mRNA_H-elongata_contig58611.13352.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: D8LGR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR6_ECTSI) HSP 1 Score: 304 bits (779), Expect = 4.570e-101 Identity = 142/172 (82.56%), Postives = 158/172 (91.86%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVRMK 516
+Y ALR+G FADVYEWLTASHLEK D T+ALASAE+ANEIFVGWGRPYGHYARVLA+MDRREMEA+D+AKVSLRCPCWTI+P ++LEEVVKIAGYEDM SV TMYEGMAA+EQ DKINEGK PMQVALDRAAHLMD+V FG K WD +R+ELAERYDQGGIP+IARFVRM+
Sbjct: 205 KYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRME 376
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A836CI50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI50_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.420e-65 Identity = 95/171 (55.56%), Postives = 125/171 (73.10%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVRM 513
RY L++ PF D+Y+WL +HL K D SALA+AE+ NE+F+GWG PY YA+VLA M R+ EA+D+AKVSLRCPCWTI ELE V +IAGY DMG V +Y+ +A + Q K EGK P Q+ALDRAAH+MD+V+FG + WDS+R LA+ Y + G+PE+A FV++
Sbjct: 155 RYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 325
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: H6WBA3_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA3_VAULI) HSP 1 Score: 178 bits (452), Expect = 5.490e-52 Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVR 510
++ L IGPF D+Y WL SHL + D SAL +AE+ NE+F GWG PY Y++ L+RM R +EARD+AKV++RCP WT+ EL+ + ++ GY + V ++ MA + Q DK NEGK+P+Q+ALDRAAH+MD+VV G W +R+EL Y + G+ +A FVR
Sbjct: 185 KFQLLNIGPFPDLYVWLVNSHLSRGDEISALTAAEKFNELFPGWGYPYAFYSKTLSRMKGRHLEARDAAKVAMRCPLWTLTLDKAELKSIFELGGYGNEIDVEVLHRRMAEDVQEDKKNEGKQPVQIALDRAAHVMDAVVVGRGTWGDVREELYGLYKEAGMSHLAEFVR 354
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A2V3IY10_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY10_9FLOR) HSP 1 Score: 149 bits (377), Expect = 6.860e-41 Identity = 73/170 (42.94%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVR 510
R+ L++GPF D+YE L H K D SAL + ER+ GWGR + +A L + R EMEARD+A+ L+ P WTI +E L ++ +AGYED S+C +Y+ + +++ +I +GK P QVALDRAA+L+D GW+SI+++LA YD+ +P+ A FVR
Sbjct: 178 RFLILKVGPFPDIYEGLVEFHKAKGDTQSALITCERSANAHPGWGRAHAFHANFLRELGR-EMEARDAARFCLQMPLWTIG-SVETLLDMASLAGYEDSTSLCKIYKRLYEDDRKQEIADGKAPQQVALDRAAYLLDVCFTDGSGWESIKEDLAALYDEADMPDFATFVR 345
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A7S3EKV4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKV4_9RHOD) HSP 1 Score: 143 bits (361), Expect = 1.070e-38 Identity = 74/170 (43.53%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVR 510
RY L+IGPF D+YE LT H K D SAL AER+ F GW R + +AR+L R +R EARD+A+ +L+ P WT+ L+E+ + IAGY+D S+ +++ +A +E+ ++I +GK QVALDRAA+LMD WD I+DELA Y++G + + A F++
Sbjct: 161 RYVILKIGPFPDIYEGLTRFHEIKGDMQSALVCAERSGVAFPGWARGHCFHARLLQRFNRNS-EARDAARYALQLPLWTLGDSLQEMGQ---IAGYQDETSLQKIFKRLAEDERENEIKDGKPKEQVALDRAAYLMDYTYAAGGSWDEIKDELAALYNEGMVTDSASFLK 326
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A7S0BCX9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCX9_9RHOD) HSP 1 Score: 138 bits (347), Expect = 1.890e-38 Identity = 70/166 (42.17%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 13 LRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVR 510
L++GPF D+YE LT H K D SAL AER+ F GW R + ++R+L R +R EARD+A+ +L+ P WT+ L+E+ + IAGY+D S+ +++ +A +E+ ++I +GK QVALDRAA+LMD WD I+DELA Y +G + + A F++
Sbjct: 3 LKVGPFPDIYEGLTRFHEIKGDTQSALVCAERSGVAFPGWARGHCFHSRLLQRFNRNS-EARDAARYALQLPLWTLGDSLKEMGQ---IAGYQDETSLQKIFKRLAEDERENEIKDGKPKEQVALDRAAYLMDYTCAAGGSWDEIKDELAALYSEGMVTDSASFLK 164
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: W7U1F2_9STRA (Cyclin delta-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1F2_9STRA) HSP 1 Score: 139 bits (351), Expect = 6.960e-37 Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 1 RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKG---WDSIRDELAERYDQGGIPEIARFV 507
RY L++G F DVY++LT H+ K D SAL +AE+A F GWG+PY Y R+L M RE+E RD+A +LR P WT+A +LE V+ A + + +E+ ++ +GK P QVALDRAA+LMD+ + G G W +R LAE Y + G+ E+A FV
Sbjct: 191 RYLFLKVGSFPDVYKFLTEFHMSKGDQASALVTAEKAYNTFNGWGQPYMEYCRLLQGMKGRELEMRDAAFAALRTPLWTVADDDGDLEMVLN-AAKSSREKAADKFWKLYEDERLQEVKQGKLPEQVALDRAAYLMDAALVGGNGIRSWSDVRPPLAELYREAGMRELADFV 361
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A7S0ZC14_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC14_9RHOD) HSP 1 Score: 132 bits (331), Expect = 5.740e-36 Identity = 68/173 (39.31%), Postives = 108/173 (62.43%), Query Frame = 1
Query: 4 YHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVF--GDKGWD-SIRDELAERYDQGGIPEIARFVRM 513
Y L++G F DVY+ T HL+ ED S L + E+ F GWG + + AR+L ++ R E+EARD+A+ ++ P WT+ + L E+ KIAGY+++ S+ M+ G++ + + ++ +GK QVALDRAA+++D VV DK W +++ELA Y +PEIA+FV +
Sbjct: 2 YLLLKVGAFPDVYQATTERHLKNEDEQSGLITVEKMASSFPGWGYSHAYNARLLLKLGR-ELEARDAARFAIHLPLWTLD---DSLSEIAKIAGYQEVESLKKMFRGLSLDPRDSEVAQGKAVEQVALDRAAYVLDRVVAEDDDKRWSREVKEELAALYGIARLPEIAKFVSL 170
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: M2W4P0_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4P0_GALSU) HSP 1 Score: 118 bits (295), Expect = 1.070e-28 Identity = 63/166 (37.95%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 19 IGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDM-GSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVRM 513
IGPF D+YE LT HL++E SAL + E+A F GWGR ++ VL +++R + EARD+A+ +L+ P WT+ ++ +V +AG++ S +Y +A +++ I GK QVALDRAA L+D + + I+D LA+ Y++ +P++ARFV +
Sbjct: 199 IGPFPDMYEKLTYKHLQREKTQSALITCEKAAVSFPGWGRSRYFHSCVLQKLNRMQ-EARDAARAALQLPLWTLN---YDVFQVGYVAGFQSPESSFPQIYRKLANDKRYKDIENGKPKEQVALDRAAFLLDVTFLENNSYQDIKDSLAQLYEEAHLPDVARFVAL 360
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Match: A0A388LIN2_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LIN2_CHABU) HSP 1 Score: 119 bits (298), Expect = 2.600e-28 Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 1
Query: 4 YHALRIGPFADVYEWLTASHLEKEDYTSALASAER--ANEIFVGWGRPYGHYARVLARMDRREMEARDSAKVSLRCPCWTIAPGLEELEEVVKIAGYEDMGSVCTMYEGMAANEQADKINEGKEPMQVALDRAAHLMDSVVFGDKGWDSIRDELAERYDQGGIPEIARFVR 510
Y ++ F DV E L HL++ D+ SAL +AE + + F G+GRP+G A + R+ R EA+D+A+V+LRCP WT+ EE+ + IAGY D + + E + + + I +GK P QV+LD+AA L+D+ + WD +RD+L + Y G+ +++ F+R
Sbjct: 356 YLTRKVALFPDVLERLALGHLDRGDHVSALVAAEFYCSRKHFPGFGRPFGFNAELFVRIGRLA-EAKDAARVALRCPWWTLGSSFEEMAD---IAGYSDE-RIELLKERLTEEARQEDITKGKSPEQVSLDQAAFLLDTAA-AEGNWDDVRDQLGDLYKHAGLTDLSNFIR 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58611.13352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58611.13352.1 >prot_H-elongata_contig58611.13352.1 ID=prot_H-elongata_contig58611.13352.1|Name=mRNA_H-elongata_contig58611.13352.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp RYHALRIGPFADVYEWLTASHLEKEDYTSALASAERANEIFVGWGRPYGHback to top mRNA from alignment at H-elongata_contig58611:1712..3483- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58611.13352.1 ID=mRNA_H-elongata_contig58611.13352.1|Name=mRNA_H-elongata_contig58611.13352.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1772bp|location=Sequence derived from alignment at H-elongata_contig58611:1712..3483- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58611:1712..3483- >mRNA_H-elongata_contig58611.13352.1 ID=mRNA_H-elongata_contig58611.13352.1|Name=mRNA_H-elongata_contig58611.13352.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at H-elongata_contig58611:1712..3483- (Himanthalia elongata Himel1 dioecious)back to top |