +  G + +S +NLP  C+ F     WA+      D S  R L+  T F +W+L+   M  P  C  F       GL  VQS ++I R+ T    VR+  GV+++++   ++G   ++PEL+FW+  +           L G+L +T+R +    G+PI     A+RG VE  RVS  L  DF  +
Sbjct:    3 DDPQVSGDSHMVGLLGQEIDWYGEDSGWYCLLVN--SEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFE-ELRPSGELGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQM 304          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 1.300e-24
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 1
Query:  613 GVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTD-TAKCP*RIF-PCLANGAMRIVVNG 918
            G  +C DPH   L+GQ ++W GVDGGWY+ ++D   DLH+NVR TA    +FP++QLVTG+++++G HS+++EV  P+ TD    C   +  PCLANG + + VNG
Sbjct:    4 GTDICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTDINGGCLDGMSTPCLANGGLSVTVNG 109          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5KHZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 6.680e-16
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:  604 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAI----------------------LSGGHSIVIEVK 831
            CPDG ++C DPH   L GQ ++W GVDGGWYS +RD   DL++NVR TA    +FP +QLVTG+++                      ++ GHS+VIEV+
Sbjct:   34 CPDGTNLCLDPHMKGLFGQNIDWFGVDGGWYSFVRDPDIDLNVNVRLTAPLPEEFPDRQLVTGLSVVXXXXXXXXXXXXXXXXXXXXXMARGHSLVIEVR 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JS96_9PHAE1.590e-7644.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW2_ECTSI3.190e-7544.12Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JP35_9PHAE3.070e-6841.37Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE5.140e-6841.39VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP37_9PHAE1.690e-6440.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE2.240e-4535.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E8_ECTSI1.300e-2447.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHZ2_9PHAE6.680e-1643.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58680contigH-elongata_contig58680:122..3500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size2461
Cds size465
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58680.13357.1prot_H-elongata_contig58680.13357.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58680 524..1906 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930951.0179198-UTR-H-elongata_contig58680:121..5231622930951.0179198-UTR-H-elongata_contig58680:121..523Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58680 122..523 +
1691679637.748015-UTR-H-elongata_contig58680:121..5231691679637.748015-UTR-H-elongata_contig58680:121..523Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58680 122..523 +
1622930951.0817022-UTR-H-elongata_contig58680:1906..35001622930951.0817022-UTR-H-elongata_contig58680:1906..3500Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58680 1907..3500 +
1691679637.7828817-UTR-H-elongata_contig58680:1906..35001691679637.7828817-UTR-H-elongata_contig58680:1906..3500Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58680 1907..3500 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930951.031827-CDS-H-elongata_contig58680:523..5681622930951.031827-CDS-H-elongata_contig58680:523..568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 524..568 +
1691679637.7566772-CDS-H-elongata_contig58680:523..5681691679637.7566772-CDS-H-elongata_contig58680:523..568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 524..568 +
1622930951.0453343-CDS-H-elongata_contig58680:803..9571622930951.0453343-CDS-H-elongata_contig58680:803..957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 804..957 +
1691679637.7649431-CDS-H-elongata_contig58680:803..9571691679637.7649431-CDS-H-elongata_contig58680:803..957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 804..957 +
1622930951.0599253-CDS-H-elongata_contig58680:1640..19061622930951.0599253-CDS-H-elongata_contig58680:1640..1906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 1641..1906 +
1691679637.773577-CDS-H-elongata_contig58680:1640..19061691679637.773577-CDS-H-elongata_contig58680:1640..1906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58680 1641..1906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58680.13357.1

>prot_H-elongata_contig58680.13357.1 ID=prot_H-elongata_contig58680.13357.1|Name=mRNA_H-elongata_contig58680.13357.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
MLDPDEGTCCGMCSQVALNDEIVRLLVSDASNSTGGMLNPGIPEQNNIDI
IIIVRMLIIYMDLTITDCPDGVSVCKDPHQLQGQQVNWPGVDGGWYSLLR
DKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDT
AKCP*
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mRNA from alignment at H-elongata_contig58680:122..3500+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58680.13357.1 ID=mRNA_H-elongata_contig58680.13357.1|Name=mRNA_H-elongata_contig58680.13357.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3379bp|location=Sequence derived from alignment at H-elongata_contig58680:122..3500+ (Himanthalia elongata Himel1 dioecious)
TATCAGTGAGGGTTTCACCACCCTAAAAGACGTAAAAACAATGTATGACA TCATCCATCCATAGAGCTATGGCAATGGTATTTTTAGCCGATTTGAGCCC CCACCAGCCTATCTGCAGCTGTACGACGGGGGAGCAGCACATGGACACGG TCTCAAGCCTAGCACACTCTGTTGACGTTTGTGCAAATTCCCAGTAGAAA CCCTCTTTCATTTCTCTGTTCCACCAATTTACAAGAGTACCCCGTTTGAG AAGTTACCACACATAAGCCCCTAATATATCAAAACATTCACAGCTTTTTT GAACGACTATCACGCTTAGAGTTGCCTCTCATAAACGCCTTGTTCATATC TTGAATTGCTAGCTTCACGCCGAATTCAGGACATGCCGACGCTTTTCACC GAATGCTGGACCCCGACGAGGGAACTTGCTGCGGGATGTGCAGCCAGGTG TGTACATCCAACGACGTACTCGGTGCGGGAATACAAATAAGAATATCATA ACGATATAATACATATATATATATATATATATGAACACGGAGCTACCTAC GCAGATTAAACGGCGAGCTTACTTCATAGTAGTCATGTCCTACTACATGC AAAGAAAAACGTCGCATTCGACCTTCTTTTCCCTGTCGTTTTTTGTGCTT GACATTTTTCGTCGATTGCGCTTTCTCTTTAGGTGGCACTCAACGATGAA ATCGTGAGACTTCTCGTCTCTGATGCTAGCAATAGCACCGGAGGTATGCT AAACCCTGGCATACCCGAGCAAAACAACATCGACATCATCATTATCGTCC GCATGCTTATTATCTACATGGACCTCACGATCACAGGCAACCCTATCATG ACCAAAGCTTTCGAGGTCAAAGTTTTGACTGGACACTGGAAGACGCCTTG TAGCTACACCCGAATGAACTGCATTGTGTTTGAGAACGACGATATTCGCA TGGTTGCCCCGCCATTCCCCGGGGGCTTGGCGATTGTCAGCATTCCAGAT GTGGCCACGTTCACGGCTGATTCTAACGTTAGCGTCCTTAGTAGTAGCTG TGATCTACGCTGCGATAGCGAAGATGCGTGTGACCCTTTCGAGACGAACG TGGGCGATCTCATCGTCGAGGGCATGGGAATACCATTCGGTGAACTTCAT ACTTCCCAGTTCATCGCCGGCTTTTGCCAAATTGAGTTAGTGTCATAAAA CCTTAATCCAGGCAAAGATTGCTAAGCAAAGATCTAACTGTATGTTCAGT GACAAGTGACAATGTGCCTCCTTTTATTTTGGCGTTTTATAATGTTGCAA TGCAGAGTGTATTCCAGGGAAAGCATTTTCAGTTGCAGGAATGAGCATAT GGTAAAGGTTGTAAAAATGCTTCACAGCCAAAACGTTTAAGGTGAACAAG AAATCTGCCGGGTAGTTGACTGGGTAATTGCATCAAAAACTATTACTGTA CTACTTCGTAGTATATTTGACTCGCGTCACAACTCGATTTCCCTTTTCCA CGGCCCATTTTCCATGCAGATTGCCCGGATGGTGTAAGTGTGTGCAAGGA CCCACACCAGCTTCAAGGGCAGCAGGTTAACTGGCCTGGAGTTGACGGCG GCTGGTATTCCCTGCTCAGAGACAAAATCGCTGATCTCCACATCAACGTG CGCACAACCGCTTCTCATTCCATCGATTTCCCGAAACAACAGCTTGTAAC GGGCGTCGCCATCCTATCAGGAGGACATTCAATTGTGATCGAGGTGAAAG AGCCGCATACAACGGATACCGCCAAATGTCCTTAAAGAATATTTCCTTGC CTAGCGAACGGGGCAATGCGTATCGTCGTGAACGGGCATGATGACGATGA ATTCCTCAGTCCTACGCAGGGCATGCACGTGACCGACGGCATTGAACTAT CATAATCTAATCTACCGCTGGTGTGCCAGGAGTTCAACCAGCAAGCAGCT TGGGCAAGTATCAAGAAAACCGACGTAAGCACCACACGACGCCTCAAGGA GTTAACTTTTGAAGAATGGATTCTAAAGATGGCGAACATGGTAGTGCCGA GACGTTGCTTGAATTTCATCCACAACCACGGCCTATTTGGTGTACAGTCC AGACAATCTATCTTCAGGATTGTGACCTCCACTGCCATCGTTCGTCTTAG CTCTGGAGTGAGCCACAGGAACAATCGAACCGAGACGAACGGACGCGTGA TTCCGGAGTTGGAATTCTGGGAGATGAGTGTCGGGGTAAACGGCCCTACG CTACAGCACGATAATTTATCGGGTCTTCTGACCGAGACATCAAGGGTAAT GCACATAAAATACGGCGAGCCTATTATGAAGGATGCGAATGCCATACGCG GCAGAGTCGAAGACTACCGCGTCTCTGACTCTCTGTCCACCGATTTCGCC CTGCTTCAGAAAAACGCCGATTAAAGAGGCGCCCGGGCACCAGATGATAC CGCCTAAAAGGGCTATCGGTAGTCTACTGAGTTCTTCAGCAATCGAACTG AGAGCTCATACTAAAATGCAAGGATATTTCTACTCATGATGGCATTTGTA ATGACGCCCGATGAGGATATAGCTCTTGCACAACGCCTTATACGGTGAAA TTGGGCGGATGAAACCAACGGGCGAGTGGGTTTTGTAGGAGATAATATAG TTGAGGGCAAATGAATTGTCAATAAACGATCTATACATAGAACAAGACGT TGGGTGAGCAATCCGAGCAGCATCGATGCAGCCCTCAACCAAACAAGTTT AATCCACGTCGTTACATATCTATCCAAGTCGTGCTTATCTTGAGGGTTGG CTTATCAAGTTTCGTGACTGTGCGTATAATGATGAGCCATCGTTTCTATG CCACTTCTGAAGTATACACACCCGTGGTATGATGTGGTCTCCACCTTCTT CGGTTCCTAAATCTCTCGAATATCGGTTTGGCCTTGGGTTTGATTTGACT TTGATGAGAAGCTATATGCCTCGCGCATTGATGATAAAGCTATATACGGA AAAACCGCGAGACGTGTGTCACCTATGGACTGCCTAGCATATATTTGCAT GCAATGTGTAGTGAAGTCATCAGTCAAAGTGTTACTTACGGTCTATAAAA CTAAGAACGAGGAATGAATAAGCCGGGCTTCAATCTGGGGGTGAGTTCTA TTTATCGGGTAATTTATATACCAGGTAGTCTATCGGCTCATGGTCGAAAT CCGGTTGCTGCTAGAATATATATAAATATATTGGTACTATCTACGGCTTC GAGAGAAATCATAACTTGACCAGCCATGCAAGAGAATTGAGAAGGCAACT AGGATATTTGCATAGTGCGTGTCAAGCGGACTGTTATGGGGAGTAGCATG TACTTGAAAGCGATCACACTATAATACAC
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Coding sequence (CDS) from alignment at H-elongata_contig58680:122..3500+

>mRNA_H-elongata_contig58680.13357.1 ID=mRNA_H-elongata_contig58680.13357.1|Name=mRNA_H-elongata_contig58680.13357.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig58680:122..3500+ (Himanthalia elongata Himel1 dioecious)
ATGCTGGACCCCGACGAGGGAACTTGCTGCGGGATGTGCAGCCAGATGCT
GGACCCCGACGAGGGAACTTGCTGCGGGATGTGCAGCCAGGTGGCACTCA
ACGATGAAATCGTGAGACTTCTCGTCTCTGATGCTAGCAATAGCACCGGA
GGTATGCTAAACCCTGGCATACCCGAGCAAAACAACATCGACATCATCAT
TATCGTCCGCATGCTTATTATCTACATGGACCTCACGATCACAGGTGGCA
CTCAACGATGAAATCGTGAGACTTCTCGTCTCTGATGCTAGCAATAGCAC
CGGAGGTATGCTAAACCCTGGCATACCCGAGCAAAACAACATCGACATCA
TCATTATCGTCCGCATGCTTATTATCTACATGGACCTCACGATCACAGAT
TGCCCGGATGGTGTAAGTGTGTGCAAGGACCCACACCAGCTTCAAGGGCA
GCAGGTTAACTGGCCTGGAGTTGACGGCGGCTGGTATTCCCTGCTCAGAG
ACAAAATCGCTGATCTCCACATCAACGTGCGCACAACCGCTTCTCATTCC
ATCGATTTCCCGAAACAACAGCTTGTAACGGGCGTCGCCATCCTATCAGG
AGGACATTCAATTGTGATCGAGGTGAAAGAGCCGCATACAACGGATACCG
CCAAATGTCCTTAAATTGCCCGGATGGTGTAAGTGTGTGCAAGGACCCAC
ACCAGCTTCAAGGGCAGCAGGTTAACTGGCCTGGAGTTGACGGCGGCTGG
TATTCCCTGCTCAGAGACAAAATCGCTGATCTCCACATCAACGTGCGCAC
AACCGCTTCTCATTCCATCGATTTCCCGAAACAACAGCTTGTAACGGGCG
TCGCCATCCTATCAGGAGGACATTCAATTGTGATCGAGGTGAAAGAGCCG
CATACAACGGATACCGCCAAATGTCCTTAA
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